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Properties
| Property Name | Value |
|---|
| Description | Armadillo-like helical |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr18 | genome | chr18:132344..139638 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005488 | binding |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR016024 | ARM-type_fold |
Homology
BLAST of NO18G00320 vs. NCBI_GenBank
Match: EWM23231.1 (Armadillo-like helical [Nannochloropsis gaditana]) HSP 1 Score: 434.5 bits (1116), Expect = 1.400e-117 Identity = 325/648 (50.15%), Postives = 379/648 (58.49%), Query Frame = 0
Query: 944 LLGRAARGYGSLLLFPSSRLALLMKGVLQANFAAPDQNLRLHALKVVEELLQWRKEVK-------ARHEGQAASEGREEGGLSMVWVAFLMRHVRRAFLDPYHGVRAVACACLSHFEAQDWREG-----GKEE------------------GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTEGCLARMIVAAREDTISGIKANACRVLGVLLPHWTATLALPPS----LPPSLASSALLVASRDARLGVRAQAIWAISNFSHSLSKEGGREGGRVDVAAICAAALEVLRAQPEQEKTTSSALRAIGHLLGQL------NXXXXXXXXXXXXXXXXXXXXXXXXIASLRRACLSAILDIVQ--------GQGREGEEEGAGEKGKDTPVRVKARWNACCALTSFLHATAWRRTTKTERKEGLGVGEVDDEDEGXXXXXXXXXELGPIIAVLLHASLTDRNVKVRAHAAAGLRAVGPFPSSYDSYSGGGFPAVLDAALEAYMQSSVVSSHPPSLSASRTLDRLLQHLVGVALVRE----REREEGIDGETARRVMTWLRQAFSKSGGXXXXXXXXXXXXXXXLAQRLWEEGMVRVWDVDVLEGLRALARSTRVPIDRGRAVEKESTGEELEVQGGEEEEE 1540
LLGR ARGYG LLL P SRL + VL NF DQN+RLHALKVVEELLQWRK K R EG R E G WV FLMRHVR AF DPYHGVRAVACACLSHFEA+DWREG G+E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S EG L ++VAA+ED +SGIKANACRVLGVLLPHW +TL LP S ALLVA++D RLGVRAQAIWA+SNFS SLS+EG +G RVDV AICAAALEVL+ QP QEKT +SALRA+GHLLG+L N LRR CL +L+ ++ E+ GE ++ RVK +WNACCALTSFL A A + + E++EG + E GP++ LLHA LTD+N KVRAHAA GLRAVG F SSY +S GGF A+LDA L+A ++ PP S +LDRLL+HLV VA+VRE R EE ++ +TARRV+ WLR + G LAQ WEEG R WDVD+L+GLR R + + R K + G + EE+EE
Sbjct: 26 LLGRVARGYGCLLLSPPSRLHWFQERVLLGNFGGGDQNIRLHALKVVEELLQWRKHKKTEDIAGQGRREGTGGKGKRREEGSLEGWVFFLMRHVRHAFYDPYHGVRAVACACLSHFEAKDWREGWGGGLGRERLISSPLVPVEHALSPANGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALSLEGFLGHLVVAAQEDPVSGIKANACRVLGVLLPHW-STLFLPSSXXXXXXXXXXXQALLVATQDVRLGVRAQAIWALSNFSQSLSREGAGDGVRVDVGAICAAALEVLKQQPGQEKTANSALRALGHLLGRLGFEEGGNHEKDPRDDGQGGYSGGNGRRRTEEEIRLRRDCLEVMLESLRDPQXXXXXXXXXXXXEKDKGE--REAGSRVKLKWNACCALTSFLEARALQSADQVEKEEGEKRAVEGGREGWLEDRKRDHDERGPVVVALLHALLTDKNAKVRAHAALGLRAVGNFRSSYSYHSEGGFSAILDAVLDARAHFAL---SPP--QTSHSLDRLLRHLVWVAVVREGDGGRRAEEELNADTARRVLAWLRS--YAAHGEGAKNQERPGQACRELAQAWWEEGKARRWDVDILDGLRWFIREESMGGRQTRVGAKMTEGGREGHRMAEEDEE 663
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00320 ID=NO18G00320|Name=NO18G00320|organism=Nannochloropsis oceanica|type=gene|length=7295bp
AGGACAGACGGAGGGACGAATAGAGGCCAGTCACCGTCGGGAGATTGTCA
TTTTCAGCCTCGTGGTGCCAAAATGCTGCCACCACTATATTGCTATAGCA
GCACAATAGCGCAAAATGACAGCTGTTAGGCTGTCCGTCCACTGCTTTCC
TAGACCACGGCAGGACCAATGATTGAGCCATGTCGGGAGCGTCGGGATGG
TGGTAAAAGTGCTGGAAAACCGAGAGGGTCCTGGCAACGAGGACGCTCTC
CGCCTCGGACCTCCCTATCGTCCTCTTATTCGTCCTTCGGAAAAGAAGAT
GGGAAACGAAGCAATGGAGACGAAGAAGAGAGAAGGGGGAGGAGAGGAAG
GAATGGAGAAAAGCAAGGAAATGTATTTAAGCAGCAGCACCACCAGCATC
CGCCAGCATTCAAGACAGGGATGGAAAGAACCAGCTGGGGGGGAGGAAGG
GGGAGAGGAAGGGTAAGGGGGAGCCCATGGGACCTGCCGACGCAACGCCG
AGAGCGACAATTATGGAGCGAAGCAATGCAGGAGCTTCAAAGACTTGTTG
ACAAGAGGAAGGAAAGGGAGGAAGAGGTCGAGGAAGAAGGAGGGAGGAAA
GACGAGGGCGGGTGGGAGGAGGAGGAGGATCGGGCGCGGCTGGCGATAGA
CCAAGTATTGAGCCAGCTCTCGACGgtacgttcacatgataacacccctc
cttccctccccccctcttcatccttccctccctccttccttcccatccat
tctgatcccgtgcctactccattcgaccactcaaggatcaaatggctcat
tcctccctcgatatttttccccctctctcctttggtatatctccccatct
cctttccttctatccctccagTTTTCCTTACCCCTCTCTTCCGTGGCGGG
GGACGAAATGGCTTCCCTGTTCACCCTCCTCTGCCGTGCCTGGATCGGGC
CAGCGGGCGGCGGGAAGGAAGGAGGGAGGGAAGACAGGCAAGGCGAGAGG
AGGAGGAGGAGGCGTCGGGTTGTGTTGAGACTAGGTCTGAGGGTATCTCG
TTTCTTTCTTGCCGTGGCCGTGGCGAGCGCGAGCGCGACGATTAAGAAGg
ttagattccctccctccctccctccctcccttccttcctctctttctcct
cctcttgttccttcaggatctcaccaccttgttcctctcctccctcccga
cactccctcccttcctctctcccttttcccccttttattccaacagGACA
TGTCTACCCCCTCCCTTGCATCTCTGCAGCTGGTGCCCATCGTGGAGTTT
TGGGCGTGGCTTCTCCGGCATTACACCCAGGGCGACCAGGACGAGGACGA
GGACGAGGAGGCAGGGGCCGAGGAAGGGATGGAAGAGGCGTTGCAGGCGC
TGGCGCAAgtgagtgttggattgaagcagggaggcagacagggagggagg
gagggagggaggaagggtaggcgggagaggaaaagacgagaaattgcaag
aaactcattcaattgaaggacgctccctccctcccttcctccctccctct
ctctctcccccccttccctccctcttcacccccaccaaccagCTTCTCCA
CGACCACGGGAACAAGATGGATGCCCTCTATGCCTCCCTCCTTCCCTCCC
TCCTCTCCCTGGCCGATCCCTCCTCCTCCCTGTCTCGCCGTCGTCGGGTC
CGAGCTACGGCCGCGGAGACCGCCCAGGGAGGGAGGGAAGGCGAGCTCGC
TCGTTTCCTTCTTCATCAGCGGCAGGAGAGGGAGCGGGTGGCGGCGCTTG
AATGCGTCGGTCTCCTCTGCAAGCATCAGTTGCCCTCCCTCCGTCCTCAA
GCCTCCTCAATCCTCCTCCCTCTCTTCCTCGCCTCCCTCTCCCTCTCCCT
CTCCGCCCCCAGCACCTCCACCGCTGCCTCCCTCCCTTCCTCCCTCCCGA
CCTCCCTGAGGGCCCTCCTGCATCTCCTCTTAGACGGGCCCGACGGGATG
GGCCGAGGGCTGGATGGGGGCAACGTCGGGGTGCTCGTGCGGGTCATCAA
TCGGGTGCTTCAACCTTCGgtaaggaacgcccctccttcccgccctccct
ccctcccttccttcctccttgcccttctccctcctctccctccctctaaa
gcgtccgttgtttggttccttccattaaaatggagaggggctgctagcac
tctcacccttgctcccctccctccctccctccctccctccctctccccct
ccctgcctctccatcttcccagGGCGTGCGACCACAGGAAGGAGCCACAA
GAGGCCCGCCCACCCCTGTCTGGAGAGGCCTTGATGACAGCGCAGACGAC
TTTACGGGAGGGACCGAGGGAGGGCACACGTCCCACCCTCCCTCCTCCTT
CGCCTCCCCCCCTCCCCGTGCCACGGCCGCAGCCTCTCCCTCCCTCCATC
CGTCCCCCTCCTCCGCCTCCACCCGCTCCCTCTCCCGGCGCCGAATCAGC
CATGACCCGAATGCCTCCCTCCCTTTCTCCCTCCCTCCCTCCCTCCGCCT
CCTCTCCCTCCAGCTCCTGAGCCTCCTCGCCTCCTCCTACCCCAAAGCCC
TCCTCCCTCACTGGCCTCTTCTCCTTCCCGACACCCCCTCCCTCCCTCCC
TTCCGCCCCTCCTTCCCTCCTGCATTCCCTCCCCCCCTCCTTCCCTCCCT
CGGCCCTCCCCCCCTTCTCCTCTTCCTGGAGTGGTGCGATCGGAGGAGAG
AGGGAAAGGCAGCTGCAGCTGGGACGGCCGCACTAGgtcagagagtggag
ggggagagggaggaagggagcgaggggaagaatgtaagggtaccagtgaa
ggaaagggctgcaattgatcatcctcacctttcctccctcccttcctccc
tctctccctccctcagCCCACATGCTCAAGTCGGCTCCTCTCAAACAATG
GAGTGAGGCCCTGGCCCGCCAAAAACCCACAAGAAGCAGCAGCAGCAGCC
GCAACAACAGCAACAGCAACAGCAGCACCAGCACCACCAGCAGCACCACC
ACCACCACCACCACCAACAGCAACAGCAGCATCCATCCTCCCTCCCGCCC
TCCCTCCCTCCCTCCCTCTCGCCCCCCTGCCCGCCTCTCCCTCACGGACA
AATGGCAAGCCACGCTTGCTCACATCCATGCCGCCCTTCCCATCCTGGTG
CTGGGAAGGAGGGAGGGAGGGAGGGTGGGAGGGGTGGTTGCATCGTCAGG
GTTTTATCAGgtgggccgaaaggagggagggatggataagagggaggcta
atgtgataccagctgaaacagcccaatcctctggctgactccttccctcc
ctccttccctccctccttccttcccttcctccttcccttcctccttccct
tcctccttccctccctccttccctccctccttccttcccttccctccttc
ccttcctcttcctctcacgcacagGAGTTGTTGAAAGTCATCTCCACCCT
CCTTTCTTCCTTCCCTCCTTCCCTCCCGTCCTCCCCTTCGTCCCTCCCTT
TCTCCCTCCCTTGCTGGGAAGTAGCCAAACGGGACATGAGGAAAGGAGTC
AGAGAGGCCCTCTTCCTCCTTCACCGCCTCTTGAGCGAGGACGAGGACGA
GAGAGGAAAGGAGGAAGGGAGGGAGGGAGGGAGGGAAGGAGGAAGAGGGG
GGGAGGAGGGAGGAAGAGAGGGAAGAAAGAGGATGGATGCCAGGACGCGG
CACGAGATAATGCATGCCATTGCGGCGATGTTTCAGGCGGCTGCCTCCTC
CCTCCCTCCCTCCCTCCACCCTTCCCTCCTTTCCGCACACGACGACCCGA
TCCGTGCTTTGCTCCTGCATCGCGCTGACGGCAAGAGGGGAGGGAGGGAG
GGAGGGGCCGCCTTCATTGATCAGCTCCTGGAGGCAGCAGCCGCACCAGC
ACCAGCACCAGCAGCAACAACAACAGTAATAACAACCACAACAGCAGCAG
CAGCAGCAACAACAACAACAGGTGCGATGGCTGCGTCTCCTCCGCGTTTT
GAAAGACAAGACGCTCTTCTCCTCCTCGGAAGGGCCGCCAGgtccgtctt
ccctccctccctccctccctccctctctcccctcctccctttcccccttc
tcaggggccacggttcccccctcctcgcttttcctatttcccaccatccc
ttcttcctctcttccctcgcacctggccctctcccgcacgggaatgatcc
tcataaaaccaaatattgcatcgttcccttccctctctcatctcctcacc
catcccttccctttctcccctccctgcctccctctttccctcctccagAG
GCTATGGTTCCCTCCTCCTCTTCCCCTCCTCCCGCCTTGCTCTTCTCATG
AAGGGCGTTCTACAGGCCAACTTCGCCGCCCCTGATCAGAACCTGCGCCT
GCATGCCTTGAAGgtcaggagggacggagggacggagggacggaaggggg
agggaagggatgggctgcccccaggctctgtgagatccacacggcttgac
cagaatctagatgatattaggaatcaaagtgtcaggggaggagagagggg
tgaagggaaggagggaggaaggagagcaggcagggaagtgttgggctgct
cggcctgtccttcttgttaatccattaacgccgcggtttctccttccctc
cccttccctccctcgttgctgacacagGTGGTAGAAGAACTGCTGCAGTG
GCGGAAAGAGGTCAAAGCCCGGCACGAGGGACAGGCGGCGAGCGAGGGAA
GGGAGGAGGGCGGGTTGTCGATGGTGTGGGTGGCCTTCCTCATGCGgtac
gtctgccaaatgttctctccctccctctttcatcctctctccctccttcc
tccctctttcatcctctctccttccctccctccctctcccttattctcct
cctctcatttccattctccctgtcagcacgtctttctcaccactaccatc
ccctcctccctccctccctcccgccctccctccctccctccctccctccc
tccctcccctagGCACGTCCGACGTGCTTTCCTTGACCCCTATCACGGGG
TTCGGGCCGTGGCTTGCGCGTGTTTAAGCCACTTCGAGGCTCAGGACTGG
AGGGAGGGAGGGAAGGAGGAAGGGGAGgtagggcgggagggagaacaaga
gggagtgggggcagaagcatagcggtagcgtcgttcggtctcgacttttt
ttcatttcttcgtttatttattcatttatttgttgtttaatttatctatc
tatccattttacttattcattcatttcatcctccatgcatgtcgccttga
tccacagCAGGACGTAGGTGGAAAGGAACAAGAGGGAGAAGAGGTGGTAG
GGGGGGAGGAGGAGGGGGAGGAGAAGAGGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGCAATCAGCACGGAAGGCTGCTTGGCCCGTATGATCGTCGC
AGCGCGGGAGGACACCATCTCCGGGATTAAGgtatctcctccctccctcc
ctccctcctccctcccctccctcccttcttcccttcctctctccctcctt
gcccccctctcttctctctcctccgaccacaaacctctttcttacccctt
ccctcgctccctcccccgctccctccctccccctcccctccctcccttct
cagGCCAACGCCTGCCGCGTTCTCGGGGTTCTTCTCCCCCACTGGACCGC
TACGCTTGCCCTCCCTCCCTCCCTCCCTCCTTCCCTCGCCTCCTCAGCCC
TCCTGGTGGCAAGTCGGGATGCTCGCCTGGGGGTCAGAGCTCAAGCCATA
TGGGCCATCTCCAACTTCTCGCATTCCCTTAGCAAGGAGGGAGGGAGGGA
GGGAGGGAGGGTGGACGTGGCTGCGATATGTGCAGCGGCATTGGAGGTGT
TGCGGGCACAGCCGGAGCAGGAGAAGACGACTAGTAGTGCCCTGAGGGCT
ATAGGgtagggtggaagggagaagggagggggaggggagggagggagggg
agaggaggggagggacgggagggagtgtaagtggcgccttgagggctggg
agctaggcagggaggaagggcagggaggaacttctcacatagtatcattc
gctcatttccttccttcctctccctccctccctgcctttgtagTCACCTT
CTCGGCCAGCTTAACGAGGAGGAGCAGCAGCAGCGAGGAGGAGTAGCATT
AGCAGCAGCAGTAGCAGCAGCAGAAGGGGGAAGCGAAATAGCATCCTTGC
GTCGCGCGTGTCTCTCCGCTATCTTGGACATAGTGCAGGGTCAAGGGAGA
GAGGGCGAGGAAGAGGGAGCGGGAGAGAAAGGAAAGGATACACCGGTGCG
CGTGAAGGCGAGATGGAATGCTTGTTGTGCATTGACTTCATTTTTGCATG
CCACGGCATGGAGGAGGACGACGAAGACGGAAAGGAAGGAGGGGCTGGGG
GTGGGAGAAGTGGATGACGAGGATGAAGGGAGGGAGGAAGGGGAGGAGGG
AGGGGGGGAGTTGGGGCCAATCATTGCGGTCTTGCTTCATGCCTCACTGA
CGGACAGAAATGTCAAGgtacagaagggagagagggtgggagagagtgag
ggaagaggacggaaatgaggaaagagagacagtgttgaaccacatggact
cgcctgtgcctttgtcatctaaacgtacccacccttcttcccttcttccc
ttccttttcctcttgctcagGTGCGCGCCCACGCCGCCGCTGGCCTCCGT
GCTGTGGGTCCTTTTCCCTCCTCCTACGATTCCTATTCTGGCGGCGGCTT
CCCAGCCGTCTTGGACGCCGCCCTCGAGGCTTACATGCAGTCCTCCGTTG
TTTCCTCCCATCCCCCTTCCCTCTCTGCCTCGCGTACCCTTGACCGCCTT
CTACAGCATTTGGTGGGGGTGGCATTGGTGAGGGAGAGGGAAAGAGAAGA
AGGGATAGATGGAGAAACGGCTCGAAGGGTCATGACGTGGCTCCGACAGG
CTTTCAGTAAGAGTGGAGGGAGAGAAGTAGGGAGGGAGGGAGGGAGGAAA
GGAGGGTATCAGGAATTGGCGCAAAGGTTGTGGGAAGAGGGGATGGTAAG
AGTGTGGGATGTAGACGTACTGGAAGGCTTGCGTGCCTTGGCACGCAGCA
CCCGCGTGCCGATAGACAGGGGGAGGGCGGTGGAGAAGGAGAGCACGGGG
GAAGAGCTGGAGGTCCAGGGGGGGGAAGAAGAGGAAGAGCTTTAA back to topprotein sequence of NO18G00320.1 >NO18G00320.1-protein ID=NO18G00320.1-protein|Name=NO18G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1541bp
MIEPCRERRDGGKSAGKPRGSWQRGRSPPRTSLSSSYSSFGKEDGKRSNG
DEEERRGRRGRNGEKQGNVFKQQHHQHPPAFKTGMERTSWGGGRGRGRVR
GSPWDLPTQRRERQLWSEAMQELQRLVDKRKEREEEVEEEGGRKDEGGWE
EEEDRARLAIDQVLSQLSTFSLPLSSVAGDEMASLFTLLCRAWIGPAGGG
KEGGREDRQGERRRRRRRVVLRLGLRVSRFFLAVAVASASATIKKDMSTP
SLASLQLVPIVEFWAWLLRHYTQGDQDEDEDEEAGAEEGMEEALQALAQL
LHDHGNKMDALYASLLPSLLSLADPSSSLSRRRRVRATAAETAQGGREGE
LARFLLHQRQERERVAALECVGLLCKHQLPSLRPQASSILLPLFLASLSL
SLSAPSTSTAASLPSSLPTSLRALLHLLLDGPDGMGRGLDGGNVGVLVRV
INRVLQPSGVRPQEGATRGPPTPVWRGLDDSADDFTGGTEGGHTSHPPSS
FASPPPRATAAASPSLHPSPSSASTRSLSRRRISHDPNASLPFSLPPSLR
LLSLQLLSLLASSYPKALLPHWPLLLPDTPSLPPFRPSFPPAFPPPLLPS
LGPPPLLLFLEWCDRRREGKAAAAGTAALAHMLKSAPLKQWSEALARQKP
TRSSSSSRNNSNSNSSTSTTSSTTTTTTTNSNSSIHPPSRPPSLPPSRPP
ARLSLTDKWQATLAHIHAALPILVLGRREGGRVGGVVASSGFYQELLKVI
STLLSSFPPSLPSSPSSLPFSLPCWEVAKRDMRKGVREALFLLHRLLSED
EDERGKEEGREGGREGGRGGEEGGREGRKRMDARTRHEIMHAIAAMFQAA
ASSLPPSLHPSLLSAHDDPIRALLLHRADGKRGGREGGAAFIDQLLEAAA
APAPAPAATTTVITTTTAAAAATTTTGAMAASPPRFERQDALLLLGRAAR
GYGSLLLFPSSRLALLMKGVLQANFAAPDQNLRLHALKVVEELLQWRKEV
KARHEGQAASEGREEGGLSMVWVAFLMRHVRRAFLDPYHGVRAVACACLS
HFEAQDWREGGKEEGEQDVGGKEQEGEEVVGGEEEGEEKREEEEEEEEEE
AISTEGCLARMIVAAREDTISGIKANACRVLGVLLPHWTATLALPPSLPP
SLASSALLVASRDARLGVRAQAIWAISNFSHSLSKEGGREGGRVDVAAIC
AAALEVLRAQPEQEKTTSSALRAIGHLLGQLNEEEQQQRGGVALAAAVAA
AEGGSEIASLRRACLSAILDIVQGQGREGEEEGAGEKGKDTPVRVKARWN
ACCALTSFLHATAWRRTTKTERKEGLGVGEVDDEDEGREEGEEGGGELGP
IIAVLLHASLTDRNVKVRAHAAAGLRAVGPFPSSYDSYSGGGFPAVLDAA
LEAYMQSSVVSSHPPSLSASRTLDRLLQHLVGVALVREREREEGIDGETA
RRVMTWLRQAFSKSGGREVGREGGRKGGYQELAQRLWEEGMVRVWDVDVL
EGLRALARSTRVPIDRGRAVEKESTGEELEVQGGEEEEEL* back to top
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