NO17G02770, NO17G02770 (gene) Nannochloropsis oceanica

Overview
NameNO17G02770
Unique NameNO17G02770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2196
Alignment locationchr17:808004..810199 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:808004..810199 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02770.1NO17G02770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02770.1NO17G02770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02770 ID=NO17G02770|Name=NO17G02770|organism=Nannochloropsis oceanica|type=gene|length=2196bp
ATGTTCGACGCTGTGGAGGGAGGGAGGGAGGGAGGGAGTGAGGAGGGGCC
AGTCTCCATGCTCCTGCCTCGCTTGGTGACGGTGGTGCAGCCAATGGAGG
AGGGATCCAAGAAGGGAGAGGCCCAAGAGGAAGAGGAGGAGGAGCGAGAA
GAGGTAGAGCGACGgtacgtctccgtcctgcccgaaaagaggggttaaga
taatattaagaagcattccccccacttcccttgtctccctcccttcctcc
ctctctgcctccctcctccctttctccgttactcagGCCGCGGAAGGAAG
CTGAGTCTCTGGCTTTGGCGGTTAATGCCAGCTTATACTGGGGCACCTCG
GCCCTGTGGGGGGTCTTTGACTCTCTCAACAGCACGCTGCAGCAGCAGGA
GGAGGAGGAGGAGGAGGGAGGGAGGGAGGGAGGGGGAAGTATGAAAAAAG
AGAAGAAACAGCAACATTTTCATCACTTTTATTTGCCCAGGGAGGTGGAA
GAGAGCGAGAAGACACCGGTGGTGCAGGCGGAGgtgaggggtggggaggc
aggagggagggagggagggagggaaggagggaggaactgcagaagcgtga
agtcccatcccacacctctctccttcctcccctttctcctcccccctctc
tctccttctctagTGGCACCCCTCTGCAAGTCACGCCTGTGCCAACGTCC
TGAACACGGCCGTGCGATTACAAAAAGGCGGCCAACTCGGCTTCTTTGAG
gtaaacacgagccctcccttcctccctccctccctccctccctccttctc
tcccttccttcctccccatgtcggaagcgatcgacgaatctctcattatc
cctccctcctcccctccattcctcccctctcctagATCTGGCCAGAGCAA
GGGCCGCTGGGCAGCGTCCTCCGAAAAAAACAAGAGGGGCAATACCACGA
GAACGGAGCCAGgtagggagggaggtagggagggagggaggaagggaggg
aggaaggggtcacctcactcacctgctcctctcgtcaatctctcatccgc
tcaccttccctctttcccttcctccctcaggccctgcgctcaaccgtcat
ctaattaatctccctcctccccctccctccttccctcccctccctcagGT
CCTGCATGGGCTACGCCAAACGCTCCTTCAATCCAGGCGGTGACGTGGCT
GTCTTCTCCCTCGCCCTCTGTGCCGACCAGAACCCTATTCCTGGGACGgt
atgttggctcgccctccctccctccctccttccctccctccctcccttat
tcacgcgtatggcgatgcgagctctcctcattctaccctccttcctcccc
tttctcccttcctccctcattcacgctgctggccacgagagctctataaa
tgcacctcattccatcttttcccccttgtttcctccctccctccctccct
ccctccctccctccctccaagGTGGCCTCGGGGGTGATCAAAAACTTGGG
ATCCAGCGCCGTGTGTGCCGTCACTCTTAGGGTCTATAAACTGGCCCACG
ACGACGAAGAGGAGGAGGACGGAAGGGAGGGGGGGAGGGAGgtaagtgta
aaaaggatggaaggaggaagggagggaaggagggagggagggaggaagga
agagggggacgcagtgccggttacaaggtggaaggatcaagcagccacac
atgcttctgaatatttgaaacgggcctgcctgtcatgaccgacacactct
ctcgcttcccttctttctccctccttccctgccatccttcctatcgcccc
tccctccagCCCTCCCTCCTCAGCGAGCTTCGCCTTGAGGGCTACCTTGC
CCCCCACGCCTTTCTCGTTTATCAAGTGCAGGCATCGGCCGACTTTTCTG
CGAGAGgtaagggagaaggaaggaaggaggaaaaaaaaaaagaataactc
aggcaattatatttctggaagcagtggagctgatcctattccttccccct
ccctccctccttccctccctccctccttccctcagACCGCCACGCCGTGG
CCCTGCTCGGCAATTACTCTCTCTGCACGACCTCCAAGCAAGCAGACCCA
TTTCAAACACGCTCCTGGGCTCCTCCTCCCCCTCCTCCCCCTCCTTCTTC
GCCCGTGTTCAAGGACAGGTTAAGCAGAGAAATGGGTGAGGCCTAG
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protein sequence of NO17G02770.1

>NO17G02770.1-protein ID=NO17G02770.1-protein|Name=NO17G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=351bp
MFDAVEGGREGGSEEGPVSMLLPRLVTVVQPMEEGSKKGEAQEEEEEERE
EVERRPRKEAESLALAVNASLYWGTSALWGVFDSLNSTLQQQEEEEEEGG
REGGGSMKKEKKQQHFHHFYLPREVEESEKTPVVQAEWHPSASHACANVL
NTAVRLQKGGQLGFFEIWPEQGPLGSVLRKKQEGQYHENGARSCMGYAKR
SFNPGGDVAVFSLALCADQNPIPGTVASGVIKNLGSSAVCAVTLRVYKLA
HDDEEEEDGREGGREPSLLSELRLEGYLAPHAFLVYQVQASADFSARDRH
AVALLGNYSLCTTSKQADPFQTRSWAPPPPPPPPSSPVFKDRLSREMGEA
*
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Synonyms
Publications