NO18G00100, NO18G00100 (gene) Nannochloropsis oceanica

Overview
NameNO18G00100
Unique NameNO18G00100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5904
Alignment locationchr18:45377..51280 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:45377..51280 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00100.7NO18G00100.7-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00100.6NO18G00100.6-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00100.5NO18G00100.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00100.4NO18G00100.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00100.3NO18G00100.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00100.2NO18G00100.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00100.1NO18G00100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00100.7NO18G00100.7Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00100.6NO18G00100.6Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00100.5NO18G00100.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00100.4NO18G00100.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00100.3NO18G00100.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00100.2NO18G00100.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00100.1NO18G00100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605414gene_9779Nannochloropsis oceanica (N. oceanica CCMP1779)gene


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00100 ID=NO18G00100|Name=NO18G00100|organism=Nannochloropsis oceanica|type=gene|length=5904bp
CGGAAAACTCGTTTCTTCTTTTTATGTTGGTTGTTGGACCTTTTCAAAGA
GTCCCAGTGGTCCTTCGCTCATTCTGATTTTTCCTCGGAGGCGAGCTTTT
CCTTCTTCATTTCGTGAAAAAGGTCAAACGCAGTCTTGATATGGATGCTG
TTGGACTCCCGATGGCTGGACAGGCGCAGTTGACTTTCTTCTCCTGTTGA
AATGGTAGTATCAGATCCCTCAATAGTGAAAAATGAGGGCACAGCAACAA
ATAAATTCGAGATAGCACCGTAAATGTAGAGCTCGGCTTGGTCGCCCCCT
CTTCGAAGACAAATCTGTCCGTTCTCTGTACTGTCAGTAAAATAGGCATC
AAGTATCTTTTCCATTCCTCTTTTGGAAATGACATACGCCGACGTGCCGA
ACTGAAACCGTGTTTGCAAGATATGACGGCGTGGACCAAAATTATGCGCA
CCTCTATCATACAAGGTCTTATCCATGCCCCAAATCCAAGCCATTTGAAC
CATATCCCACGTGCCCGTTGAATAGTTTCCTGCTTCGTTGACTACATCAA
TGAGTGAACATGTCCAAAATGGCCTACAGGTGGAGTGAATATAATGTGCA
TGTAAGGGCAAGAAGTAGAAATTTAAGTTAGCCATCCTACGAGCACTAAC
ATGAGTAAGGGCGTGATATCATCTTCCACAATCATCGCGATCTCGTTCCC
TTCCAGATATGCGCGTTTTATCGCCATGAGATGCGATAGTATACAGCCAA
GCTCTCCGCCATTTATAGTGCCTTGACGTCTTTCATCTGAGATGGACGGA
GCTATTTCGTCGTAGTTTGCTCGGCCCATGAGCTGGAGCACCATATCTGT
ATCCGTTCCGTCCACGGCAGGGCTCCGTCGTAGGTCCCATATACCGCCGA
AATCGAGCTCCATCCTCTCTCGCCGCGCAGAGCTCTGCTCCATGTTGATA
TAATACACTGGGAAGGGAAGTGCGTAATTAACGTAACCAGCAAGAAGGGT
AGAGTCTGATCTGTAGAATAAGGTGATTGCCCAGGCACGGTCAGACATGT
TGAGAGCTGGAGTATCTTCTCTGGACGTACCTTAATTCAGAACATCGGGT
TATAGATAATTGTTGCAGTGCCATGAGGAACAATGTCCACGTAAAGAACA
TGAAGAGAAATGCGGTAGTGAGGGTACCTGGAGCAAACAGGAGGATCGAT
GGCGCCATAGTTTGTAAACGGCGAGGATGCGCTTTGAGTTCGAATAATGC
CATGTTGCTTTTGGTAAGACAGCCAGTTTATCTGCACAGTACGTGAGAAT
AGATACTAAAAATGTGTTAGGTTTGAAGATGATTTCCACCATTCACTTTC
GTTTATATATATATATAAATTTAATGTATAATTCAAAACACCAAAGCGAG
GAAGGAGGCTTCCTATACAATTCTCTAAATTCCGCATGACATAAATCCAT
TTATATTTTTTTGGAGGCCAATCTCAACCCCCCGAAACCAATCTTATAAT
CAACGACGGTTTGACTTGTGTAATAATTTTTTTGAAAACGTGAGATCTGA
GCTTACTTCTGAAACCGCCGTCAGGCGGACTATGTTTGGTAACAAGTGTC
GAAAATTTTGTGACTGACCTCGCGTACACCCTCCATCGGATCTACGCGAG
TGGACATCTGGACTCCCCGCGTCTATCCGAGGAGGAAGAACTCTACTGCT
ACCCGGTGCACTTGCATGCCTCGAAGCCTCTTCATGCACAACTACAACTA
AATCACGTGGATCCATGTAGTTATACTACTTAGAATAACTGGCCTTTTCA
CAGAAAATGCGTCCCGTTTGTGATCACGACAGGATTTCTACTACCGATTC
TTATGCAATAACTACGATGAAGTTGCGTCAGGTCAATTTTTTTTTTGTTT
CCTCTTCTCATAGCTCTTTGCATTTTTCTCCAATTCACCACATCTCATGT
AAACCAAAATGGCAGGAGCAAATGGACATTGCAAACGACCAGAAGCCAAG
ACCCAGGTCAGCTCAGCTTTTGCTGACCTTCCGGCAAGGCATTTTCATCT
CCACATGCCTCTTTACTTTACTGGGCTTTTCAAATATTTTGCAAgtaagt
tggatatataagagaacgacaaccaaggtatacgtaatatttacattctt
ttgtggcatgttttatgaaattacagACTCAAATACTGGCTGCCCAGAAG
AAATCGCAAATGAACCCTCAGGCGGTAAGCGCGATGTAGCGTGTAACATT
GTCATCATCATGCCCATAACTCCATGAAACTATCCCTTTTTTTTAAATGG
ACCAAACATTCTCCGAAGCCTACAGCACTGGATAACTCGTACTCGGGGCA
GCTGCCCACATGCGACTTTCACCTTGATGATATCGATCCCGCATGTCCGC
GATTTGTTAATATTCGATTTCGTACGTGTTATTTGCCTCTTCAACAACCT
AGTTCATCTCCTATTATGCATGCTACTGTATCGTTTATTTACTTATTTTT
TATATGATACAGGATGGTTCGAGCGAGCAGGGCTGGGAGACCGTTTCTTC
CAATTAATGGTCGGACTTACCTATGCACTTCATCTCAACGGTACATAAAA
TTCTTTAAATTTCACTGCTGTTGCCAGCATCATCAAGAATTTGTATTTGC
GCAAGACCACTCCCACTTTCGTACAACCCATTTCACAGCTTTCCTTGTGA
ATGTAGACGCAGAGATGAGTACCAACTCGACTCATGGTGCTTACGACTGG
GTGCCCAATTTCTTCAAATTAAACTATATCAACTCGAACATGACAATGGA
TGTCATAAAAGATCACTACAGCAATTTGACAATTGTAGAGCGAGTGGAAG
AGgtaaaatgctttacggcaccctgaataatttcaaaccttgttaggaat
taattttcaccccaacccaaccagTACGGCAGCAGCTACGGGGAGAGAAT
TCAAGCGCTGGGGTCGCATTGCAACACTGTAATACAAATTGATAACGACg
tgcgtaaaaataaagagacagaggacatagacaataaaataaataagaca
ctttaaaattaacacattctcgaatcgtgacagGATTGCGTCGGAGGACG
GGAATGCTATTTCTCTTCCGATCCCAAAATTTATGAGCACATGCGTTACA
TTATGGGCTGCTGGTTCTTGCACACCGATCGGTCAAATCTACCCGTACTC
ATCTTTGAATCGGGTTGGTATAATGTCGCTATTCATgtaagtcttaacgc
aatgtctttcgaaggccagtcctcccccccccaatttcccaccaaattaa
aatcatgacctatcaatttatcttccagCTACGCGTTGGTGACGTGGTGT
TGCTTGATGGTGACCAAGGCAAAGGATTTTTTTCGAGGCTCAAAAGCCAG
CTCGACACCGTGCTTACCTTTTCTCCTGTCCATTACTTTTTCTTTGCGGA
AGCGCCTAATGACGAATCGGTAAATGAGCTTCTAGTTCCCCCTGCTGGAT
TCGACTTTTTAGCTGACATATTTGGGAACAGAAGTCATCAGAAAGAGGGT
GTTTCCTCACATCGTATGTCCTATATTAAGCATATGGGTGTCAAAGAGAC
ACTTTACCACCACATGAATGCGGACATGGTTATTGCCACTGGCTCCTCGT
TCCCATTGGTTGCAGTTACGGTGTCGTCTAAGGTATGTGGGCACTTAGAT
GACGCTAATTTTGGTTCTTCCACCATTTTCCCACCTTATACACGCTCCTG
CTTTTTCCAGCCCGTAGTGCTATTCACCAAATCAAAAGAAGGAGGCTTTT
ATCCCTCCCAGATGCGAGCGGATTATGCAATGATTGGGGATGACGGGACA
ATCTTATCACCCACGATTGCAGAATTGTCGGCACAAACACTCATGCGATT
CCTAGAAGTACACGATAAAGAAGTGCCCTATGGGTGAAACTTTCAATTTA
CGCGAGGTAGGTGATGAGGTGAACGCCACAACGAGATTAACTCTTTCTAT
ATTACCTAGATAGAATGCAATCGTCAGTCAGTCAAAGTCTAGGTATACGG
AGTGAAATGGAGGATGACAACCGTTATGTGCGCGTCCCCCAGCGCCTCCC
GGCGGCCCGCTCAAGTACAGCTGAGACTCTCTGCACCTGTGAGAGCGGGA
GGGAGTGACCACTCCGTGGCACCTAGACCGCAAACCTTTGTGACTAGATG
GGACATCGGGGAGACTTTGACTTACTTGTCAATGTAATCTTAGTTTGTAC
TGTAAGTAAAGTGAATGTACTATGCCCTGATACGGATCACATCGTATGAC
TTCAGTAGAGGCACGAATCAATGCGGTCAAGCCGGCTACAAACTTAGGCT
AGACTTGGCGTCAACCTTCTGCGGAAAAGCCACTGGCCTGATACCGGCAT
CTATCCCGTCACGGGGCGGGCTTATTTTGATGCTCCTAGATAGTCGTAGA
TGCCATTATGCCGGTGGCAAAACGCGAAATGGTAACTTAACCTCCACAAA
ATGAAAAGAACAAAAACTTACTTACACGTCTTTCTGTATAGTCCGTGTCT
CCATTTTGGCGCTGAGACTACATTTTCGAACCCTCCATCGTCGCCGTACG
GTCTGGCTATATGTCTTCGAGGAGGTGCTCTATGTCAATGTGTTCCTTGT
TGCTCAGCTAGATCTTCAATTTGCGGAGTCATGCAGCTCATGGCATCGTC
GAATAAGTTTGCCTTAAAAAGTCTAGGTTCAAAGTCTTTTCCATCACATT
GCTTTGATTTCAATATTTTGAGCAAAAGCGCCAATGACCCTTTCAGGTCA
GATAGTGCATACGGAGAAGTAGGGAATGATGCTACGACGCTGATGTTCTA
AGTAACATTGTCCATGTTTGGTGTCGAAATGCATCAAAACACTCGATTGA
GACAGGAAGAGTGCGCGTAGAAGTAGGAAATGGTGCCGTAATTTTAATGT
TCTATGTTACATTTTCGATATTCTGTCTTGAAATGTGTCAAATGACTACT
TATAGACATAGAACATATGAGATCAAGCGGGTAATCGTGCCATTATTTTG
ATGTTCTATGTTAAATTTTGTCTGTTTTGTCCCCAAAAAGAGCCATGGCA
CGAGAAGATCCGTCTGCTTTAGGGTCACACGGCTATTCTGCGGCTAAAAT
CCGACATAGTTGCCGAGCTCTATTGCATCTGCCCTGGCTGTCTCCAAAAG
GTCCTGTTTCTCCGTGATATTTAGCATCAGGCTTTCTCTTATACGTACGC
CTACCTGTCTCATCGAATCTCTATTTCTTCAGGTGCTCCCGAGTATCATC
ATCAGCATTTCTCATCATGTCTTTGAAGTCAATATAGGCTTTCACAGCCA
TACAGCACTGGGAATACTTACGCTGTACAACCTTGAGTCGCCCGAGCCAG
CAGCGATTGCGCCCGACGGTGTCATCAATGACGACATAGGGCACATAGAG
GAGCTATGGTTGGACTTAAAGTGACTGAAGTAGGATTCCATAATTGTGTA
TTACTCGAACAATTTTGGGATTGTTTTTGGTGCACTGGAGAAAGGATAAA
AAGCAATGACAGAAAGTGTGTTGGGCAATTTGTTTAGGATCACCCACCCT
TTTTTATAACAAATGCTGAAAATAAAGCCGGCGGGGTTGTGTTCCACCGC
CTCATCCGGCCAAGTCAAGGAGCCGTAGTGCTGGCAAGCCACTTAAGCAC
CCAAGTGATGTGGTTGTTAAGCTCTGTCTAGGAAGTCAAACTCGTACGTG
GGCACGATGCTCGCGTGGTTGATGAAGACGGCGACGAAGACCCAACTGCT
GCGCATCATTTTCGTCTTGTTCATTACCACTTATATGACCGTTTTTATCT
TCTTCACAACCATTCACGCCCCCGCCCAGGCGTACAACAGGCACGGCGTT
GCTG
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protein sequence of NO18G00100.7

>NO18G00100.7-protein ID=NO18G00100.7-protein|Name=NO18G00100.7|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MVRASRAGRPFLPINGRTYLCTSSQRYIKFFKFHCCCQHHQEFVFAQDHS
HFRTTHFTAFLVNVDAEMSTNSTHGAYDWVPNFFKLNYINSNMTMDVIKD
HYSNLTIVERVEEYGSSYGERIQALGSHCNTVIQIDNDDCVGGRECYFSS
DPKIYEHMRYIMGCWFLHTDRSNLPVLIFESGWYNVAIHLRVGDVVLLDG
DQGKGFFSRLKSQLDTVLTFSPVHYFFFAEAPNDESVNELLVPPAGFDFL
ADIFGNRSHQKEGVSSHRMSYIKHMGVKETLYHHMNADMVIATGSSFPLV
AVTVSSKVCGHLDDANFGSSTIFPPYTRSCFFQPVVLFTKSKEGGFYPSQ
MRADYAMIGDDGTILSPTIAELSAQTLMRFLEVHDKEVPYG*
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protein sequence of NO18G00100.6

>NO18G00100.6-protein ID=NO18G00100.6-protein|Name=NO18G00100.6|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MVRASRAGRPFLPINGRTYLCTSSQRYIKFFKFHCCCQHHQEFVFAQDHS
HFRTTHFTAFLVNVDAEMSTNSTHGAYDWVPNFFKLNYINSNMTMDVIKD
HYSNLTIVERVEEYGSSYGERIQALGSHCNTVIQIDNDDCVGGRECYFSS
DPKIYEHMRYIMGCWFLHTDRSNLPVLIFESGWYNVAIHLRVGDVVLLDG
DQGKGFFSRLKSQLDTVLTFSPVHYFFFAEAPNDESVNELLVPPAGFDFL
ADIFGNRSHQKEGVSSHRMSYIKHMGVKETLYHHMNADMVIATGSSFPLV
AVTVSSKPVVLFTKSKEGGFYPSQMRADYAMIGDDGTILSPTIAELSAQT
LMRFLEVHDKEVPYG*
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protein sequence of NO18G00100.5

>NO18G00100.5-protein ID=NO18G00100.5-protein|Name=NO18G00100.5|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MVRASRAGRPFLPINGRTYLCTSSQRYIKFFKFHCCCQHHQEFVFAQDHS
HFRTTHFTAFLVNVDAEMSTNSTHGAYDWVPNFFKLNYINSNMTMDVIKD
HYSNLTIVERVEEYGSSYGERIQALGSHCNTVIQIDNDDCVGGRECYFSS
DPKIYEHMRYIMGCWFLHTDRSNLPVLIFESGWYNVAIHLRVGDVVLLDG
DQGKGFFSRLKSQLDTVLTFSPVHYFFFAEAPNDESVNELLVPPAGFDFL
ADIFGNRSHQKEGVSSHRMSYIKHMGVKETLYHHMNADMVIATGSSFPLV
AVTVSSKVCGHLDDANFGSSTIFPPYTRSCFFQPVVLFTKSKEGGFYPSQ
MRADYAMIGDDGTILSPTIAELSAQTLMRFLEVHDKEVPYG*
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protein sequence of NO18G00100.4

>NO18G00100.4-protein ID=NO18G00100.4-protein|Name=NO18G00100.4|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MVRASRAGRPFLPINGRTYLCTSSQRYIKFFKFHCCCQHHQEFVFAQDHS
HFRTTHFTAFLVNVDAEMSTNSTHGAYDWVPNFFKLNYINSNMTMDVIKD
HYSNLTIVERVEEYGSSYGERIQALGSHCNTVIQIDNDDCVGGRECYFSS
DPKIYEHMRYIMGCWFLHTDRSNLPVLIFESGWYNVAIHLRVGDVVLLDG
DQGKGFFSRLKSQLDTVLTFSPVHYFFFAEAPNDESVNELLVPPAGFDFL
ADIFGNRSHQKEGVSSHRMSYIKHMGVKETLYHHMNADMVIATGSSFPLV
AVTVSSKPVVLFTKSKEGGFYPSQMRADYAMIGDDGTILSPTIAELSAQT
LMRFLEVHDKEVPYG*
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protein sequence of NO18G00100.3

>NO18G00100.3-protein ID=NO18G00100.3-protein|Name=NO18G00100.3|organism=Nannochloropsis oceanica|type=polypeptide|length=506bp
MRPVCDHDRISTTDSYAITTMKLRQVNFFFVSSSHSSLHFSPIHHISCKP
KWQEQMDIANDQKPRPRSAQLLLTFRQGIFISTCLFTLLGFSNILQTQIL
AAQKKSQMNPQAPTALDNSYSGQLPTCDFHLDDIDPACPRFVNIRFRWFE
RAGLGDRFFQLMVGLTYALHLNAFLVNVDAEMSTNSTHGAYDWVPNFFKL
NYINSNMTMDVIKDHYSNLTIVERVEEYGSSYGERIQALGSHCNTVIQID
NDDCVGGRECYFSSDPKIYEHMRYIMGCWFLHTDRSNLPVLIFESGWYNV
AIHLRVGDVVLLDGDQGKGFFSRLKSQLDTVLTFSPVHYFFFAEAPNDES
VNELLVPPAGFDFLADIFGNRSHQKEGVSSHRMSYIKHMGVKETLYHHMN
ADMVIATGSSFPLVAVTVSSKVCGHLDDANFGSSTIFPPYTRSCFFQPVV
LFTKSKEGGFYPSQMRADYAMIGDDGTILSPTIAELSAQTLMRFLEVHDK
EVPYG*
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protein sequence of NO18G00100.2

>NO18G00100.2-protein ID=NO18G00100.2-protein|Name=NO18G00100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=327bp
MRPVCDHDRISTTDSYAITTMKLRQVNFFFVSSSHSSLHFSPIHHISCKP
KWQEQMDIANDQKPRPRSAQLLLTFRQGIFISTCLFTLLGFSNILQTQIL
AAQKKSQMNPQAPTALDNSYSGQLPTCDFHLDDIDPACPRFVNIRFRWFE
RAGLGDRFFQLMVGLTYALHLNAFLVNVDAEMSTNSTHGAYDWVPNFFKL
NYINSNMTMDVIKDHYSNLTIVERVEEYGSSYGERIQALGSHCNTVIQID
NDDCVGGRECYFSSDPKIYEHMRYIMGCWFLHTDRSNLPVLIFESGWYNV
AIHVSLNAMSFEGQSSPPQFPTKLKS*
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protein sequence of NO18G00100.1

>NO18G00100.1-protein ID=NO18G00100.1-protein|Name=NO18G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp
MRPVCDHDRISTTDSYAITTMKLRQVNFFFVSSSHSSLHFSPIHHISCKP
KWQEQMDIANDQKPRPRSAQLLLTFRQGIFISTCLFTLLGFSNILQTQIL
AAQKKSQMNPQAPTALDNSYSGQLPTCDFHLDDIDPACPRFVNIRFRWFE
RAGLGDRFFQLMVGLTYALHLNAFLVNVDAEMSTNSTHGAYDWVPNFFKL
NYINSNMTMDVIKDHYSNLTIVERVEEYGSSYGERIQALGSHCNTVIQID
NDDCVGGRECYFSSDPKIYEHMRYIMGCWFLHTDRSNLPVLIFESGWYNV
AIHLRVGDVVLLDGDQGKGFFSRLKSQLDTVLTFSPVHYFFFAEAPNDES
VNELLVPPAGFDFLADIFGNRSHQKEGVSSHRMSYIKHMGVKETLYHHMN
ADMVIATGSSFPLVAVTVSSKPVVLFTKSKEGGFYPSQMRADYAMIGDDG
TILSPTIAELSAQTLMRFLEVHDKEVPYG*
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Synonyms
Publications