NO17G02950, NO17G02950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02950 vs. NCBI_GenBank
Match: XP_005853963.1 (enzyme of the cupin superfamily [Nannochloropsis gaditana CCMP526] >EKU22397.1 enzyme of the cupin superfamily [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 167.9 bits (424), Expect = 2.400e-38 Identity = 90/148 (60.81%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 8 LFLFLVLITFVAPAATFLLSTAPDSLTCCANSKNFQRQQINTF----ASISSDSSSMSEIKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTFH 152 L L LVL F APAA+FL+ P +T NF ++ T AS + DSS+MS IKVVS+PDEATLT MGV +WP WGC+ S+FPW+YG+AETCYIL+G VTVTP S G+ VTVG GDLVTFP GMSCVW V++AINK Y FH Sbjct: 12 LLLSLVLAGFWAPAASFLVPALPSFVT------NFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCYILEGSVTVTP-SNGQPVTVGAGDLVTFPAGMSCVWKVSKAINKHYKFH 152
BLAST of NO17G02950 vs. NCBI_GenBank
Match: GAX22002.1 (uncharacterized protein FisN_6Hh248 [Fistulifera solaris]) HSP 1 Score: 145.2 bits (365), Expect = 1.700e-31 Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 0 Query: 57 SSSMSEIKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTF 151 S++ EI+VV QPD L + GV SWPTWGC VSKFPW+YG++E+CY+L GRVTVTPT G ++VT GKGD VTFP GMSC WDVTEA+ K Y F Sbjct: 40 STTQQEIEVVYQPDSGFLEKKGVFSWPTWGCGVSKFPWTYGESESCYLLNGRVTVTPTDGRQSVTFGKGDFVTFPSGMSCTWDVTEAVQKHYNF 133
BLAST of NO17G02950 vs. NCBI_GenBank
Match: GAX09378.1 (uncharacterized protein FisN_6Lh248 [Fistulifera solaris]) HSP 1 Score: 142.1 bits (357), Expect = 1.400e-30 Identity = 61/94 (64.89%), Postives = 74/94 (78.72%), Query Frame = 0 Query: 57 SSSMSEIKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTF 151 S++ EI+VV QPD L + GV +WPTWGC VSKFPW+Y ++E+CY+L+GRVTVTPT G K+VT GKGD VTFP GMSC WDVTEA+ K Y F Sbjct: 39 STTQQEIEVVYQPDSDFLEKKGVFTWPTWGCGVSKFPWTYEESESCYVLKGRVTVTPTDGRKSVTFGKGDFVTFPAGMSCTWDVTEAVQKHYNF 132
BLAST of NO17G02950 vs. NCBI_GenBank
Match: XP_005847242.1 (hypothetical protein CHLNCDRAFT_134221 [Chlorella variabilis] >EFN55140.1 hypothetical protein CHLNCDRAFT_134221 [Chlorella variabilis]) HSP 1 Score: 127.5 bits (319), Expect = 3.600e-26 Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 0 Query: 61 SEIKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTFH 152 S IK+ S P EA L +GV SWPTWGC+ S FPWSY ET Y+L+GRV VTP GG+ V V GDLVTFP GMSC WDV EA++K Y FH Sbjct: 6 SGIKLDSSPSEAELKSLGVTSWPTWGCEASNFPWSYSSTETAYVLKGRVIVTP-DGGEPVEVKAGDLVTFPAGMSCTWDVKEAVHKHYKFH 95
BLAST of NO17G02950 vs. NCBI_GenBank
Match: XP_009366892.1 (PREDICTED: uncharacterized protein LOC103956596 [Pyrus x bretschneideri]) HSP 1 Score: 125.9 bits (315), Expect = 1.000e-25 Identity = 55/101 (54.46%), Postives = 73/101 (72.28%), Query Frame = 0 Query: 54 SSDSSSMSE----IKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTF 151 S+D+ SM+ IKV P E+ LT++GV +WP WGC SKFPW+Y + ETCY+LQG+VTVTP ++V +G GDLV FP+GMSC WDV+ A++K Y F Sbjct: 50 SADADSMATQKLGIKVDRNPPESRLTQLGVRNWPKWGCPPSKFPWTYSNKETCYLLQGKVTVTPDGSNESVEIGAGDLVEFPKGMSCTWDVSVAVDKHYNF 150
BLAST of NO17G02950 vs. NCBI_GenBank
Match: XP_008365727.1 (PREDICTED: uncharacterized protein LOC103429347 [Malus domestica]) HSP 1 Score: 125.6 bits (314), Expect = 1.400e-25 Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 37 ANSKNFQRQQINTFASISSDSSSMS----EIKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTF 151 ++S + +R + S+D S++ IKV P E+ LT++GV +WP WGC SKFPW+Y D ETCY+LQG+V VTP ++V +G GDLV FP+GMSC WDV+ A++K Y F Sbjct: 30 SSSSSSRRYSVTPIIRCSADIDSVAIQKLGIKVDRNPPESRLTQLGVRNWPKWGCPPSKFPWTYSDKETCYLLQGKVKVTPDGSNESVEIGAGDLVEFPKGMSCTWDVSVAVDKHYNF 147
BLAST of NO17G02950 vs. NCBI_GenBank
Match: XP_002951954.1 (hypothetical protein VOLCADRAFT_105278 [Volvox carteri f. nagariensis] >EFJ47059.1 hypothetical protein VOLCADRAFT_105278 [Volvox carteri f. nagariensis]) HSP 1 Score: 125.2 bits (313), Expect = 1.800e-25 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 0 Query: 57 SSSMSEIKVV--SQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTFH 152 +S+ + +KVV QP E L GV WPTWGC VSKFPW+Y ++ETCYIL+G+V VTP +GG+AV + GD+ TFP GMSC+WDV INK Y FH Sbjct: 23 ASTQAGMKVVVQRQPSENVLEAKGVRRWPTWGCGVSKFPWTYQESETCYILEGKVVVTP-NGGEAVEINAGDMATFPAGMSCIWDVKAPINKHYNFH 118
BLAST of NO17G02950 vs. NCBI_GenBank
Match: WP_010960001.1 (DUF861 domain-containing protein [Methylococcus capsulatus] >AAU93024.1 conserved hypothetical protein [Methylococcus capsulatus str. Bath]) HSP 1 Score: 125.2 bits (313), Expect = 1.800e-25 Identity = 54/91 (59.34%), Postives = 64/91 (70.33%), Query Frame = 0 Query: 60 MSEIKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTF 151 M IK+ + P E L +GV WPTW C VS FPW+Y ++ETCYIL+G VTVTP GG+ V +GKGDLVTFP GMSC WDV + K YTF Sbjct: 1 MPSIKIENNPPETRLGELGVRRWPTWSCGVSSFPWTYDESETCYILEGEVTVTP-QGGEPVRIGKGDLVTFPPGMSCTWDVHVPVKKHYTF 90
BLAST of NO17G02950 vs. NCBI_GenBank
Match: KXZ41886.1 (hypothetical protein GPECTOR_252g633 [Gonium pectorale]) HSP 1 Score: 124.4 bits (311), Expect = 3.000e-25 Identity = 57/105 (54.29%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 47 INTFASISSDSSSMSEIKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTFH 152 I+ + + + + +I V QP E L GV SWPTWGC VSKFPW+Y + ETC+IL+GRV VTP +GG+ V V GDL TFP GMSC WDV INK Y FH Sbjct: 12 ISARLQVQASAKAAQKIFVQRQPGEDVLKAKGVRSWPTWGCGVSKFPWTYQEPETCFILEGRVVVTP-NGGEPVEVAAGDLATFPAGMSCTWDVKAPINKHYNFH 115
BLAST of NO17G02950 vs. NCBI_GenBank
Match: XP_022156029.1 (uncharacterized protein LOC111023000 [Momordica charantia]) HSP 1 Score: 124.0 bits (310), Expect = 3.900e-25 Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 0 Query: 63 IKVVSQPDEATLTRMGVNSWPTWGCDVSKFPWSYGDAETCYILQGRVTVTPTSGGKAVTVGKGDLVTFPEGMSCVWDVTEAINKRYTF 151 IK+ P E+ LT++GV WP WGC+ SKFPW+Y D ETC++L+G+V VTP ++V +G GDLV FP+GMSC WDV+ A++K Y F Sbjct: 50 IKIEKNPPESKLTQLGVRQWPKWGCEPSKFPWTYSDKETCFLLEGKVKVTPAGSEESVEIGSGDLVVFPKGMSCTWDVSVAVDKHYNF 137 The following BLAST results are available for this feature:
BLAST of NO17G02950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02950 ID=NO17G02950|Name=NO17G02950|organism=Nannochloropsis oceanica|type=gene|length=1192bpback to top protein sequence of NO17G02950.1 >NO17G02950.1-protein ID=NO17G02950.1-protein|Name=NO17G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=152bpback to top Synonyms
Publications
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