NO18G00190, NO18G00190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G00190 vs. NCBI_GenBank
Match: EWM20221.1 (hypothetical protein Naga_100716g2 [Nannochloropsis gaditana]) HSP 1 Score: 441.8 bits (1135), Expect = 2.900e-120 Identity = 214/443 (48.31%), Postives = 285/443 (64.33%), Query Frame = 0 Query: 65 DGFRTLLDEYRTLWTAGWNARYTKYYIPVPPKVTWRLEAEDIVEREYRRLHFPARCSDVNGWLVVNAYNWGIMSAIRDYQSDILRALAMNYTLVHQGAYDLCPSNPQQFLDCFWEDLNGCQSEFPTLSSISRINQPQEITTSAVFHEQFPHWLWNLLVDKGTIHLQHGLTGATLT--EEDIVDEDQYLQLKLSVLRAILSKRVFKPRRHIQQKTLTILESWISNGSYASTSESGVVIHIRRTDKMSDLGAHWRYIDFKSTAHFGCLIQRMENMINHTFQHFFVMSDDPIMQKRGAEELASSFQANPSN--LASTELCNLLGANRSEYKGHQSLAAAHRHQLYDIVVAEMYAAIEVSEYIIGSGSCAVSQFMALNIGARHRVEPGLVALWEEDLIIKECRLLLHQRINLHKPCNISSYMGRSNDKPSCQTFLDIQWSDKTCLQF 504 +G ++D RTLWTAGWNARYT+YY P +TW AEDI EREYRRLHFP+ C +V GW+V Y WG++S RDYQSDILRA+ N TLVH G Y CP+NP+++L+CFWED N CQ+ + T ++ + Q + + + ++FPHWLW L+ D +H+ TG L+ E+ +D D +LQ KLSV+RAI++K VFKPR I + + +E+W N +Y +S G+++HIRRTDK+ DLG HWR+IDF ST H G IQ ME+ IN +F ++ V+SDDP MQ++ EL FQ L ST LC+ LG+N Y GH+SL RH LY ++++++YAAI+VS+YIIGSGSC VSQF+A NIGA+H EP A WEEDLI+KEC LL Q R + P + L +W KTC F Sbjct: 39 NGVMMIVDPERTLWTAGWNARYTRYYKDSKPIITWTKHAEDIFEREYRRLHFPSSCLEVRGWMVTKPYWWGLVSVARDYQSDILRAMTRNLTLVHDGPYMFCPNNPERYLNCFWEDFNSCQNFWKTQPNVPIVEQTWQGSIKPLSSDEFPHWLWRLMRD--YMHIYDDSTGRILSIEEDAFLDTDMFLQTKLSVMRAIMTKTVFKPREFIIESSKKSIETWGENENYHGSSRLGLLVHIRRTDKLEDLGPHWRHIDFNSTRHMGPYIQAMESAINSSFDNYVVLSDDPHMQEKATFELTPYFQNGNGTQALYSTSLCHFLGSNDFNYTGHESLDYNARHDLYVLLLSDIYAAIQVSDYIIGSGSCGVSQFIAWNIGAKHYFEPSPAAFWEEDLIVKECHWLLDQH--------------RQSKNPITKAMLHREWGRKTCAAF 465
BLAST of NO18G00190 vs. NCBI_GenBank
Match: EWM20238.1 (hypothetical protein Naga_100470g2 [Nannochloropsis gaditana]) HSP 1 Score: 438.0 bits (1125), Expect = 4.200e-119 Identity = 211/458 (46.07%), Postives = 288/458 (62.88%), Query Frame = 0 Query: 52 AQRNENSELESHA----DGFRTLLDEYRTLWTAGWNARYTKYYIPVPPKVTWRLEAEDIVEREYRRLHFPARCSDVNGWLVVNAYNWGIMSAIRDYQSDILRALAMNYTLVHQGAYDLCPSNPQQFLDCFWEDLNGCQSEFPTLSSISRINQPQEITTSAVFHEQFPHWLWNLLVDKGTIHLQHGLTGATLTEEDIVDEDQYLQLKLSVLRAILSKRVFKPRRHIQQKTLTILESWISNGSYASTSESGVVIHIRRTDKMSDLGAHWRYIDFKSTAHFGCLIQRMENMINHTFQHFFVMSDDPIMQKRGAEELASSFQANPSN--LASTELCNLLGANRSEYKGHQSLAAAHRHQLYDIVVAEMYAAIEVSEYIIGSGSCAVSQFMALNIGARHRVEPGLVALWEEDLIIKECRLLLHQRINLHKPCNISSYMGRSNDKPSCQTFLDIQWSDKTCLQF 504 ++ N N + H +G ++D RTLWTAGWNARYT+Y+ P +TW AEDI EREYRRLHFP+ C +V GW+V Y WG++S RDYQSDILRA+ N TLVH G Y CP+NP+++L+CFWED N CQ+ + T ++ + Q + + + ++FPHWLW L+ D I+ ++ E+ +D D +LQ KLSV+RAI++K VFKPR I Q + +E+W N +Y +S G++IH+RRTDK+ DLG HWR+IDF ST H G IQ ME+ IN +F ++ V+SDDP MQ++ EL FQ L S+ LC+ LG+N Y GH+SL RH LY ++++++YAAI+VS+YIIGSGSC VSQF+A N+GA+H+ EP L A WEEDLI+KEC L Q R + P + L +W K C F Sbjct: 72 SRHNVNQDNVPHGRKDQNGVMMIVDPERTLWTAGWNARYTRYFKDSKPVITWTKHAEDIFEREYRRLHFPSSCLEVRGWMVTKPYWWGLVSVARDYQSDILRAMTKNLTLVHDGPYMFCPNNPERYLNCFWEDFNSCQNVWKTQPNVPIVEQTWQDSIKPLSSDEFPHWLWRLMRDYMHIYDDSTERILSIEEDAFLDTDMFLQTKLSVMRAIMTKTVFKPREFIIQSSKKSIETWGGNKNYDESSRLGLLIHVRRTDKLEDLGPHWRHIDFNSTRHMGPYIQAMESAINASFDNYVVLSDDPHMQEKATFELTPYFQNGNGTQALYSSSLCHFLGSNNFNYTGHESLDYNARHDLYVLLLSDIYAAIQVSDYIIGSGSCGVSQFIAWNLGAKHQFEPSLAAFWEEDLIVKECHWLFDQH--------------RQSKNPITKAMLHREWGRKKCAAF 515
BLAST of NO18G00190 vs. NCBI_GenBank
Match: EWM20242.1 (hypothetical protein Naga_100380g3 [Nannochloropsis gaditana]) HSP 1 Score: 436.8 bits (1122), Expect = 9.300e-119 Identity = 207/428 (48.36%), Postives = 278/428 (64.95%), Query Frame = 0 Query: 65 DGFRTLLDEYRTLWTAGWNARYTKYYIPVPPKVTWRLEAEDIVEREYRRLHFPARCSDVNGWLVVNAYNWGIMSAIRDYQSDILRALAMNYTLVHQGAYDLCPSNPQQFLDCFWEDLNGCQSEFPTLSSISRINQPQEITTSAVFHEQFPHWLWNLLVDKGTIHLQHGLTGATLTEEDIVDEDQYLQLKLSVLRAILSKRVFKPRRHIQQKTLTILESWISNGSYASTSESGVVIHIRRTDKMSDLGAHWRYIDFKSTAHFGCLIQRMENMINHTFQHFFVMSDDPIMQKRGAEELASSFQANPSN--LASTELCNLLGANRSEYKGHQSLAAAHRHQLYDIVVAEMYAAIEVSEYIIGSGSCAVSQFMALNIGARHRVEPGLVALWEEDLIIKECRLLLHQRINLHKPCN---ISSYMGRSNDKPSC 488 +G ++D RTLWTAGWNARYT+YY P +TW AEDI EREYRRLHFP+ C +V GW+V Y WG++S RDYQSDILRA+ N TLVH G Y CP+NP+++L+CFWED N CQ+ + T ++ + Q + + + ++FPHWLW L+ D I+ ++ E+ +D D +LQ KLSV+RAI++K VFKPR I Q + +E+W N +Y +S G++IH+RRTDK+ DLG HWR+IDF ST H G IQ ME+ IN +F ++ V+SDDP MQ++ EL FQ L S+ LC+ LG+N Y GH+SL RH LY ++++++YAAI+VS+YIIGSGSC VSQF+A N+GA+H+ EP L A WEEDLI+KEC L Q P + GR P C Sbjct: 89 NGVMMIVDPERTLWTAGWNARYTRYYKDSKPMITWTKHAEDIFEREYRRLHFPSSCLEVRGWMVTKPYWWGLVSVARDYQSDILRAMTKNLTLVHDGPYMFCPNNPERYLNCFWEDFNSCQNFWKTQPNVPIVEQTWQDSIKPLSSDEFPHWLWRLMRDYMYIYDDSTERILSIEEDAFLDTDMFLQTKLSVMRAIMTKTVFKPREFIIQSSKKSIETWGGNKNYDGSSRLGLLIHVRRTDKLEDLGPHWRHIDFNSTRHMGPYIQAMESAINASFDNYVVLSDDPHMQEKATFELTPYFQNGNGTQALYSSSLCHFLGSNNFNYTGHESLDYNARHDLYVLLLSDIYAAIQVSDYIIGSGSCGVSQFIAWNLGAKHQFEPSLAAFWEEDLIVKECHWLFDQHRQSKNPITKAMLHREWGRKKSTPRC 516
BLAST of NO18G00190 vs. NCBI_GenBank
Match: GAQ79250.1 (hypothetical protein KFL_000270090 [Klebsormidium nitens]) HSP 1 Score: 73.2 bits (178), Expect = 2.700e-9 Identity = 84/392 (21.43%), Postives = 150/392 (38.27%), Query Frame = 0 Query: 97 VTWRLEAEDIVEREYRRLHFPARCSDVNGWLVVNAYNWGIMSAIRDYQSDILRALAMNYTLV-----------------------------------HQGAYDLCPSNPQQFLDCFWEDLNGCQSEFPTLSSI---SRINQPQEITTSAVFHEQFPHW---LWNLLVDKGTIHLQHGLTGATLTEEDIVDEDQYLQLKLSVLRAILSKRV----FKPRRHIQQKTLTILESWISNGSYASTSESGVVIHIRRTDKMSDLGAHWR-YIDFKSTAHFGCLIQRMENMINHTFQHFFVMSDDPIMQKRGAEELASSFQANPSNLASTELCNLLGANRSEYK-GHQSLAAAHRHQLYDIVVAEMYAAIEVSEYIIGSGSCAVSQFMALNIGARHRV 442 +TW EAED + FPA C WLV++ + G+ S+ Y +L +L++N TLV + AY + PQ +D W + + + L I + +P+ + Q W LW LVD G++ +V + + ++ + + +L V ++P + +Q+ + TIL + V +HIRRTDK + +WR + +++ +G + + FV SD + K N + A + + L + E H+ L ++Q+ + +VA M A+E SEYI+ + +V + MA + R R+ Sbjct: 132 LTWSAEAEDFLLNVVLERQFPADCG-AEKWLVIDPHRHGLGSSTHTYVLTLLMSLSLNRTLVINEEPPDPRQDGCVPASITTLFEPHTHCSFATNPEKRAAYQM----PQAAMD--WRQILNPEEDLEELDVIRLTDTVPRPRGWSWERXXXXQAEGWWERLWEQLVDSGSV--------------SVVGDGPFSEVSMQTQQMMLWANVLNWMWRPTKRVQRISRTIL-------CNHEAQKPLVSVHIRRTDKEVE-DPYWREHHEYRPLTDYGAAVAEYAEATGSDVRTVFVFSDSAKLMKELPNTGLGMLGLNDKS-AELIVDDFLDLSPIEANWSHERLGCEQKNQIVEHLVAAMEVALENSEYIVMTMGSSVGRIMAEVMAGRRRI 493
BLAST of NO18G00190 vs. NCBI_GenBank
Match: GAQ86544.1 (hypothetical protein KFL_002950160 [Klebsormidium nitens]) HSP 1 Score: 72.0 bits (175), Expect = 6.000e-9 Identity = 84/386 (21.76%), Postives = 150/386 (38.86%), Query Frame = 0 Query: 94 PPKVTWRLEAEDIVEREYRRLHFPARCSDVNGWLVVNAYNWGIMSAIRDYQSDILRALAMNYTLVHQGAYDLCPSNPQQ----------FLDCFWEDLN--------------------GCQSEFPTLSSISRINQPQEITTSAV------FHEQFPHWLWNLLVDKGTIHLQHGLTGATLTEEDIVDEDQYLQLKLSVLRAILSKRVFKPRRHIQQKTLTILESWISNGSYASTSESGVVIHIRRTDKMSDLGAHWRYIDFKSTAHFGCLIQRMENMINHTFQHFFVMSDD-PIMQKRGAEELASSFQANPSNLASTELCNLLGANRSEYKGHQSLAAAHRHQLYDIVVAEMYAAIEVSEYIIGSGSCAVSQFMALNIGARHRVE 443 P + W A ++V + FP C+D WLVV G+M + ++ L T++ A P N + L CF+E N Q F S+ +++ + + A + FP LW+LL +G +H++ + D+ E + + +L ++ S +F P ++ T ++ Y V +HIRR DKM++ + ++ + +G I+ E F FV SD ++ A+ + Q + S + E L E H + + L D +VA +YA +EVSEY++ + S + +F+ +GA+ R+E Sbjct: 224 PTALRWTSAASELVHGLLQAQQFPDSCADAK-WLVVEMDLAGLMWNYHAFLRALIIGLQTGRTVI-PVARSPVPGNEWESAAFAGCENLHLGCFFEITNCTAGSSHRKAELLRASEFVPSYQWPFKNASAREALSREEVLRARAFKGWEYDWRYTFPAGLWDLLASRGMVHME---------DRDVSVERASSEQRQFMLFSLASSWLFNPVPRVKDLTDKMM------SKYERWRPPVVGLHIRRGDKMAEDPYWVAHKAYRPASDYGKRIRARERARGFDFAAVFVASDSATVIDTIAADPGSVGLQPDVSVMYDWEKSVALLEAVDE---HSHVPGDKKRDLQDKLVATLYAMVEVSEYVVCNLSSNICRFLWTAMGAKKRLE 589 The following BLAST results are available for this feature:
BLAST of NO18G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00190 ID=NO18G00190|Name=NO18G00190|organism=Nannochloropsis oceanica|type=gene|length=2155bpback to top protein sequence of NO18G00190.4 >NO18G00190.4-protein ID=NO18G00190.4-protein|Name=NO18G00190.4|organism=Nannochloropsis oceanica|type=polypeptide|length=410bpback to top protein sequence of NO18G00190.3 >NO18G00190.3-protein ID=NO18G00190.3-protein|Name=NO18G00190.3|organism=Nannochloropsis oceanica|type=polypeptide|length=539bpback to top protein sequence of NO18G00190.2 >NO18G00190.2-protein ID=NO18G00190.2-protein|Name=NO18G00190.2|organism=Nannochloropsis oceanica|type=polypeptide|length=380bpback to top protein sequence of NO18G00190.1 >NO18G00190.1-protein ID=NO18G00190.1-protein|Name=NO18G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=516bpback to top Synonyms
Publications
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