NO18G00150, NO18G00150 (gene) Nannochloropsis oceanica

Overview
NameNO18G00150
Unique NameNO18G00150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7074
Alignment locationchr18:56995..64068 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:56995..64068 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|658593gene_9783Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00150.3NO18G00150.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00150.2NO18G00150.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00150.1NO18G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00150.3NO18G00150.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00150.2NO18G00150.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00150.1NO18G00150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00150 ID=NO18G00150|Name=NO18G00150|organism=Nannochloropsis oceanica|type=gene|length=7074bp
GATAATGGTGATGCGTAAGTATATGTGGCGCATTGAAAGAGAGAAGAAGG
GACAGTGAGGAAATTAAAAAGGAGGAAGGGATGCAGATGTGACTGAGAAA
AAAAGTAGTGAATTGTTTTTTTGCAGTCATGCCGTACGAGAACCCCTGTG
TGTGATGAGACTTAAGTTCTTTCCTTCTTTCATTTGTGAGTTTGACGTTG
CTCTCAACCAGACCGAGGTTTAGTCGCAAAGCCATACAAGATTTCTCATT
TCTTTCACCCCTAGTAAGTCTGATATTCCGAGGGCACGATCAGAGACATT
TTATCCTGAGGAAGTCGCCATAGTCGTGAGAGTCGATATAGTCATTATTG
TCGTGCGTAATCGTTGGATTGAACGACTATTAGTCATTTCGATCTCCGAC
GATCATGACGACTGATAATCGTGCATAATTATTGGACAACTGTAGTCATG
CACAATCGCAGGACAGGACGATAAGCGACTGACTACGAAATGTTGGTAGT
CGTCCAACGTGTGGTTGACACGTAAAATTGCCGATCTTCCCATCACCCAT
GAGAAAAGAATAAAAGGACAATTTTTGCTCCACGAGACGTATTTAATTGA
GTTGGTGCTTATGCGTGACTCATGTAATATGGCACAAAAATTACCGCGAC
AAAAATGCATGGAATGCCACAGATGATGCATTATAGCTTATGGTTTCCAG
AGACCTGATGAATCCACATTTCCAGGACAGCGAACGTTCTAAATAGTTCG
ATACTTCAATTTTTGAACTAGTTCGATTTCGATAGTTCGATCTCGAGGCT
CAGGTGCCTCAGATCGAGCTCGAGTCGAACTTTTTAACATTGCCTCGGCG
GGTTTAGAAGGATTATACGGGTGAGTGAGTCTGTAGAGATCAAGAAACGC
TCGATGGTTCTGTCTGGTAGGATTATGTGGATTCTGCTTTCCACCTCGTT
CTTGGGTCCCAGCCATGCACTTTTTAATTATTTTGCCATTTCCGATCCAT
CACACGCGTTCTGCTCCCTCTGTGGCCCTTGAATACGCTGGAGTATGCTC
ATTTGTGATGATCGTTTTTTGAAAAAAAATCGAACTCGGTCCCTCTGAAC
TCGAGCTCAATAGTGAACTCAGAGTTTGGTATTTCGAGCATTCCCTGTCC
CAGGGACCTGTGTCTGTGGAGGTATAAATTAACATACGCATGCTGCATGA
GCTGCCATATATGCCTGATAGTTCACTGATTCCAGCGGCATGGGTAGTAC
ATTCCCATAGTAGCAGCCCATTGCACTTCTATCCATTGTGTCGAACCATG
TCCCACCAACAAGCTCGCAGCTTTTGGGGTTTGAATTGTGATGCATGGTG
CATACATCAACTGGATGACCACGATAAGACCATTTATTTTCTATCAAATA
CTCGATCAGGAGGCCATCGTGGCAGCCGCCAAACTGACCACATTGAGTAT
CAGACTCTTTATTAAATGTTGTAAAAGAGATGTACCCTTTCCGATACTTT
TGATAATCAAATATCACCGCACCAAGATCTATGTAGCCCATTTTGACATC
TGCTACCATGCATCGATAATTTTGAAGTCTTACACAGCACGCCTGATCAT
GAGGAGTATTTGTCGATGAAATCGCACCCCAGATGGAATATCGTGAATAG
AAATTCATCAAAACAAGATCGACATCATTGGGAAGGAAATCCAAAGCATC
GGGAGTGTACCAGTTGTCTCCATTTGTGACGAGTAGCCATTTGAAATCCT
TGCTAGAACCACAATGGTGCTCTATGGCTCTATCCGTTATATCATAGGCT
GAATTAGGATCCTCTGTAAAGCTTTTAGTGGCCGTTAGCGGTGAAATTTC
AATTTTACCTCCGTGTTCATATTGATCCGTGATATGGTGGAGGTCCTCAA
AAGGAATAACATCTGTATTCACGATAAAAGCTCTCCAATTTTTGTGGTTC
AATGCAAGCAACGTGTTGAGAGTTTGATGAATATTGTAGATTCCTGTTGA
GTGGCCTTTATAGGTGCGGACTATTATGCACACTCTATCTTGTCCCGCCC
TTTGGCTCACAGGCATACCAGGGTTCTCATCCAAAGGCACAGAGCTCACA
TAACCATTAGACATGATTTTTGACACATGGCCACGCTGTTCGTCAAAGAC
AGCTTTTTGGACGGCTTCAAGCCATCGCCTTCCCCATTGGATGCTGGGCT
CAATTGCAGCTCCCTGCCCCCAGTCATTCCATGCATTTAAAAACACAAAT
CCACCGGGCTCCGTCCTCGCCAAATTTTGACGTAGCCAAAAATACAAATG
TGACGGATGAAACGGATACATTGTGGCACCATCGGTAGGGTCGGGGTATC
TAGGCGAATTATCAAAGGCGGCGGAAACGCCATAGAAATAGCTGTCTGCC
TTTTTCTGGGTGCTCACAAGGTTGTTCATAGTGAAACCTGACGTCGACAT
GTAGCTTGGGAAACCCTCAACGAGAGAATCCATTCCTGGCTGCAATTTTA
AAGAAGAAGATCCATTCCAGCCTACTCCATTTATTTGTATCACGTGGAGG
CCCGTTAAATTTGAATTCCTCGCCGACATTCTCCACAGACTTATCATTTG
TTCCAAATCGGGAATGTCGACCGCTCTGTAAATGAGGATGACGGGTAGGC
CCTTGTATTTCAAATAATTCTTATGCTTCAGATAAGGCAAGAGCCAATCA
AAGTGAGGCTCCCAAGTTTCTCGGTCGTAAGTCTGATTGAGGAGAACCTC
TGATCCGTCATTTCCATTCCACCGTCGTGTCCAAGGCTCGTTTGCCCAAG
TTAAACAGAAGGGAATGTCAGGGTAGCCGTCTAAGAGCATCAACTCCAAT
GGCTTCGTCATTATAGCTTTGGTGCCGAACCAGTAATGGTATATAGCAAA
TCCATGAATATTATACTTTCTTGCTAGTTCCCCCTGGAAACGCCGTTGGC
TGGGAGACACCAAGTCATAGAAGCCCATTCGTTCGGCAGGCCTAATAATT
GCCTGACCGTACCGATTTTGGTGAACCTTTGCGACATTGGAGAAATCTGT
GAAGCCTTTCCCCCAAAATTTGTTGTTCTCCTCAATCTCGTGGAACTGAG
GGAAGTAGACAGCAATTACTTTTTTATCTTGTCCTACAGCCAAATTGGGC
GTTTGAGTCCTTTCAAGAATTTTGGCCGGTAGATGGAGTTCTCCCTCTTC
CAAATGAGTCATTTTCCCAATGAGAAGAAAGGCGAAGAAATGTAAGACAA
AGGCATATGCCATGATAAATTTGGATCGCCACATGATGAAGGCAAATGAC
GATAGCCTGGCAAGTTTAATTTTTGAACTAGTTCGACTTTGATAGTGTGA
TTCCGAGACTTGGATGCCCGAGTTCGAACTTGAATCGAAGTGTGTGTATG
TGTGGTGGGCATGTAGTAATCAATCGCAAGACCTTCTCGGAATCATCAAT
CGCAAGTCTTATCCAAAAGCAAAGATCATCAAGTTAAGGTTAAGATCTCA
TGATCGAGCCGCAAAATCACCATTCCCTACCATATGGGGATGATGAATCA
GAAAGATTCAGAGCCTTCATAGCTCTTCGTCACTCTTCCATTCTATTTCC
TCTGATCAATCGTGATTCCATTATATTCAGACAGACAGATTCTGGATTTA
GTTTGCTCATGAATTACATGTTTTTACTGTTGAGGACAGACGTGACGATA
ATCACACCGCGCGGCCTTTCCGCTTGTCAGCCTATCTCAAGTTGTCCAAG
GTAGCAGCAATAAAGCCCGAAAAAGTAATCTGGAATAATATCAGGGACTT
AAAGAACCTATGGTTCGACCATGAGTGACTTAAGTGGGACTACATACATG
TGTGTTATTCCAATTATTCTTTTTGTCATTCTTTGCGAATGAACGAAGAA
CAAAAGCGCCCGTGCTCACAATTATTGAAATGCCACAGCTTCTTATCCTG
CCCTTGCGCCCCGATCTTTCAGTACTCTCTTATCTCTCACCTTTCAATCT
TTTCCATGCACTCTATTTTTCCTGTGGCCCTTGAATACCCTGGGAAATGC
TAATTTTAAATGAACTTTTTTCAAATTTTATTTCGATCTCAGGCCCCTGA
ACTCGGATTTCGCGAATTCAACCATTCCCTGGAAGCAAGAAAGATATGAC
ACGATCATGGGATTATGCCCTAATGACGATTGTCTTCATCACCATAATAT
TCGCTGTGGAGCTGTGGAGGTCTCCGGATGCAAGCATGCTAAATTTGCAG
AGTCACCAAAGTGAAAAGTCCTGCCTTCACGAGTCGATTCTATGCGATGC
TTCTATGGATTATTCCTACTTGATGAAATCCAATCCAGAGGCTGCGGCCT
TATGGAGGCCGTGTCGTGTGAGATTACCCAGAAATGATGGTATTGCAGAT
ATCCCTTTCGCAGAGGGGGAGCAGGATGCGTTTACTGTCCGCGTCTGCGC
CTCAGCGGGCGAGATATATCTTCACGTTACTCATCACGAGCTACGTGATT
GCATGGTCCCAGGCGCCGCCACGATTGAAGAGATGGGACTGTCTCATACA
GATGCCGCCAAGGACTACATCGAAGTGCTGTTAGATGGCCCTGAACGACG
TTTGCGGCGCTTAGACTTCATGTCACATACTGTGCCTCCAAAGGCGATAG
ATCCCTTAATAGGTGACTGTGTATTTACATTACGATTACCCATATATTTA
AGTGGAATGTACCGAGTCCAAATTATCGTGGTCCATAGTGACATTGCATT
AACAGGCATTGAGCCATACCGTAATTACGTCCTCTGGGACCGTTTTCACA
TTTTGTCGGCCAAAAGTCTTGACCAAATTTCTTCCGAGCGGAAAAATGAT
GGTCTTGAGGCATGGCATAGTACAGGCATATGGATGCGAAGAGGCGGGAA
AAACTTCCCAGGCCATCACTCTGCACAGGCCTTGGTAGCCCAAAAGTGGA
ACAACGAATCGTACCGGTGCCCAGCAGACGGGACAGCGTCATTTACTTGG
ATGCCCTATGCAAATGACCTGCCGAGGGAAACCCTTCCCTATAATATGCG
ACAACGAAGCATATATAGGCCTCTCAACCCCTCCGAAGCGATGGCATGTG
CGCGTGCTCTGGCTCCCCAACATATGTCTACATACCCCAAGCTGGTCCTG
TTTGGCGACAGCCTAATGCGTCAGACTTTCAACGCCGTCGCATCGGCAAT
TGGAATGGAAAATGTTACAGCCATCAAGGAATTCAAATCGCTGATGGAAA
GCCAAAACTGGGGTGGGCCATCCATTGGCCTAGATCTCTCCTTCCAGTGG
GCTGCGCGATCTAATGAAGGCCGAGACACACgtaaggaagcatcgataag
tgcactattattcgggttgcttaatgtcacacaagatacccttatcctta
tttccgatcacatgatactcataattgcagTGAGAGCATTGCTTGAACAA
GGCGCGTACGTCCTTGTCAACTACGGTGCCCACCCACTATGTGACGGCAC
CATGCTGGATAACCTTAGGATGTTCGATGATTGGCTGGAATTTCTTTTGG
ATATCCTTAAAAATCTGCCGGTCGACACACGGGGCAGAATTGCATGGCTA
GGTTCCCACGCAAGGCCCATCATGGGATTTCATAATCTATGTCCCACTCC
GTAAGTGTTTAAGTAGATTTCTTTTTCAAAATTGTGGCTCCATCCGGCGT
CTTGCGTGCCCTTTATCTCTTTTTTGTGGCGTCTCACCAAAAGTATGCGC
CCTTTGAACGTACCTAAAGCACGATATATGTCAGAACAGCAGCGCGGGAT
CAGGCGTGGGTACATTACACTCGTACAAAATTGACCGAGGTTGGCATCCA
GTATGTCGACGTATATAATCTTATTGAACAGTTTCGCGACTGCACCCATG
ACGGATCTCATCACATTCTTGGTGTCCCAGAAGCCGTAGCTGATCACCGG
ATCATTCCATGGATTTGCAGCTTGCACGATTGAGGTAAGGAGAAAATATT
GAAGAAACATGGGCCAGTCATACAGGATCAATGAAAGAAATGAGTCGTCA
AAGGAGGAGTAGCAGCAAGAGGAGCAGCAGCAGGACGACGATAAGGAGGA
GGGAGATGAGAAGGAGAAGGAAACTGAAGAGAAGGAGAACCAGGAGGAGC
AGGAGTAGGAGCAAGAGTTCCAGAAGGAGGACCAGGAGGAGCATGAGGAG
GAAGAGGAGGAAGACGAGGAAGACGATGGTTAAAACGACGAAGAAGATGA
CAGCGATGATGTGAGCGATGTAGCTGTCTTCAAGTCTGATGGCAGGGCGT
CGAACAAGTCAATCATTGCCGATCGGAGCTCTTTAAAATGATTGTTTCAC
TGTATTGATCCCAGGAATAACTCCAGGACGACTGCGAGAGGCTTGTCAGA
TCTAAAGGAGGGCTACCTTTTAAAACGGAGCCGCAAATAGTCGGAGGAGG
CCTATAACACACGCTACACAAAGCGGGGCCGCTTTTTGAGGTCAAAACGG
TGATCCTTGACGTTATTTGCCACGCTTGTTGGAACGTCATTGCCTGCCAT
GTATGCATATCTTTGACGATCGGCGAGAAATGATGATAATGTATGGAAAG
CTTTAAAACGATGACAAAGGGTTCCATAACTTAGAGGTTATGATACTAGT
TTTAGGCGTTGGAGGAAAGTGTCAGCGATATCATAGGTAGGTAGATTAAG
CTGCTCTCGATAGAGGAAAAGCAGTTGCATGTGGGCAAACCTCTCGAGGA
CACATGAGCATCAGATATTGCGCAGTGTTAAAATTTGCACTGCGTCTGCA
GACGTCTTATTGTGGATAAAGGCCGGACATTTAGGTTGGGCTGAAATAAG
AGGGTGCACAGAAATTCTCCAAGCAAGAGAAGCCAGAAGTCGCGAAATCT
TATGCCGTCAAATAGGTCTCGCGGGGATGGCGAGTCAGACAACACGAGCT
GCAAATGGTAAAGGTCGTTGGACCGTGATGTAAACATGACGTGATGAGGT
CCTTTTATTCTTTTAGTATTCTTTGCAAAAAATCGAAGAACAAAGGCGCC
AGCTTTCACAACGATAGACATGAA
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protein sequence of NO18G00150.3

>NO18G00150.3-protein ID=NO18G00150.3-protein|Name=NO18G00150.3|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MTRSWDYALMTIVFITIIFAVELWRSPDASMLNLQSHQSEKSCLHESILC
DASMDYSYLMKSNPEAAALWRPCRVRLPRNDGIADIPFAEGEQDAFTVRV
CASAGEIYLHVTHHELRDCMVPGAATIEEMGLSHTDAAKDYIEVLLDGPE
RRLRRLDFMSHTVPPKAIDPLIGDCVFTLRLPIYLSGMYRVQIIVVHSDI
ALTGIEPYRNYVLWDRFHILSAKSLDQISSERKNDGLEAWHSTGIWMRRG
GKNFPGHHSAQALVAQKWNNESYRCPADGTASFTWMPYANDLPRETLPYN
MRQRSIYRPLNPSEAMACARALAPQHMSTYPKLVLFGDSLMRQTFNAVAS
AIGMENVTAIKEFKSLMESQNWGGPSIGLDLSFQWAARSNEGRDTLRALL
EQGAYVLVNYGAHPLCDGTMLDNLRMFDDWLEFLLDILKNLPVDTRGRIA
WLGSHARPIMGFHNLCPTP*
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protein sequence of NO18G00150.2

>NO18G00150.2-protein ID=NO18G00150.2-protein|Name=NO18G00150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp
MTRSWDYALMTIVFITIIFAVELWRSPDASMLNLQSHQSEKSCLHESILC
DASMDYSYLMKSNPEAAALWRPCRVRLPRNDGIADIPFAEGEQDAFTVRV
CASAGEIYLHVTHHELRDCMVPGAATIEEMGLSHTDAAKDYIEVLLDGPE
RRLRRLDFMSHTVPPKAIDPLIGDCVFTLRLPIYLSGMYRVQIIVVHSDI
ALTGIEPYRNYVLWDRFHILSAKSLDQISSERKNDGLEAWHSTGIWMRRG
GKNFPGHHSAQALVAQKWNNESYRCPADGTASFTWMPYANDLPRETLPYN
MRQRSIYRPLNPSEAMACARALAPQHMSTYPKLVLFGDSLMRQTFNAVAS
AIGMENVTAIKEFKSLMESQNWGGPSIGLDLSFQWAARSNEGRDTRKEAS
ISALLFGLLNVTQDTLILISDHMILIIAVRALLEQGAYVLVNYGAHPLCD
GTMLDNLRMFDDWLEFLLDILKNLPVDTRGRIAWLGSHARPIMGFHNLCP
TPTIYVRTAARDQAWVHYTRTKLTEVGIQYVDVYNLIEQFRDCTHDGSHH
ILGVPEAVADHRIIPWICSLHD*
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protein sequence of NO18G00150.1

>NO18G00150.1-protein ID=NO18G00150.1-protein|Name=NO18G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MTRSWDYALMTIVFITIIFAVELWRSPDASMLNLQSHQSEKSCLHESILC
DASMDYSYLMKSNPEAAALWRPCRVRLPRNDGIADIPFAEGEQDAFTVRV
CASAGEIYLHVTHHELRDCMVPGAATIEEMGLSHTDAAKDYIEVLLDGPE
RRLRRLDFMSHTVPPKAIDPLIGDCVFTLRLPIYLSGMYRVQIIVVHSDI
ALTGIEPYRNYVLWDRFHILSAKSLDQISSERKNDGLEAWHSTGIWMRRG
GKNFPGHHSAQALVAQKWNNESYRCPADGTASFTWMPYANDLPRETLPYN
MRQRSIYRPLNPSEAMACARALAPQHMSTYPKLVLFGDSLMRQTFNAVAS
AIGMENVTAIKEFKSLMESQNWGGPSIGLDLSFQWAARSNEGRDTLRALL
EQGAYVLVNYGAHPLCDGTMLDNLRMFDDWLEFLLDILKNLPVDTRGRIA
WLGSHARPIMGFHNLCPTPTIYVRTAARDQAWVHYTRTKLTEVGIQYVDV
YNLIEQFRDCTHDGSHHILGVPEAVADHRIIPWICSLHD*
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Synonyms
Publications