NO17G02710, NO17G02710 (gene) Nannochloropsis oceanica

Overview
NameNO17G02710
Unique NameNO17G02710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2174
Alignment locationchr17:792437..794610 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:792437..794610 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR029ngnoR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02710.1NO17G02710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02710.1NO17G02710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02710 ID=NO17G02710|Name=NO17G02710|organism=Nannochloropsis oceanica|type=gene|length=2174bp
CCCGTCGGCAGCAGGCCCCTCCTCTTACGCCTAGTTCGACCTGAGATGAC
ACTGGTTCACGCGGCAATGAGAACAATGACACAGTTAAGCATCTGGTAAT
GTCCCCGTGACACACGGTCTGTTTTTTCCGGATGGGACGATGCCCTGCCT
TTTTGACCCACACTCTTCGCTCCAGCCCTGGAGCCGACGCAAAGACACAA
GAAGCCGCAGGCGCGTTTTCTTCAAACCTTTGCCTCCTTATCAGAGAAAG
GGGCCAGGGCCGCTGTGACGGGATCACTGTAAACACCCTTTCGATGGTCG
TACATGAGTGCGCTTTACAAGGTCTCCTTGAGTGGGTGGTGTTGGCTGGT
GTACAACGCCCACAACAGAAGGCTCCCTCTCCGTCCTTCCCTCCGCCTTC
GCGTCGATCCTCCCTCCGGGTTCGGTATTTCCCTTCCCCTAGCTAATCAT
CCATGCAGCCAGCCCCACATGCACAAACAGTGACACATGCATATTCTTAC
ATAAAGAGAGAAGAAGGACGAGTCCTGACTGGTGCAAGAAGCCAAGTTTT
GCCCTTCCTGGCCAGGCTAGCCTCCTGCCTTCATCTTCGTCAGTCTCACG
CATAAACCTAACCACAGGCGCAAACAGAGCCACTCACACCTCTGCATGTC
CATGAGGCGAGCAAGAAGACGAGAAAAATTATGCAGTCGAGCGTCAAAAG
CTGCCTTCTATTGTGGTCTCCAATAATAATAAAATTCGGTCTCGGCTCCG
TCACTCCCTCTCACATACTCCTTCTCCCCCCGCTTTTTCCATACGAACGT
ATCTTCACAACCTACAGGGTTCTCACATTGAAAGGGAGCGGCAACGCAAG
AGTGAGTGAAGAAGAAGCGACGACACTGCGGTCGAAGCATCGTCAACCCT
GCTTTTTGTCGCCCCTACGGCCCCCTTTTCTTCTCCCGATTACCTTCTAT
TTTTCTTCGTGTTGCAACATGCGGCGGCGTCACGTCCAGACGCTGTAAAT
GTCAAAAAGCTCAGAAAGCAGCGGCAGCCGCAGCAGCAGCAACATCATGA
AGAACAGCAGCTGCGATGAGAGTAGAGCCATGACGAACATCGGCCACCTG
ACCTCGGAAGCCAATTGCGGGCCAGCCGGCGAGGCCCCCCCCCTCTACAA
ACCAATCCTTGTCGGCACCACCGATTTAAAAGAAGAAATAGTACCAAGGA
ACGACAGCATCTGCAGCGGTGGGGATGACACGCCGTGCTATTCGTCCTCC
TCCTCCTCCACATCGCCCTCATCCTCGCCACCAGCAGTGCTACCGCCATT
GCCGTCCCTGTCGCTTCATGAGGGCAGAGGCGCAAGAATAAGTAGTGTAC
CTTCCACAGGGAGCCTGAATTCGGCAGGTGATGATAGCATCACATCCACC
TCCTCTTCGTCCTCCTCGTCCTCGTCAGCCACAGGGTTGATTATGGAGAC
GACGACTACGTCGACGGCCCCCAATAGCGACAGCAGCAGCAACAGCAACA
GCAACGGCAGCAGCAGCAGTCCTCCCTTCCATCCGTTTGGTGCCACCTAC
TCCTCTTTTTCCCCACCGTTCGCGCCAATTTCAGATGTGAATGGTCCCAG
CGCAGGAACAGCACCACCTGCTGCAGCAGCAGCACCACCAGCAGCAGCAA
CATTAGCAAAAGCAGGTGTCGCAGGTGTAGCAGGTGGAGAACGAGGACCT
TTCTCCTTCAGTACCTCACCTTCCCTCACTACCTCCTCCTCCTCCTCCTC
CTCCTCCTCCCTCCACTTACCTCCTCCCGCACTGCCCTCCCAGTTTGGTC
TAGGAGCGTTCGCGTTTGCAGGCAATACCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCATTCGGCCTCGGCCGGCAAGAAACCCCACTAAC
TGGCTTCAAAGAAAGAGAGAGTCGGTCTTCCCCTTCATTCTCCTCCACCA
CCATCTCCTTCCATCCCTCCCCCCCCCCTCCTCAACCTGTTCGCTCTCCT
TCTCCCAGGCATCGCCCCCTCGGATTTCTGTGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAACACCACCAGCAGCAGCAATACCAGCACCACCAGTACCG
AGACAAGCATCAACACCTTCAACAGCAGCAGCAGCAGCAAGAGGAGAAGC
ACGCAGGGGGGGAGGGAGGACTGA
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protein sequence of NO17G02710.1

>NO17G02710.1-protein ID=NO17G02710.1-protein|Name=NO17G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MSKSSESSGSRSSSNIMKNSSCDESRAMTNIGHLTSEANCGPAGEAPPLY
KPILVGTTDLKEEIVPRNDSICSGGDDTPCYSSSSSSTSPSSSPPAVLPP
LPSLSLHEGRGARISSVPSTGSLNSAGDDSITSTSSSSSSSSSATGLIME
TTTTSTAPNSDSSSNSNSNGSSSSPPFHPFGATYSSFSPPFAPISDVNGP
SAGTAPPAAAAAPPAAATLAKAGVAGVAGGERGPFSFSTSPSLTTSSSSS
SSSSLHLPPPALPSQFGLGAFAFAGNTSLPPSLPPSLPPSFGLGRQETPL
TGFKERESRSSPSFSSTTISFHPSPPPPQPVRSPSPRHRPLGFLCSSSSS
SSSSNTTSSSNTSTTSTETSINTFNSSSSSKRRSTQGGRED*
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Synonyms
Publications