NO18G00090, NO18G00090 (gene) Nannochloropsis oceanica

Overview
NameNO18G00090
Unique NameNO18G00090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length881
Alignment locationchr18:43333..44213 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:43333..44213 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00090.1NO18G00090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00090.1NO18G00090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00090 ID=NO18G00090|Name=NO18G00090|organism=Nannochloropsis oceanica|type=gene|length=881bp
ATGTCAGTGATCGACGAGAATGGTCTTCTTCCTGGTCTCCCTTTTCATGA
GGAGGAGGAAGAGGAGATTGAGCTTTATCTCCTCCATCACGACGAAGAAC
AACAGGAGGAGGACGAAAACGACTTCCAAGGTTTCGACCTCGAAGTCGAG
GACGACAAGATTAATGATAACAACAGCTCCATCACCAGCGACACTGATGC
CAGTGCCATGGCCAAGCGGAAACAACTTCTGACACCGGCACCACCCGTAC
AAGAAACAAGCTCAGTAGGAAGCCTTCGGGGATTGCACTGGCCTTCGCGA
AGCCAGACGTCTCGCCGGAAGAGGCTGAGGAgtacgtcaagaaacatctc
atgccagacgctatgctgagggagggtaattggagaatcaaagaggcacc
gagataccatgctaatcgcagcccaatctggacatatggggttatgtacg
acaggccggccgtggggagcgtgactgcacagcggcggtggtagtgcttg
gcgacggagacttgtcgtataggcaacgtgtccatactttccggcctagG
AGCGGCTGGAAACTGCAATATCCATCTGAGAAGTGTCCATAACATCGTCA
GCGTTCGCAGTAAGTCCATGTCTGCGAAAAAGGGGCAGGATCAGGGGCAG
TTACAAAGGTGCGGGATGGAGGAAATGAAAATGATTGACGACAAAGGAGT
AGATGGCGGCCAGCGATACGACAAGCTAATTTTCGTCAAGTATGTCGTAA
CTGGATGTTTCCAGCCCTTCAACTATTTGGAGAGCTCCTGGATGCGGCAC
CACTACAAGCAGCTGGTCTCCACCAATCCCGTCCAGGGCTTGCACCCGAA
AACCATCAAGCACCTAATGACAGCGCGATGA
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protein sequence of NO18G00090.1

>NO18G00090.1-protein ID=NO18G00090.1-protein|Name=NO18G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MSVIDENGLLPGLPFHEEEEEEIELYLLHHDEEQQEEDENDFQGFDLEVE
DDKINDNNSSITSDTDASAMAKRKQLLTPAPPVQETSSVGSLRGLHWPSR
SQTSRRKRLRRAAGNCNIHLRSVHNIVSVRSKSMSAKKGQDQGQLQRCGM
EEMKMIDDKGVDGGQRYDKLIFVKYVVTGCFQPFNYLESSWMRHHYKQLV
STNPVQGLHPKTIKHLMTAR*
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Synonyms
Publications