NO17G02960, NO17G02960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02960 vs. NCBI_GenBank
Match: GAX73880.1 (hypothetical protein CEUSTIGMA_g1330.t1 [Chlamydomonas eustigma]) HSP 1 Score: 84.7 bits (208), Expect = 7.400e-13 Identity = 77/284 (27.11%), Postives = 110/284 (38.73%), Query Frame = 0 Query: 69 FPFCNYKGKIVYVSDDRQGEAFEHHEILVRMLEQATLHPSIPDSVAVDIEWTVTFQRNEATGKTALLQLCVWEQKEESLNTIGQEIGTVQPSAVETXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLKQSAPPSIPSSLP-PCSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQAL 352 +PF Y G I YV+ + H +L + P + DIEW +F +TAL+QLC E S + T+QPS + T PP L C ++ +L +LL I+K G+NI+ D K+ D+G E + G +EL +AN F L + S +WSL L V + R L+KP +R G WE PL+ E+ YAA D +A+L Y L Sbjct: 81 YPF-TYAGNIHYVTSSTELTWHLGHLLLCK-----------PVVIGFDIEWRPSFTTGVPPNRTALMQLCFCHGTEPSALGTCEVPATLQPSTLSTSTSTLHSGPKIGCL---------------ADSMPPPECRMGLDCTCLLLHVAHAGMQQKTSGHWTLLKKLLESSRIQKAGLNIMGDAAKIKADFGIE------MGGLIELKVMANERCFCNVSL--VTTHQESRRWSLAGLIEVLMHRTLFKPHHLRCGNWEAMPLSREQQLYAAYDAFASLSAYNIL 329
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_011312086.1 (PREDICTED: Werner Syndrome-like exonuclease [Fopius arisanus]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 69/276 (25.00%), Postives = 109/276 (39.49%), Query Frame = 0 Query: 74 YKGKIVYVSDDRQGEAFEHHEILV-RMLEQATLHPSIPDSVAVDIEWTVTFQRNEATGKTALLQLCVWEQKEESLNTIGQEIGTVQPSAVETXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLKQSAPPSIPSSLPPCSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVY 349 + GK+ YV+D FE +L +++E+ HP + + D+EW +FQ +GKTAL QLCV E L+ G + +LP L+ LL H ++ VGVNI +D+ KLGRD+ E ++ ++ AN + S +WSLE L L++++ K +++RK +W PL+ E+ YAA D Y +L +Y Sbjct: 56 FTGKLYYVTD------FEGCAMLCDQIIERIEKHPDVIVPIGFDLEWPFSFQ--TGSGKTALAQLCVSENTCHLLHIHGLD-----------------------------------------------------------------------KLPKGLIVLLSHPRVKLVGVNIKNDIWKLGRDFKEFPSKQVVDNNCIDCGPFANEI------------YKRSCRWSLERLTAYILKKKISKDDKVRKSKWHILPLSEEQKTYAATDAYVSLLLY 240
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_004225815.1 (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Ciona intestinalis]) HSP 1 Score: 79.3 bits (194), Expect = 3.100e-11 Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 0 Query: 202 IPSSLPPCSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQALL 353 I +++ C + F+ +P L +L+ I+K GVN++ DM KL RD+ + ++ELS A+ + +SS WSL+ LC FL+ L K + IR G+W PL+ +++ YAA D YA+L VY+++L Sbjct: 75 ITATIQICPNKKQCFVFQVSKMGMIPSPLKKLIESTEIKKTGVNVIGDMWKLHRDFNIFPDHSLMSQSYIELSHFAS------------STINSSQGWSLQRLCQYFLKSDLSKEKNIRSGDWATFPLSEDQLYYAALDAYASLLVYESIL 213
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_009857891.1 (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Ciona intestinalis]) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-10 Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 0 Query: 202 IPSSLPPCSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQALL 353 I +++ C + F+ +P L +L+ I+K GVN++ DM KL RD+ + ++ELS A+ + +SS WSL+ LC FL+ L K + IR G+W PL+ +++ YAA D YA+L V++++L Sbjct: 75 ITATIQICPNKKQCFVFQVSKMGMIPSPLKKLIESTEIKKTGVNVIGDMWKLHRDFNIFPDHSLMSQSYIELSHFAS------------STINSSQGWSLQRLCQYFLKSDLSKEKNIRSGDWATFPLSEDQLYYAALDAYASLLVHESIL 213
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_015518925.1 (PREDICTED: Werner Syndrome-like exonuclease [Neodiprion lecontei]) HSP 1 Score: 77.0 bits (188), Expect = 1.500e-10 Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0 Query: 209 CSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQAL 352 C + L +LP L+ LL H +R VGVNI +D+ KLGRD+ E ++ ++ AN A + S +WS+ +L + LQ+++ K ++R+ +W +PL+ + +YAA D Y +L +Y L Sbjct: 117 CMDYKICHLLHVYELRKLPAALIELLIHPKVRLVGVNIKNDVWKLGRDFKEFPSQKVVENNCIDCGTFAN------------ATLNRSCRWSMANLTVYVLQKEISKDPKVRRSKWHIQPLSDAQKSYAATDAYVSLLLYNTL 247
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_002949820.1 (hypothetical protein VOLCADRAFT_90238 [Volvox carteri f. nagariensis] >EFJ48923.1 hypothetical protein VOLCADRAFT_90238 [Volvox carteri f. nagariensis]) HSP 1 Score: 75.9 bits (185), Expect = 3.400e-10 Identity = 48/111 (43.24%), Postives = 58/111 (52.25%), Query Frame = 0 Query: 241 KVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQAL 352 KVGVNI D +KL RD+G E +RG +EL LAN Q V T +WSL L L+R L KP +R G WE+RPL + Y A D YA L V+ AL Sbjct: 457 KVGVNITGDANKLKRDYGVE------MRGLLELDGLANERVLQ-HVEHVTTNTEYRSRWSLAALVATVLKRHLPKPNSLRCGNWERRPLDAAQKRYGALDAYAGLAVWAAL 560
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_015596181.1 (PREDICTED: Werner Syndrome-like exonuclease [Cephus cinctus]) HSP 1 Score: 75.9 bits (185), Expect = 3.400e-10 Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 209 CSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQAL 352 C S + L +LP L+ LL H +R VGVNI +D+ KLGRD+ E ++ ++ AN + S +WSL+ L LQ+++ K +R +W +PL+ E+ AYAA D Y +L ++Q + Sbjct: 118 CLSDKVCHLLYLYDLQKLPAALIVLLKHPKVRLVGVNIKNDVWKLGRDFKEFPAKQVVENNCIDCGPFANSI------------LKRSCRWSLQKLTAYLLQKKISKDPSVRMSKWHIQPLSKEQKAYAATDAYVSLLLHQTI 248
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_011687344.1 (PREDICTED: Werner Syndrome-like exonuclease isoform X1 [Wasmannia auropunctata]) HSP 1 Score: 75.5 bits (184), Expect = 4.500e-10 Identity = 43/143 (30.07%), Postives = 70/143 (48.95%), Query Frame = 0 Query: 209 CSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQAL 352 C + +L +LP + LLCH I+ VGVNI +D+ KLGRD+ E ++ ++ AN + + S +WSLE L L++++ K +R +W +PL++ + YAA D Y +L +Y L Sbjct: 111 CLEDSVCYLLYVYSLKKLPAAFVELLCHSKIKLVGVNIKNDVWKLGRDFKEFPAQKVVENNCLDCGTYANRV------------LNRSCRWSLERLTAYLLKKKINKDPEVRMSKWHVQPLSNAQKNYAATDAYVSLLLYTTL 241
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_011875095.1 (PREDICTED: Werner Syndrome-like exonuclease isoform X1 [Vollenhovia emeryi]) HSP 1 Score: 75.5 bits (184), Expect = 4.500e-10 Identity = 41/143 (28.67%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 209 CSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQAL 352 C + + +L +LP + LLCH ++ VGVNI +D+ KLGRD+ E ++ ++ AN + + S +WSLE L L++++ K ++R W +PL+ + +YAA D Y +L +Y + Sbjct: 147 CLDNSVCYLLYVYSLRKLPAAFVELLCHPKVKLVGVNIKNDVRKLGRDFKEFPAQKVVENNCLDCGPYANQV------------LNRSCRWSLERLTAYLLKKKISKDPKVRMSRWHVQPLSDAQKSYAATDAYVSLLLYTTI 277
BLAST of NO17G02960 vs. NCBI_GenBank
Match: XP_011875096.1 (PREDICTED: Werner Syndrome-like exonuclease isoform X2 [Vollenhovia emeryi]) HSP 1 Score: 75.5 bits (184), Expect = 4.500e-10 Identity = 41/143 (28.67%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 209 CSSSYLVFLXXXXXXXRLPPVLLRLLCHGGIRKVGVNILHDMHKLGRDWGEEIQREGGLRGFVELSDLANHLSFQTSVLPSLAPTSSSGKWSLEHLCIVFLQRQLYKPERIRKGEWEKRPLAHEKMAYAANDVYATLRVYQAL 352 C + + +L +LP + LLCH ++ VGVNI +D+ KLGRD+ E ++ ++ AN + + S +WSLE L L++++ K ++R W +PL+ + +YAA D Y +L +Y + Sbjct: 127 CLDNSVCYLLYVYSLRKLPAAFVELLCHPKVKLVGVNIKNDVRKLGRDFKEFPAQKVVENNCLDCGPYANQV------------LNRSCRWSLERLTAYLLKKKISKDPKVRMSRWHVQPLSDAQKSYAATDAYVSLLLYTTI 257 The following BLAST results are available for this feature:
BLAST of NO17G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02960 ID=NO17G02960|Name=NO17G02960|organism=Nannochloropsis oceanica|type=gene|length=2479bpback to top protein sequence of NO17G02960.1 >NO17G02960.1-protein ID=NO17G02960.1-protein|Name=NO17G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=423bpback to top protein sequence of NO17G02960.2 >NO17G02960.2-protein ID=NO17G02960.2-protein|Name=NO17G02960.2|organism=Nannochloropsis oceanica|type=polypeptide|length=335bpback to top Synonyms
Publications
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