NO18G00340, NO18G00340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00340 vs. NCBI_GenBank
Match: XP_005833744.1 (hypothetical protein GUITHDRAFT_70395 [Guillardia theta CCMP2712] >EKX46764.1 hypothetical protein GUITHDRAFT_70395 [Guillardia theta CCMP2712]) HSP 1 Score: 165.2 bits (417), Expect = 2.800e-37 Identity = 98/203 (48.28%), Postives = 126/203 (62.07%), Query Frame = 0 Query: 78 LPSPSRALVKGNAPPKDM-RKKSGGKPATANMDEAMEMGRKKEQEMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSPSVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDAMEVTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGWFKGKGCGVLDDADVSNLAAAFIVPGTKITDTEDCLDLTRIP 280 LP ++ALVKG APP D +KK N+ EA E G ++E +FDKQ+ + T EGDRYRD + V K G I+YR LRLGKRSRDGLSGEAS VFSYGYGEDDDKE D ++ +G++NLI AL + L GM+ GG RR+ V+PERGW K + + D+ +A +PG +T+ E CLD R+P Sbjct: 6 LPPNAQALVKGIAPPPDFGKKKDLPTKKITNIQEAQEYGAQREATLFDKQD----GNFSVTKEGDRYRDVRIGTGAEV--KPGSEVEIKYRVLRLGKRSRDGLSGEASLVFSYGYGEDDDKETDTLKFVVGEANLINALSSSLPGMKQGGLRRISVKPERGW-KLEDASCVKSVDI---GSAVGLPGGAVTEAETCLDYFRVP 198
BLAST of NO18G00340 vs. NCBI_GenBank
Match: KOO52793.1 (hypothetical protein Ctob_015359 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 147.1 bits (370), Expect = 8.000e-32 Identity = 87/203 (42.86%), Postives = 118/203 (58.13%), Query Frame = 0 Query: 36 SPTASTLLAKMTAHQDINDAYSRHAILSSSSAALFPFLLLSFLPSPSRALVKGNAPPKDMRKKSGGKPATANMDEAMEMGRKKEQEMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSPSVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDAMEVTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGW 239 SPT + ++ A +D+ ++ A+ + P P++ALVKG+APP M K + ++DE +G K + E + +D +RT GDRYRD V P + +GDT IRYR +RLG ++RDGLSGE T+FS+GYGED+DK GD + V L NLIP + LVGMQ GG+RRVLVRPERGW Sbjct: 16 SPTFAFKATRLAARRDVIACFAAGAVALTG-------------PQPTKALVKGSAPPPKMEPK---ERKCKSIDECEALGEKIKAEAAANER----TDFERTKGGDRYRDLV--PGSGKAVAEGDTIEIRYRVMRLGTKARDGLSGEGQTIFSFGYGEDEDKVGDTLAVQLSGQNLIPGVGDALVGMQPGGRRRVLVRPERGW 196
BLAST of NO18G00340 vs. NCBI_GenBank
Match: CBJ27194.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.9 bits (359), Expect = 1.500e-30 Identity = 92/209 (44.02%), Postives = 113/209 (54.07%), Query Frame = 0 Query: 79 PSPSRALVKGNAPPKDMRKKSG-----GKP-ATANMDEAMEMGRKKEQEMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSPSVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDAMEVTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGWFK-GKGCGVLDDADVSNLAAAFIVPGTKITDTEDCLDLTRIPR 281 P P+ ALVKGNAPP KK G G+P AT D E + + T+ G R++D + P V K + +RYR +LGKRS DG+SGE +VFS GYGEDDDKEGD + V LG LI A++ G+VGM+VGG RRV VRPERGW K C D V + VPG + EDC+DLT PR Sbjct: 87 PPPASALVKGNAPPPGYNKKRGSGYGNGEPEATPTADAGPE-------------DSDPSRTFSVTSSGIRFKDLKIGVGPEV--KPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGSGRLISAVDEGVVGMRVGGVRRVAVRPERGWKKQDPKCATEIDMGVMS-----GVPGAALAKVEDCIDLTLEPR 275
BLAST of NO18G00340 vs. NCBI_GenBank
Match: XP_002182257.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46158.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 111.3 bits (277), Expect = 4.900e-21 Identity = 80/208 (38.46%), Postives = 109/208 (52.40%), Query Frame = 0 Query: 79 PSPSRALVKGNAPPKDMRKKSGGKPATANMDEAMEMGRKKEQEMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSPSVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDD--KEGDAMEV-TLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGWFK-GKGC--GVLDDADVSNLAAAF-IVPGTKITDTEDCLDLTRIP 280 P+PS ALVKG+ PP K + GKP N+DE +EQ++ ++ I T+ G R+RD ++ K GD + Y+ L+LGKRS DG+SGE + VFS GYG +DD K GD V TLG + I A+ + GMQ GG RR + P +GW K K C G +L + IVP + D E C D ++ P Sbjct: 85 PNPSHALVKGSEPP-PRTKMNDGKPKCTNVDECQAQAELREQQL-REEAAANAVPISTTSGGIRFRDLIV--GDGTTAKAGDEVVLHYKVLKLGKRSYDGISGEGTVVFSRGYGLEDDEAKPGDKNFVTTLGSLSNIGAVNDAVPGMQTGGTRRFAILPPQGWRKPSKMCDGGPGGSGSGGDLRTDYVIVPTATMVDAEVCFDQSKQP 288
BLAST of NO18G00340 vs. NCBI_GenBank
Match: XP_009042405.1 (hypothetical protein AURANDRAFT_68467, partial [Aureococcus anophagefferens] >EGB02895.1 hypothetical protein AURANDRAFT_68467, partial [Aureococcus anophagefferens]) HSP 1 Score: 107.8 bits (268), Expect = 5.400e-20 Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = 0 Query: 95 MRKKSGGKPATANMDEAMEMGRKKEQEMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSPSVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDAMEVTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGWFK--------GKGCGVLDDAD--VSNLAAAFIVPGTKITDTEDCLDLTRIPR 281 + + PA A +A+E + + +M + E E + A+ + + + +K+GD +YR +RLGKR+ D LSGEAS VFS GYGEDDD E D + +G LIPAL++ +VGM+ GG+RR+ V PE+GW K G DA ++++A IVP ++ D C++ +P+ Sbjct: 306 LEPRGSAPPAAAAALDAVERAKAAKPDMNEPGEVE--VYVAHLADDEAAAVAMAAGAGGDAVKRGDAVRFKYRVMRLGKRATDNLSGEASPVFSLGYGEDDDSEKDFLSARVGGGQLIPALDSAIVGMRPGGRRRLFVVPEKGWKKINSSCSAESNGASNAGDASAGLADIAGQAIVPLAQMVDNGACIEDALLPQ 499
BLAST of NO18G00340 vs. NCBI_GenBank
Match: OEU09778.1 (hypothetical protein FRACYDRAFT_228597 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 107.8 bits (268), Expect = 5.400e-20 Identity = 81/231 (35.06%), Postives = 111/231 (48.05%), Query Frame = 0 Query: 77 FLPSPSRALVKGNAPPKDMRKKSGGKPATANMDEAMEMGRKKEQEMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSP------------------SVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDAME---VTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGWFK-------GKGCGVLDDADVSNLAAAFIVPGTKITDTEDCLDLTRIP 280 F PS + ALVKG APP K N++E +M ++ QEE GG T G +YRD + SP S+ + GD SI ++ L+LGKRS DGLSGE + VFS GYG +DD++ A + +G ++ IPAL LVGM++ G RR + P++GW + G G G A +VP I E CLD T++P Sbjct: 23 FSPSRADALVKGVAPPPKKSVGGAEKLKCTNVEECQDMAAIRDD--LKAQEEAGGPPPLVTKGGVKYRDISVSSSPDDTNNSDKGEDGNTSNSNSISAQDGDDVSIYFKVLKLGKRSYDGLSGEGTVVFSRGYGLEDDEDKPAQKSFSTCIGSTSNIPALNEALVGMKLNGVRRFAILPQKGWERQTKACDGGPGGG---GAGGDIRTDYVVVPTATIVQQEVCLDNTKLP 248
BLAST of NO18G00340 vs. NCBI_GenBank
Match: OLP76275.1 (hypothetical protein AK812_SmicGene43814 [Symbiodinium microadriaticum]) HSP 1 Score: 106.3 bits (264), Expect = 1.600e-19 Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 0 Query: 107 NMDEAMEMGRKKEQEMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSPSVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDA-MEVTLGKSNLIPALEAGLVGMQVGGKRRVLVRPE--RGWFKGKGCGVLDDADVSNLAAAFIVPGTKITDTEDCLDLTRIPR 281 ++ E E+G K+E+E + + E+ + TA G R++D + K GD +RYR +R GKRS DG+SGEA+T+FS GYGE DD++ DA + LG + A++ GLVGM VGG RRV VRP+ GW K C + + A +P CLD + +P+ Sbjct: 262 SLAECEELGAKREEEKYGTKMEK---TFKVTASGARWKDMKVGNEADGVAKVGDDLKLRYRVMRAGKRSYDGVSGEATTLFSLGYGEGDDEKKDATLNAPLGTGRFVKAIDEGLVGMSVGGIRRVQVRPDYGLGWKKPGKCA----EAIGAVGAIAGLPAAGAEKESACLDTSLLPQ 431
BLAST of NO18G00340 vs. NCBI_GenBank
Match: XP_002296775.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86976.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 100.9 bits (250), Expect = 6.600e-18 Identity = 84/236 (35.59%), Postives = 114/236 (48.31%), Query Frame = 0 Query: 61 ILSSSSAALFPFLLLSFLPSPSRALVKGNAPPKDMRKKSGG----KPATANMDEAMEMGRKKEQ-EMFDKQEEEGGSDIQRTAEGDRYRDTVLPPSPSVP-----LKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYG-EDDDKE-GD-AMEVTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGWFKG-KGC--GVLDDADVSNLAAAF-IVPGTKITDTEDCLDLTRIP 280 +L+SS+A +L+ LP PS ALVKGNAP G N++E EM ++E M + E + G RY D V KGD + Y+ L+LGKRS DGLSGE + VFS GY EDD+K GD + + +G SN+I AL + GM VG RR+ V P+ GW K K C G +L + +VP + + E C D ++P Sbjct: 68 LLTSSTA------ILTTLPQPSLALVKGNAPXXXXXXXXDGATDETKKCRNVEECQEMAERQETLRMQQEAERAANGPKAQVVGGSRYLDIVEEGRDGATEGARVATKGDEVEVFYKVLKLGKRSYDGLSGEGTVVFSRGYALEDDEKNVGDHSFKFKIGDSNVIKALNDAVPGMAVGALRRISVTPQNGWEKNTKQCDGGPGGSGSGGDLKTDYVVVPTATMVEQEACFDRNKLP 297
BLAST of NO18G00340 vs. NCBI_GenBank
Match: XP_005788432.1 (hypothetical protein EMIHUDRAFT_440722 [Emiliania huxleyi CCMP1516] >XP_005790755.1 hypothetical protein EMIHUDRAFT_440166 [Emiliania huxleyi CCMP1516] >EOD36003.1 hypothetical protein EMIHUDRAFT_440722 [Emiliania huxleyi CCMP1516] >EOD38326.1 hypothetical protein EMIHUDRAFT_440166 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 96.7 bits (239), Expect = 1.200e-16 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 0 Query: 169 LRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDAMEVTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGW 239 +RLG ++RDGLSGE T+FS+GYGED+D+EGD + V L NL+ + LVGM+ GG+RRVLVRPERGW Sbjct: 1 MRLGTKARDGLSGEGQTIFSFGYGEDEDREGDTLPVRLAGRNLVAGVNDALVGMKPGGRRRVLVRPERGW 70
BLAST of NO18G00340 vs. NCBI_GenBank
Match: GAX25819.1 (hypothetical protein FisN_17Lh222 [Fistulifera solaris]) HSP 1 Score: 94.4 bits (233), Expect = 6.200e-16 Identity = 74/220 (33.64%), Postives = 110/220 (50.00%), Query Frame = 0 Query: 69 LFPFLLLSFLPSPSRALVKGNAPPKDMRKKSGGKPATANMDEAMEMGRKKEQEMFDKQEEEGGSDI--QRTAEGDRYRDTVLPPSPSVPLKKGDTCSIRYRALRLGKRSRDGLSGEASTVFSYGYGEDDDKEGDAME---VTLGKSNLIPALEAGLVGMQVGGKRRVLVRPERGWFK-GKGC--GVLDDADVSNLAAAFI-VPGTKITDTEDCLDLTRIP 280 LF + + +P+ ALVKGNAPP + KP N++E K+EQ ++E S++ + T+ G +Y D + + GD + Y+ L+LGKRS DG+SGE + VFS GYG +DD+ ++ +G N I AL L+GM+ G RR+ V P+ GW K G+ C G L ++ VP + E C D T+ P Sbjct: 53 LFAATSVMLVANPANALVKGNAPPPKI--SVADKPKCTNVEECQAAAEKREQA---ERELAAASEVSYKITSSGIKYID--IKEGNGDLVADGDEVELFYKVLKLGKRSYDGISGEGTVVFSRGYGLEDDESKPGVKTFVTVVGGYNNIRALNNALIGMRESGVRRISVFPQDGWRKPGRECDGGPGGSGKGGELKTDYVLVPTATMVAAEACFDSTKQP 265 The following BLAST results are available for this feature:
BLAST of NO18G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00340 ID=NO18G00340|Name=NO18G00340|organism=Nannochloropsis oceanica|type=gene|length=3583bpback to top protein sequence of NO18G00340.1 >NO18G00340.1-protein ID=NO18G00340.1-protein|Name=NO18G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=307bpback to top protein sequence of NO18G00340.2 >NO18G00340.2-protein ID=NO18G00340.2-protein|Name=NO18G00340.2|organism=Nannochloropsis oceanica|type=polypeptide|length=281bpback to top Synonyms
Publications
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