NO17G02910, NO17G02910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02910 vs. NCBI_GenBank
Match: EWM24111.1 (hypothetical protein Naga_100660g1 [Nannochloropsis gaditana]) HSP 1 Score: 287.0 bits (733), Expect = 1.300e-73 Identity = 152/221 (68.78%), Postives = 183/221 (82.81%), Query Frame = 0 Query: 14 STSALPPLPVPLLFLPSSSSPSTSRHRRPPCFQMKLRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLARTYFREQV 235 S+ LP P LLF+P ++ R P +MK+RDSP Q H QWKE+E+ELWKARRGISR+ LKPV ML+RR+D++ +AR+AKG DPTGGKKEEVKNAVVATALL+AVVTAVARLGGRAAVMSMMGLDIL D G++ +L SV++ VEG+G+ E+L++FF LWVVAK++CLD LALVLGLSSG+LFGGVW+GAL STVCAT AS +GF LARTY REQV Sbjct: 14 SSYCLPLPPPSLLFVPPPVMRTSVPSRFPRPLKMKMRDSPRQKHAQWKEDEMELWKARRGISRSFLKPVGMLTRRRDRLTRARMAKGLDPTGGKKEEVKNAVVATALLVAVVTAVARLGGRAAVMSMMGLDILADAGVTGKLTSVLDMVEGMGKAERLLIFFSLWVVAKNLCLDGLALVLGLSSGILFGGVWEGALSSTVCATGASFIGFMLARTYLREQV 234
BLAST of NO17G02910 vs. NCBI_GenBank
Match: EWM24113.1 (hypothetical protein Naga_101247g1 [Nannochloropsis gaditana]) HSP 1 Score: 267.3 bits (682), Expect = 1.100e-67 Identity = 149/278 (53.60%), Postives = 176/278 (63.31%), Query Frame = 0 Query: 283 SSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREAMMMMPVLEGEEEAEWDWWTMLGITRPKGGVWVEEWKRLETAVQDEWKQTIRQLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILAVVPPNTPEGTLHRTTLASQAVGIVLFPFVLLGSATGRLGDALSSSPSSFASYSPVGAREGGKEGEEEKEGMEVPPPSVQ 561 SS+S DFL GIFAGSLKPYFLDAYLGVWGKDLLS +E AG EG D AQ +L G FF+LVLVG L+ QIAGRAFDEAK+EA+M +P+ EGE EA+WDWWTM+G+ RPKG VW EEW RLETAV+DEWK+ + LA ILAVVPPNTPEGT+HRT++ASQ VGI+LFPFVLLG ATGRL +ALSSSPS ++ A EE +EG+++PPPS+Q Sbjct: 85 SSVSIFDFLVGIFAGSLKPYFLDAYLGVWGKDLLSVNE----AGGEGGGGVDIAQTVILSGTFFLLVLVGALAGQIAGRAFDEAKQEALMTVPLKEGETEAQWDWWTMMGVERPKGNVWTEEWGRLETAVEDEWKKLMEDLA---------AQEEETGERQRDRISPHPASYTTRRGGKEGKGREEQEIPGGKDEDILAVVPPNTPEGTVHRTSVASQLVGILLFPFVLLGGATGRLSEALSSSPSRLSTL----AASSAPSEEEGEEGVDIPPPSLQ 345
BLAST of NO17G02910 vs. NCBI_GenBank
Match: CBJ33087.1 (Hypothetical UPF0043 protein slr0305 [Ectocarpus siliculosus]) HSP 1 Score: 241.1 bits (614), Expect = 8.200e-60 Identity = 161/412 (39.08%), Postives = 228/412 (55.34%), Query Frame = 0 Query: 35 STSRHR-----RPPCFQMKLRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLARTYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREAMMMMPVLEGEEEAE----------------WDWWTMLGITRPKGGVWVEEWKRLETAVQDEWKQTIRQLAE 426 ST HR RP + + P + + +E+W +RR ++R L L ++ I +A T E+ K ++V +A+ LAV A RLGGRAA++S +GLD +DTGI + S + +GLG + F WVVAK+ C+D L++VL L SGV+FGGV QGAL+ST CAT AS +GFQLART R QV QL KRP LRALE+ V+++G K V T RL+P++P +P+G YNY+YG +S+ FL+G+ GSLKPY LD+YLGV+GK ++ +G +G G + A L G FFV+VLVGT ++Q+A R ++E EA MP +W + GI R W WK + AV+ + + ++Q E Sbjct: 37 STPHHRPIAPHRPNMNMNQPAEVPEKLRQANLKAHIEVWDSRRDMTRATLSAAKALRGARESIAGEDVA-----TDSLVEDGKGSLVISAIALAVAAATLRLGGRAALVSALGLDFGEDTGIKENVESFLAFFDGLGP-VRYAYFLGGWVVAKTFCVDFLSIVLALGSGVVFGGVLQGALVSTACATIASGLGFQLARTTLRTQVEEQLEKRPALRALEKVVSEEGFKTVVTLRLAPVLP-IPLGAYNYVYGTTSLPLPVFLSGMAVGSLKPYLLDSYLGVFGKQMV---DGEAGVGGDLA----------LVGTFFVVVLVGTFASQVASRTWEELNAEAEKSMPTAAETNTPPGGVPXXXXXXXXXXDGLEWLDLWGIERSSLPDWFTTWKAKDNAVRSKIRGVVKQERE 428
BLAST of NO17G02910 vs. NCBI_GenBank
Match: XP_002293883.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88892.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 199.5 bits (506), Expect = 2.700e-47 Identity = 142/390 (36.41%), Postives = 214/390 (54.87%), Query Frame = 0 Query: 61 KEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGK--KEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDI-LQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAF----DEAKRE-AMMMMPVLEGEEEAEWDWWTMLGITRPKGGVWVEEW------------KRLETAVQDE-----WKQTIRQL 424 +E +++ RR R +LK K+ +Q DP GK + K+AV TA ++A R+GGRAA++S +GLD ++ + LNSV++ + +G +L +F W K C DA +VL L+SG+LFGGVWQGA++S AT S + F +A+ T R++ L +++ P LR +E+ VAKDG+KA+ T RL+P++P +P+G YNY+YGV+++ +DF GIF GSLKPY LD+YLGV+GK ++ + G E + Q ALL A V VL+G ++Q+A + +E +RE A EG E ++D GITR G+ V +W KR+ T ++DE W T +L Sbjct: 14 EESRMKVLTDRRKSIRGILKAA---ESSKNFRLQNGYVPELDPDTGKPISSDSKSAVAITAFVVAAGAVALRIGGRAALVSALGLDFATENPELREGLNSVLQYADTVGTETELALFILAWTAVKVFCFDAGGVVLALASGILFGGVWQGAVVSAFAATVGSSIAFGMAKLDTPVRKKALEVVDEYPSLRGIEKVVAKDGLKAILTLRLAPVLP-IPLGIYNYVYGVTNVPYLDFAGGIFLGSLKPYLLDSYLGVFGKQIVDGTAG----------EVGSLQDALLLVALGVSVLIGVFASQLANETWESINEEVEREKAEKAAAEGEGGEIDDYD-----GITREFMGMDVPKWIIGFQLALQAADKRVNTMIEDEYHAKVWNYTAEEL 384
BLAST of NO17G02910 vs. NCBI_GenBank
Match: GAX17868.1 (hypothetical protein FisN_18Hh072 [Fistulifera solaris]) HSP 1 Score: 198.7 bits (504), Expect = 4.600e-47 Identity = 138/349 (39.54%), Postives = 198/349 (56.73%), Query Frame = 0 Query: 30 SSSSPSTSRHRRPPCFQMKLRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAK-GKDPTGG-----KKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDT-GISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKRE 370 S+ S S +R R + L SPH + + E L++ RR R VLK D + ++RIA +D G K+E+ K A+ TA L+A R+GGRAA++S +GLD + ++ + QL S+++T E + KL++F W K +CLDA +VL LSSG+LFGGV QGA++S AT S V F LA+ T R++ L L + P LR +E+ VAKDG+KAV T RL+P++P +P+G YNY+YGV+++ F GIF GSLKPY LD+YLG +GK ++ S GM Q LL A V VL+G ++Q+A +D +E Sbjct: 23 STRSSSIARTR------VVLNQSPHDDDEE--EARLQILTTRRKQIRAVLKSA-------DALRESRIAALPRDADGNVLYTKKEEDTKTALTFTAFLVAAGAVALRVGGRAALVSAVGLDFMTESPELQQQLESILKTAETMDYTTKLLLFTAAWTAVKCLCLDAGGIVLALSSGILFGGVLQGAILSAAAATVGSSVAFGLAKLNTPVRQKALQLLEEYPSLRGIEKVVAKDGLKAVLTLRLAPILP-IPLGLYNYVYGVTNVGWGPFCGGIFLGSLKPYLLDSYLGYFGKSIVDGSIQQDAGGM---------QDTLLLVALGVSVLIGVFASQLASETWDAVLQE 346
BLAST of NO17G02910 vs. NCBI_GenBank
Match: XP_002186400.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >ACI65870.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 190.3 bits (482), Expect = 1.700e-44 Identity = 121/320 (37.81%), Postives = 185/320 (57.81%), Query Frame = 0 Query: 56 NHNQWKEEE---LELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLD-ILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKRE 370 N ++ +EE L++WK+RR R LK + R ++ Q + + D K + K A+ TA ++A R+GGRAA++S +GLD + ++ + + L+ V+ T + + KL++F W K +C DA + L LSSG+LFGGV QGA++S AT S V F LA+ T R++ L L++ P LR +E+ VAK+G KA+ T RL+PL+P +PIG YNY+Y ++++ +DF GIF GSLKPY LD+YLG +GK L ++G A+ + Q LL A VL+G ++Q+A +D E Sbjct: 228 NQDELMKEESVRLQVWKSRRNQIRQTLKSADQV--RIFRLQQGWVPELGDDGKPLKSDGKVALTLTAFVIAAGAIALRIGGRAALVSTLGLDFVTENPELKANLDIVLNTADNMDPVTKLLLFTASWTAVKVLCFDAAGVALALSSGILFGGVLQGAVVSAAAATFGSTVAFGLAKLDTPLRKKGLGLLDEYPSLRGIEKVVAKEGFKAILTLRLAPLLP-IPIGAYNYIYSITNVPLLDFCGGIFIGSLKPYLLDSYLGYFGKSL-----------VDGTADQNGWQDTLLLAALGFSVLIGVFASQLASETWDSVLEE 533
BLAST of NO17G02910 vs. NCBI_GenBank
Match: KOO24394.1 (hypothetical protein Ctob_008225 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 188.3 bits (477), Expect = 6.300e-44 Identity = 121/316 (38.29%), Postives = 177/316 (56.01%), Query Frame = 0 Query: 60 WKEE-----ELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLARTYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREA 371 WKE+ E+W++R +R + + + + R A+ ++ K+A VA+A + + + R GGRAA++S +GLDI+ D GI Q++ V+ E G G +V F W++AK +D +A+ L SSG+LFGGV +GALIS V AT SL+ L+R +E+V + KRP+ R L + V DG K VF RLSP++P +P G Y Y+YG S +S + F AG F GSLKPY LDAYLGV K +L +GA+ D+ LL G LVLVG + ++A ++D A+ +A Sbjct: 53 WKEQMKETAAQEVWQSREEFARGSFRALISFKEDARETAEKRAARRQEGKXXXXXXTKSAFVASAAAVLLGATLLRFGGRAALVSALGLDIVADLGIGDQIDQVLLYAEQAG-GWTVVAFIGAWMIAKVFLIDVIAIALAFSSGILFGGVLEGALISAVGATLGSLIALSLSRGLLQERVAGFIQKRPVARGLAKVVEADGFKTVFVLRLSPVLP-IPTGSYPYIYGTSKLSPLTFAAGYFLGSLKPYLLDAYLGVLSKQIL-----------DGASLDDSKDVLLLVG-LGALVLVGVFATELANESWDLAEVKA 354
BLAST of NO17G02910 vs. NCBI_GenBank
Match: EJK45668.1 (hypothetical protein THAOC_35698 [Thalassiosira oceanica]) HSP 1 Score: 182.2 bits (461), Expect = 4.500e-42 Identity = 137/394 (34.77%), Postives = 210/394 (53.30%), Query Frame = 0 Query: 49 LRDSPHQNHNQWKEEELELWKARRGISRTVLKPVAMLSRRKDKIMQARIAKGKDPTGGK--KEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDIL-QDTGISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKREA-MMMMPVLEGEEEAEWDWWT-MLGITRPKGGVWVEEW-----KRLETAVQDE-----WKQTIRQLAE 426 L +P + +E L+++ RR R VLK K+ + + DP GK K + K+AV TA ++A + RLGGRAA++S +GLD ++ + L SV+ +G +L +F W V K C DA +VL L+SG+LFGGV QGA++S AT S F LA+ T R++ L + + P LR +E+ VAKDG+KA+ T RL+P++P +PIG YNY+YGV+++ + F GIF GSLKPY LD+YLGV+GK + ++G + Q LL A V VL+G ++Q+A +D E + E E++ E T +G+ P+ V ++ +R+ +++E W T+ +L E Sbjct: 64 LASTPEEEERLVEEARLKVFSDRRRTIRWVLKNA---ESTKNYRIANDLVPELDPETGKPIKSDGKSAVTITAFVVAGGAVLLRLGGRAALVSALGLDFASENPELKDGLESVLGYANTMGTESELFLFILAWTVVKVFCFDAGGVVLALASGILFGGVIQGAVVSAFAATVGSSAAFGLAKIDTPVRKKALDLVEEYPSLRGIEKVVAKDGLKAILTLRLAPVLP-IPIGLYNYVYGVTNVPYLQFAGGIFLGSLKPYLLDSYLGVFGKQI-----------VDGTTQDGGLQDFLLLVALGVSVLIGVFASQLAEETWDSINEEVEAKKAEISESEDDEEGGVMTEFMGVGLPQFIVKFQQALQAADERVNKLIEEEMEAKVWNCTMAELEE 442
BLAST of NO17G02910 vs. NCBI_GenBank
Match: OEU21825.1 (hypothetical protein FRACYDRAFT_258815 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 177.6 bits (449), Expect = 1.100e-40 Identity = 106/237 (44.73%), Postives = 149/237 (62.87%), Query Frame = 0 Query: 131 LGGRAAVMSMMGLDILQDT-GISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFD 365 +GGRAA++S +GLD +QD + +Q+N V+E E + K +F W + K+ C DA +VL SSG+LFGGV QGA++S + AT S V F LA+ T R++ L + + P LR LE+ VA +G+KAV T RL+P++P +P+G YNY+YGVS+I +F GIF GSLKPYFLD+YLG +GK L+ S A GA T Q +L G VL+G ++Q+A +D Sbjct: 9 MGGRAALVSAVGLDFIQDNPDMQNQINQVLEYTETMDPILKSGLFIFGWTLTKTFCFDAAGIVLAFSSGILFGGVLQGAVMSALGATIGSSVAFALAKADTPIRKKALEVVEENPSLRGLEKVVADEGLKAVLTLRLAPILP-IPLGMYNYVYGVSNIRYWEFAGGIFLGSLKPYFLDSYLGYFGKSLVDGSAAAQAAENGGAG---TLQDYVLIGVLGFSVLIGVFASQLAAETWD 241
BLAST of NO17G02910 vs. NCBI_GenBank
Match: GAX24518.1 (hypothetical protein FisN_18Lh072 [Fistulifera solaris]) HSP 1 Score: 177.2 bits (448), Expect = 1.400e-40 Identity = 126/326 (38.65%), Postives = 182/326 (55.83%), Query Frame = 0 Query: 54 HQNHNQWKEEE---LELWKARRGISRTVLKPVAMLSRRKDKIMQ-ARIAKGK---DPTGGKKEEVKNAVVATALLLAVVTAVARLGGRAAVMSMMGLDILQDT-GISSQLNSVMETVEGLGEGEKLVVFFCLWVVAKSVCLDALALVLGLSSGVLFGGVWQGALISTVCATAASLVGFQLAR--TYFREQVLTQLNKRPLLRALERAVAKDGIKAVFTFRLSPLVPALPIGGYNYLYGVSSISTVDFLAGIFAGSLKPYFLDAYLGVWGKDLLSSSEGGSGAGMEGAAEADTAQAALLFGAFFVLVLVGTLSAQIAGRAFDEAKRE 370 HQ + +EEE L++ ARR R VLK L R+ +I R A G D + ++ K A+ TA ++A R+GGRAA++S +GLD + D+ + QL S+++T E + KL++F W K +CLDA +VL LSSG+LFG AT S V F LA+ T R++ L L++ P LR +E+ VAKDG+KA+ T RL+P++P +P+G YNY+YGV+++ F GIF GSLKPY LD+YLG +GK ++ S GM Q LL A V VL+G ++Q+A +D +E Sbjct: 41 HQTPHDEEEEETARLQILTARRKQIRAVLKSAETL--RESRIASLPRDANGNFLLDASSKGEDINKTALTLTAFVIAAGAVALRVGGRAALVSAVGLDFMTDSPELQQQLESILQTAETMNPITKLLLFTAAWTAVKCLCLDAGGIVLALSSGILFGXXXXXXXXXXXXATVGSSVAFGLAKMDTPIRQKALQVLDEYPSLRGIEKVVAKDGLKAILTLRLAPVLP-IPLGLYNYVYGVTNVGWGPFCGGIFLGSLKPYLLDSYLGYFGKSIVDGSIQQDTGGM---------QDTLLLVALGVSVLIGVFASQLASETWDAVLQE 354 The following BLAST results are available for this feature:
BLAST of NO17G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02910 ID=NO17G02910|Name=NO17G02910|organism=Nannochloropsis oceanica|type=gene|length=4479bpback to top protein sequence of NO17G02910.1 >NO17G02910.1-protein ID=NO17G02910.1-protein|Name=NO17G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=561bpback to top Synonyms
Publications
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