NO17G02910, NO17G02910 (gene) Nannochloropsis oceanica

Overview
NameNO17G02910
Unique NameNO17G02910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4479
Alignment locationchr17:847829..852307 -

Link to JBrowse

Properties
Property NameValue
DescriptionTVP38/TMEM64 family membrane protein slr0305
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:847829..852307 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR015414Tvp38/TMEM64-like
IPR032816SNARE_assoc
Homology
BLAST of NO17G02910 vs. NCBI_GenBank
Match: EWM24111.1 (hypothetical protein Naga_100660g1 [Nannochloropsis gaditana])

HSP 1 Score: 287.0 bits (733), Expect = 1.300e-73
Identity = 152/221 (68.78%), Postives = 183/221 (82.81%), Query Frame = 0
Query:   14 STSALPPLPVPLLFLPSSSSPSTSRHRRPPCFQMKLRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLARTYFREQV 235
            S+  LP  P  LLF+P     ++   R P   +MK+RDSP Q H QWKE+E+ELWKARRGISR+ LKPV ML+RR+D++ +AR+AKG DPTGGKKEEVKNAVVATALL+AVVTAVARLGGRAAVMSMMGLDIL D G++ +L SV++ VEG+G+ E+L++FF LWVVAK++CLD LALVLGLSSG+LFGGVW+GAL STVCAT AS +GF LARTY REQV
Sbjct:   14 SSYCLPLPPPSLLFVPPPVMRTSVPSRFPRPLKMKMRDSPRQKHAQWKEDEMELWKARRGISRSFLKPVGMLTRRRDRLTRARMAKGLDPTGGKKEEVKNAVVATALLVAVVTAVARLGGRAAVMSMMGLDILADAGVTGKLTSVLDMVEGMGKAERLLIFFSLWVVAKNLCLDGLALVLGLSSGILFGGVWEGALSSTVCATGASFIGFMLARTYLREQV 234          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: EWM24113.1 (hypothetical protein Naga_101247g1 [Nannochloropsis gaditana])

HSP 1 Score: 267.3 bits (682), Expect = 1.100e-67
Identity = 149/278 (53.60%), Postives = 176/278 (63.31%), Query Frame = 0
Query:  283 SSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREAMMMMPVLEGEEEAEWDWWTMLGITRPKGGVWVEEWKRLETAVQDEWKQTIRQLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILAVVPPNTPEGTLHRTTLASQAVGIVLFPFVLLGSATGRLGDALSSSPSSFASYSPVGAREGGKEGEEEKEGMEVPPPSVQ 561
            SS+S  DFL GIFAGSLKPYFLDAYLGVWGKDLLS +E    AG EG    D AQ  +L G FF+LVLVG L+ QIAGRAFDEAK+EA+M +P+ EGE EA+WDWWTM+G+ RPKG VW EEW RLETAV+DEWK+ +  LA                                                      ILAVVPPNTPEGT+HRT++ASQ VGI+LFPFVLLG ATGRL +ALSSSPS  ++     A       EE +EG+++PPPS+Q
Sbjct:   85 SSVSIFDFLVGIFAGSLKPYFLDAYLGVWGKDLLSVNE----AGGEGGGGVDIAQTVILSGTFFLLVLVGALAGQIAGRAFDEAKQEALMTVPLKEGETEAQWDWWTMMGVERPKGNVWTEEWGRLETAVEDEWKKLMEDLA---------AQEEETGERQRDRISPHPASYTTRRGGKEGKGREEQEIPGGKDEDILAVVPPNTPEGTVHRTSVASQLVGILLFPFVLLGGATGRLSEALSSSPSRLSTL----AASSAPSEEEGEEGVDIPPPSLQ 345          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: CBJ33087.1 (Hypothetical UPF0043 protein slr0305 [Ectocarpus siliculosus])

HSP 1 Score: 241.1 bits (614), Expect = 8.200e-60
Identity = 161/412 (39.08%), Postives = 228/412 (55.34%), Query Frame = 0
Query:   35 STSRHR-----RPPCFQMKLRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLARTYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREAMMMMPVLEGEEEAE----------------WDWWTMLGITRPKGGVWVEEWKRLETAVQDEWKQTIRQLAE 426
            ST  HR     RP     +  + P +      +  +E+W +RR ++R  L     L   ++ I    +A     T    E+ K ++V +A+ LAV  A  RLGGRAA++S +GLD  +DTGI   + S +   +GLG   +   F   WVVAK+ C+D L++VL L SGV+FGGV QGAL+ST CAT AS +GFQLART  R QV  QL KRP LRALE+ V+++G K V T RL+P++P +P+G YNY+YG +S+    FL+G+  GSLKPY LD+YLGV+GK ++   +G +G G + A          L G FFV+VLVGT ++Q+A R ++E   EA   MP                          +W  + GI R     W   WK  + AV+ + +  ++Q  E
Sbjct:   37 STPHHRPIAPHRPNMNMNQPAEVPEKLRQANLKAHIEVWDSRRDMTRATLSAAKALRGARESIAGEDVA-----TDSLVEDGKGSLVISAIALAVAAATLRLGGRAALVSALGLDFGEDTGIKENVESFLAFFDGLGP-VRYAYFLGGWVVAKTFCVDFLSIVLALGSGVVFGGVLQGALVSTACATIASGLGFQLARTTLRTQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLP-IPLGAYNYVYGTTSLPLPVFLSGMAVGSLKPYLLDSYLGVFGKQMV---DGEAGVGGDLA----------LVGTFFVVVLVGTFASQVASRTWEELNAEAEKSMPTAAETNTPPGGVPXXXXXXXXXXDGLEWLDLWGIERSSLPDWFTTWKAKDNAVRSKIRGVVKQERE 428          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: XP_002293883.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88892.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 199.5 bits (506), Expect = 2.700e-47
Identity = 142/390 (36.41%), Postives = 214/390 (54.87%), Query Frame = 0
Query:   61 KEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGK--KEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDI-LQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAF----DEAKRE-AMMMMPVLEGEEEAEWDWWTMLGITRPKGGVWVEEW------------KRLETAVQDE-----WKQTIRQL 424
            +E  +++   RR   R +LK        K+  +Q       DP  GK    + K+AV  TA ++A      R+GGRAA++S +GLD   ++  +   LNSV++  + +G   +L +F   W   K  C DA  +VL L+SG+LFGGVWQGA++S   AT  S + F +A+  T  R++ L  +++ P LR +E+ VAKDG+KA+ T RL+P++P +P+G YNY+YGV+++  +DF  GIF GSLKPY LD+YLGV+GK ++  + G          E  + Q ALL  A  V VL+G  ++Q+A   +    +E +RE A       EG E  ++D     GITR   G+ V +W            KR+ T ++DE     W  T  +L
Sbjct:   14 EESRMKVLTDRRKSIRGILKAA---ESSKNFRLQNGYVPELDPDTGKPISSDSKSAVAITAFVVAAGAVALRIGGRAALVSALGLDFATENPELREGLNSVLQYADTVGTETELALFILAWTAVKVFCFDAGGVVLALASGILFGGVWQGAVVSAFAATVGSSIAFGMAKLDTPVRKKALEVVDEYPSLRGIEKVVAKDGLKAILTLRLAPVLP-IPLGIYNYVYGVTNVPYLDFAGGIFLGSLKPYLLDSYLGVFGKQIVDGTAG----------EVGSLQDALLLVALGVSVLIGVFASQLANETWESINEEVEREKAEKAAAEGEGGEIDDYD-----GITREFMGMDVPKWIIGFQLALQAADKRVNTMIEDEYHAKVWNYTAEEL 384          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: GAX17868.1 (hypothetical protein FisN_18Hh072 [Fistulifera solaris])

HSP 1 Score: 198.7 bits (504), Expect = 4.600e-47
Identity = 138/349 (39.54%), Postives = 198/349 (56.73%), Query Frame = 0
Query:   30 SSSSPSTSRHRRPPCFQMKLRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAK-GKDPTGG-----KKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDT-GISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKRE 370
            S+ S S +R R      + L  SPH +  +  E  L++   RR   R VLK         D + ++RIA   +D  G      K+E+ K A+  TA L+A      R+GGRAA++S +GLD + ++  +  QL S+++T E +    KL++F   W   K +CLDA  +VL LSSG+LFGGV QGA++S   AT  S V F LA+  T  R++ L  L + P LR +E+ VAKDG+KAV T RL+P++P +P+G YNY+YGV+++    F  GIF GSLKPY LD+YLG +GK ++  S      GM         Q  LL  A  V VL+G  ++Q+A   +D   +E
Sbjct:   23 STRSSSIARTR------VVLNQSPHDDDEE--EARLQILTTRRKQIRAVLKSA-------DALRESRIAALPRDADGNVLYTKKEEDTKTALTFTAFLVAAGAVALRVGGRAALVSAVGLDFMTESPELQQQLESILKTAETMDYTTKLLLFTAAWTAVKCLCLDAGGIVLALSSGILFGGVLQGAILSAAAATVGSSVAFGLAKLNTPVRQKALQLLEEYPSLRGIEKVVAKDGLKAVLTLRLAPILP-IPLGLYNYVYGVTNVGWGPFCGGIFLGSLKPYLLDSYLGYFGKSIVDGSIQQDAGGM---------QDTLLLVALGVSVLIGVFASQLASETWDAVLQE 346          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: XP_002186400.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >ACI65870.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 190.3 bits (482), Expect = 1.700e-44
Identity = 121/320 (37.81%), Postives = 185/320 (57.81%), Query Frame = 0
Query:   56 NHNQWKEEE---LELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLD-ILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKRE 370
            N ++  +EE   L++WK+RR   R  LK    +  R  ++ Q  + +  D     K + K A+  TA ++A      R+GGRAA++S +GLD + ++  + + L+ V+ T + +    KL++F   W   K +C DA  + L LSSG+LFGGV QGA++S   AT  S V F LA+  T  R++ L  L++ P LR +E+ VAK+G KA+ T RL+PL+P +PIG YNY+Y ++++  +DF  GIF GSLKPY LD+YLG +GK L           ++G A+ +  Q  LL  A    VL+G  ++Q+A   +D    E
Sbjct:  228 NQDELMKEESVRLQVWKSRRNQIRQTLKSADQV--RIFRLQQGWVPELGDDGKPLKSDGKVALTLTAFVIAAGAIALRIGGRAALVSTLGLDFVTENPELKANLDIVLNTADNMDPVTKLLLFTASWTAVKVLCFDAAGVALALSSGILFGGVLQGAVVSAAAATFGSTVAFGLAKLDTPLRKKGLGLLDEYPSLRGIEKVVAKEGFKAILTLRLAPLLP-IPIGAYNYIYSITNVPLLDFCGGIFIGSLKPYLLDSYLGYFGKSL-----------VDGTADQNGWQDTLLLAALGFSVLIGVFASQLASETWDSVLEE 533          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: KOO24394.1 (hypothetical protein Ctob_008225 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 188.3 bits (477), Expect = 6.300e-44
Identity = 121/316 (38.29%), Postives = 177/316 (56.01%), Query Frame = 0
Query:   60 WKEE-----ELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLARTYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREA 371
            WKE+       E+W++R   +R   + +        +  + R A+ ++         K+A VA+A  + +   + R GGRAA++S +GLDI+ D GI  Q++ V+   E  G G  +V F   W++AK   +D +A+ L  SSG+LFGGV +GALIS V AT  SL+   L+R   +E+V   + KRP+ R L + V  DG K VF  RLSP++P +P G Y Y+YG S +S + F AG F GSLKPY LDAYLGV  K +L           +GA+  D+    LL G    LVLVG  + ++A  ++D A+ +A
Sbjct:   53 WKEQMKETAAQEVWQSREEFARGSFRALISFKEDARETAEKRAARRQEGKXXXXXXTKSAFVASAAAVLLGATLLRFGGRAALVSALGLDIVADLGIGDQIDQVLLYAEQAG-GWTVVAFIGAWMIAKVFLIDVIAIALAFSSGILFGGVLEGALISAVGATLGSLIALSLSRGLLQERVAGFIQKRPVARGLAKVVEADGFKTVFVLRLSPVLP-IPTGSYPYIYGTSKLSPLTFAAGYFLGSLKPYLLDAYLGVLSKQIL-----------DGASLDDSKDVLLLVG-LGALVLVGVFATELANESWDLAEVKA 354          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: EJK45668.1 (hypothetical protein THAOC_35698 [Thalassiosira oceanica])

HSP 1 Score: 182.2 bits (461), Expect = 4.500e-42
Identity = 137/394 (34.77%), Postives = 210/394 (53.30%), Query Frame = 0
Query:   49 LRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGK--KEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDIL-QDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREA-MMMMPVLEGEEEAEWDWWT-MLGITRPKGGVWVEEW-----KRLETAVQDE-----WKQTIRQLAE 426
            L  +P +     +E  L+++  RR   R VLK        K+  +   +    DP  GK  K + K+AV  TA ++A    + RLGGRAA++S +GLD   ++  +   L SV+     +G   +L +F   W V K  C DA  +VL L+SG+LFGGV QGA++S   AT  S   F LA+  T  R++ L  + + P LR +E+ VAKDG+KA+ T RL+P++P +PIG YNY+YGV+++  + F  GIF GSLKPY LD+YLGV+GK +           ++G  +    Q  LL  A  V VL+G  ++Q+A   +D    E       + E E++ E    T  +G+  P+  V  ++      +R+   +++E     W  T+ +L E
Sbjct:   64 LASTPEEEERLVEEARLKVFSDRRRTIRWVLKNA---ESTKNYRIANDLVPELDPETGKPIKSDGKSAVTITAFVVAGGAVLLRLGGRAALVSALGLDFASENPELKDGLESVLGYANTMGTESELFLFILAWTVVKVFCFDAGGVVLALASGILFGGVIQGAVVSAFAATVGSSAAFGLAKIDTPVRKKALDLVEEYPSLRGIEKVVAKDGLKAILTLRLAPVLP-IPIGLYNYVYGVTNVPYLQFAGGIFLGSLKPYLLDSYLGVFGKQI-----------VDGTTQDGGLQDFLLLVALGVSVLIGVFASQLAEETWDSINEEVEAKKAEISESEDDEEGGVMTEFMGVGLPQFIVKFQQALQAADERVNKLIEEEMEAKVWNCTMAELEE 442          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: OEU21825.1 (hypothetical protein FRACYDRAFT_258815 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 177.6 bits (449), Expect = 1.100e-40
Identity = 106/237 (44.73%), Postives = 149/237 (62.87%), Query Frame = 0
Query:  131 LGGRAAVMSMMGLDILQDT-GISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFD 365
            +GGRAA++S +GLD +QD   + +Q+N V+E  E +    K  +F   W + K+ C DA  +VL  SSG+LFGGV QGA++S + AT  S V F LA+  T  R++ L  + + P LR LE+ VA +G+KAV T RL+P++P +P+G YNY+YGVS+I   +F  GIF GSLKPYFLD+YLG +GK L+  S     A   GA    T Q  +L G     VL+G  ++Q+A   +D
Sbjct:    9 MGGRAALVSAVGLDFIQDNPDMQNQINQVLEYTETMDPILKSGLFIFGWTLTKTFCFDAAGIVLAFSSGILFGGVLQGAVMSALGATIGSSVAFALAKADTPIRKKALEVVEENPSLRGLEKVVADEGLKAVLTLRLAPILP-IPLGMYNYVYGVSNIRYWEFAGGIFLGSLKPYFLDSYLGYFGKSLVDGSAAAQAAENGGAG---TLQDYVLIGVLGFSVLIGVFASQLAAETWD 241          
BLAST of NO17G02910 vs. NCBI_GenBank
Match: GAX24518.1 (hypothetical protein FisN_18Lh072 [Fistulifera solaris])

HSP 1 Score: 177.2 bits (448), Expect = 1.400e-40
Identity = 126/326 (38.65%), Postives = 182/326 (55.83%), Query Frame = 0
Query:   54 HQNHNQWKEEE---LELWKARRGISRTVLKPVAMLSRRKDKIMQ-ARIAKGK---DPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDT-GISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKRE 370
            HQ  +  +EEE   L++  ARR   R VLK    L  R+ +I    R A G    D +   ++  K A+  TA ++A      R+GGRAA++S +GLD + D+  +  QL S+++T E +    KL++F   W   K +CLDA  +VL LSSG+LFG            AT  S V F LA+  T  R++ L  L++ P LR +E+ VAKDG+KA+ T RL+P++P +P+G YNY+YGV+++    F  GIF GSLKPY LD+YLG +GK ++  S      GM         Q  LL  A  V VL+G  ++Q+A   +D   +E
Sbjct:   41 HQTPHDEEEEETARLQILTARRKQIRAVLKSAETL--RESRIASLPRDANGNFLLDASSKGEDINKTALTLTAFVIAAGAVALRVGGRAALVSAVGLDFMTDSPELQQQLESILQTAETMNPITKLLLFTAAWTAVKCLCLDAGGIVLALSSGILFGXXXXXXXXXXXXATVGSSVAFGLAKMDTPIRQKALQVLDEYPSLRGIEKVVAKDGLKAILTLRLAPVLP-IPLGLYNYVYGVTNVGWGPFCGGIFLGSLKPYLLDSYLGYFGKSIVDGSIQQDTGGM---------QDTLLLVALGVSVLIGVFASQLASETWDAVLQE 354          
The following BLAST results are available for this feature:
BLAST of NO17G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24111.11.300e-7368.78hypothetical protein Naga_100660g1 [Nannochloropsi... [more]
EWM24113.11.100e-6753.60hypothetical protein Naga_101247g1 [Nannochloropsi... [more]
CBJ33087.18.200e-6039.08Hypothetical UPF0043 protein slr0305 [Ectocarpus s... [more]
XP_002293883.12.700e-4736.41predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX17868.14.600e-4739.54hypothetical protein FisN_18Hh072 [Fistulifera sol... [more]
XP_002186400.11.700e-4437.81predicted protein, partial [Phaeodactylum tricornu... [more]
KOO24394.16.300e-4438.29hypothetical protein Ctob_008225 [Chrysochromulina... [more]
EJK45668.14.500e-4234.77hypothetical protein THAOC_35698 [Thalassiosira oc... [more]
OEU21825.11.100e-4044.73hypothetical protein FRACYDRAFT_258815 [Fragilario... [more]
GAX24518.11.400e-4038.65hypothetical protein FisN_18Lh072 [Fistulifera sol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008449NSK008449Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02910.1NO17G02910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101247g1gene6355Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02910.1NO17G02910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02910 ID=NO17G02910|Name=NO17G02910|organism=Nannochloropsis oceanica|type=gene|length=4479bp
TCCCCATCGCGTTTATGCACTCGGGTAGAGCAGGGGCAGGTCTCTTAATA
AATGGAAGAGGTTTCGTCCATGTCCATCCCCTGATTTTCCTCTTTCCTCC
ATTTCCTCCTTTGTCCATATCGCAGCCTGGCCGAGGTGAACTTCGCGAGG
AGAAGTTGCACCAGCAGCAGAGGGAACGAATCCAACCGACATCAACCTCA
TGCCCCCTCTCCTCGACGTCTCAATACACGCAAGCATACACACTCTTACA
CATACATAAATACACACAGATACCAGGCGCCCACGACACGAGCGATGAGT
CTACCACATTCAGCCCTTGAACCGTTGGCTTTCTCCACCAGTGCCCTTCC
ACCACTCCCTGTCCCTCTCCTCTTCCTCCCCTCCTCGTCCTCTCCCTCCA
CGTCCCGGCACCGCCGCCCTCCTTGCTTTCAGATGAAGCTCCGCGACTCC
CCCCACCAAAATCACAACCAATGGAAGGAGGAAGAGCTCGAGCTGTGGAA
AGCACGGAGAGGGATTTCACGAACTGTGCTCAAGCCCGTGGCCATGTTGT
CGAGACGGAAGGACAAAATCATGCAGGCCCGGATAGgtacgtttcgagga
aggaagggagggagggaaggacgaagaaagggcgggagagcaagaaggaa
gactgttgtgtggtggtacaaatgagaagagttagacttttttgggacac
aacgaagtcgctcctcccccccctcacacattcatcctccctccctccct
ccctccctccctcttcacgttagCTAAAGGTAAAGACCCCACAGGCGGGA
AGAAGGAGGAGGTCAAAAATGCCGTGGTCGCTACAGCTCTCCTTCTCGCC
GTCGTGACAGCTGTGGCGCGgtaagcaaggagggaaggagggagggaggg
aaggaaggaaggcaagatagggcatcagattcgactccatcttccctcct
cccctcctttcctccctccccctcctccttcatcagGCTGGGCGGTCGTG
CGGCCGTGATGAGTATGATGGGATTGGACATCTTGCAGGACACGGGCATT
TCCTCGCAGCTGAACAGCGTGATGGAGACGGTGGAGGGGCTGGGAGAGGG
GGAGAAGCTGGTGGTCTTCTTTTGTCTGTGGGTGGTGGCGAAAAGCGTAT
GCCTGGATGCTCTGGCGCTGgtgagggagaaagggagggagggagggagg
gagggagggagagagggttcatttgtgttgaacttgggcccggtactcat
ttccccccccgctccttcccccctccctccctccctccctccctccctcc
ctccctcccttcctccctccctccctccctcaacacaaatgaacgggcat
ccctcctgtcccccctccctccctccctccctccctccctccctcagGTC
CTGGGTCTATCAAGCGGCGTCCTATTTGGGGGCGTGTGGCAAGGGGCACT
TATTTCCACCGTGTGTGCCACGGCCGCGTCTCTGGTGGGCTTCCAGCTTG
CCAGAACGTACTTTAGAGAGCAGgtagggggggagagagggagagtgtga
gagtgagcaggagcaggagggacgagaaggagaatgcagccacctttcac
aagactcccacactcagtcacccacccgccgcctttccttccctccctcc
ctccctccctccctccctccctcgcagGTCCTGACGCAGCTTAACAAACG
CCCGCTTCTTCGCGCCCTCGAGCGGGCGGTGGCCAAGGATGGGATCAAGG
CCGTCTTCACCTTCCGCCTCTCCCCCCTCGTGCCCGCCCTTCCCATCGGC
GGCTACAACTACCTTTATGGCGTTTCCAGgtgcgagcccctccctccctc
cctccctccctccctctcgtcttatacttaccttcaggctctcctttcct
cccctcctccctttctccctctcgtcttgtacttaccttcaggctctcct
ttcctccctccctccctccctccctctcgtcttgtacttaccttcaggct
ctcctttcctccctccctccctccctccctctcgtcttatacttaccttc
aggctctcctttcctcccctcctccctttctccctctcgtcttatactta
ccttcaggctctcctttcctcccttcctccctcctcactccctccctccc
tccctccctcccttccctccctccctccctcccacagCATCTCCACCGTC
GATTTTTTGGCCGGCATCTTCGCGGGCAGTCTCAAGCCCTACTTTTTAGg
tgagaagggagggaaggagggagggagagagggagcgaaggagggaggga
gggagggagggacagacatgagtgtacaagcagaatatgaaaacgttgcg
tgatcaaaccctctaggcaaagtctgacaccccccctccctccctccctc
cctccctccctccctccctccctccctccctccctcccttaagACGCCTA
CCTGGGCGTGTGGGGCAAGGACCTGCTCTCTTCCAGCGAGGGCGGGAGCG
GGGCAGGGATGGAAGGAGCGGCAGAAGCAGACACAGCGCAGGCCGCGCTG
CTCTTCGGTGCGTTTTTTGTCCTGGTCCTGGTCGGGACGTTGTCGGCGCA
Ggtagggagggagggagggaggaagggagggagggagggagggagggtgg
tttttgaccccacttacatttctattgacgcgcatttctccctccctcct
tccctccctccctccctccctctgtcccagATCGCGGGCCGGGCCTTCGA
CGAGGCCAAGCGGGAGGCGATGATGATGATGCCCGTGCTGGAGGGAGAGG
AGGAGgtatgtccttcccgctctccctctctccttccctccctcccttcc
ttcctccctccctccctctccctccctccctcccttcctccctccgtccc
acgggccttttatgactttccccccaccttcatgccgccgagacattctc
ctattgttttttatttgcttttcagtttctcaccgccgtggccaccctct
ctccccccctccctccttccatccctccctcaagGCGGAGTGGGACTGGT
GGACTATGCTGGGAATAACGCGGCCGAAGGGAGGGGTGTGGGTGGAGGAG
TGGAAGCGGCTGGAGACGGCCGTGCAGgtagggagggagggagggagggg
aaaagggagggagggagggagggagggagggagggagggagggtgtgtgg
atggaggaatggaagcggctggagagatggccgtgtaggtagggatgggg
ggagggagggagggaaggaaggtgggggtgagggtggaggaatgggagcg
gctggagatggccgtataggtagggagggagggagggagggaaggaagga
gggcaatcctcattggatttctccagcagcagtattgcatccatccaact
gtcttcccccccgatcccttctggtccttctctcttgccctccctccctc
cctccctccctccctcttagGACGAGTGGAAACAAACCATTCGGCAGCTG
GCTGAGACAGAGGAGGAGAAGGAGCGGCAGACGCATGGCGGCAGCGGTCC
AGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGATGACACCTCTGCCC
CCTGGGCTGCGGCCATGTCCGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGACGACATTCTGGCGGTTGTTCCTCCCAACACTCCGGAGGG
CACCCTGCACAGAACTACGCTAGCCTCACAGgtagggagggagggaggaa
cggagggagggaggggcgtgaaagaggacccattgcttcttctccgcaca
cgaagaagcaatttatgtagtctcaccctctcctcacccctccctccctc
cctccctccctccctccttggcagGCTGTGGGCATCGTCCTCTTCCCCTT
CGTCTTGCTGGGGAGCGCCACCGGCAGGCTGGGTGACGCCCTCTCCTCCT
CCCCTTCCTCCTTCGCTTCCTATTCTCCTGTGGGAGCGAGGGAGGGAGGG
AAGGAGGGTGAGGAGGAGAAGGAAGGAATGGAGGTACCACCCCCATCTGT
GCAGTAGGAGGGAGGAGGGGGGGGACGGAGGAGGGGAGGGAAGGAGGGAA
CGAGGACTGTAACCATAAGAGTGGTAGGGATCCTTAGTGGCAGCTGGAGC
AGCAGCAGCGGCAGCAGTAGGAACAGTAAATAGGAAGGGGAGGAAGGAGA
GGGAGAAGAAGGAGGAGGAGGCGAAAGACTAGAAGAACGACAATAGTGAA
ACGTTGTGAGAGGTGGGAGGGAGGGAGGGGGGAGGGGGGAGGTCGGTCGG
AGCCGACCGTGAATAGGAGAAGAGAAGAGGGAGGAACAAGCACGATGAGT
ACAGAGGCAGTAGGAGCGGAGGCATCGCACCAGGTGGTCGCAGCGTCGGC
AGCAGTAATGCGGGGAAAGCATTAAAAAGCAACTAGAGTCACGGCCACAG
ATAAAACAAAACCAACCGAGAAACACCCA
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protein sequence of NO17G02910.1

>NO17G02910.1-protein ID=NO17G02910.1-protein|Name=NO17G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=561bp
MSLPHSALEPLAFSTSALPPLPVPLLFLPSSSSPSTSRHRRPPCFQMKLR
DSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKG
KDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDTG
ISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVL
FGGVWQGALISTVCATAASLVGFQLARTYFREQVLTQLNKRPLLRALERA
VAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLK
PYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVL
VGTLSAQIAGRAFDEAKREAMMMMPVLEGEEEAEWDWWTMLGITRPKGGV
WVEEWKRLETAVQDEWKQTIRQLAETEEEKERQTHGGSGPAAAAAAAAAA
ADDTSAPWAAAMSEGGREGGREGGREDDILAVVPPNTPEGTLHRTTLASQ
AVGIVLFPFVLLGSATGRLGDALSSSPSSFASYSPVGAREGGKEGEEEKE
GMEVPPPSVQ*
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