NO17G02600, NO17G02600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02600 vs. NCBI_GenBank
Match: XP_005855260.1 (hypothetical protein NGA_0078900 [Nannochloropsis gaditana CCMP526] >EKU21104.1 hypothetical protein NGA_0078900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.5 bits (807), Expect = 2.100e-82 Identity = 168/242 (69.42%), Postives = 187/242 (77.27%), Query Frame = 0 Query: 103 REYFFGKEGEFDEDLAYLGISRQRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVFLAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQG--VFDGKVYVFEYVVGREGGREG 343 +EYFFG GEFDEDLAYLGISRQRLLLN VAT LALGANFVGVTSALLNTFSTPE M WK+DVLYPVRGFKR+VD++DGYEFRYPQSWLSDQA+ LA+TQARTA+++ PSSPS + + VRPDAAFGPPGGNREENLS++KS VMPGF+L TLG P AAAELLLSTAIAPPGSGKVA LV A+EE R G + KVYVFEY+VGREGGR+G Sbjct: 102 KEYFFGTAGEFDEDLAYLGISRQRLLLNAGVATTLALGANFVGVTSALLNTFSTPETMSDWKLDVLYPVRGFKRFVDTEDGYEFRYPQSWLSDQAILLADTQARTATLSS-PSSPSD------------------RPPRAPPSSTRAVRPDAAFGPPGGNREENLSVIKSVVMPGFSLAETLGPPTAAAELLLSTAIAPPGSGKVANLVMAQEETRDGGGKTLERKVYVFEYLVGREGGRDG 324
BLAST of NO17G02600 vs. NCBI_GenBank
Match: EWM24138.1 (Photosystem II PsbP, oxygen evolving complex [Nannochloropsis gaditana]) HSP 1 Score: 314.3 bits (804), Expect = 4.700e-82 Identity = 168/241 (69.71%), Postives = 186/241 (77.18%), Query Frame = 0 Query: 104 EYFFGKEGEFDEDLAYLGISRQRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVFLAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQG--VFDGKVYVFEYVVGREGGREG 343 EYFFG GEFDEDLAYLGISRQRLLLN VAT LALGANFVGVTSALLNTFSTPE M WK+DVLYPVRGFKR+VD++DGYEFRYPQSWLSDQA+ LA+TQARTA+++ PSSPS + + VRPDAAFGPPGGNREENLS++KS VMPGF+L TLG P AAAELLLSTAIAPPGSGKVA LV A+EE R G + KVYVFEY+VGREGGR+G Sbjct: 103 EYFFGTAGEFDEDLAYLGISRQRLLLNAGVATTLALGANFVGVTSALLNTFSTPETMSDWKLDVLYPVRGFKRFVDTEDGYEFRYPQSWLSDQAILLADTQARTATLSS-PSSPSD------------------RPPRAPPSSTRAVRPDAAFGPPGGNREENLSVIKSVVMPGFSLAETLGPPTAAAELLLSTAIAPPGSGKVANLVMAQEETRDGGGKTLERKVYVFEYLVGREGGRDG 324
BLAST of NO17G02600 vs. NCBI_GenBank
Match: CBN74878.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 158.7 bits (400), Expect = 3.300e-35 Identity = 96/237 (40.51%), Postives = 132/237 (55.70%), Query Frame = 0 Query: 98 ETLTAREYFFGKEGEFDEDLAYLGISRQRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVFLAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 E YFFGKE E +D+ G++R+R + + + A+ALG N GVTSALL + + PE +VD+L+P+ GFKR+ +DGYEF YP +W+ D + L R + L +SP++ R P+ AFGP GG+ EN+S+VKS +MPGF+L+ TLG P AAE +LST IAPPGSG+ L++A E+ R G G VY FEY V Sbjct: 244 EKFQVSTYFFGKENELWDDMRANGVTRERFVRYSLLGGAVALGGNLFGVTSALLGSVA-PEASRDLRVDLLFPIGGFKRFYSPEDGYEFMYPDTWVGDSGLAL----RRQRDLEDLRASPAA--------------------VARARQRRSSSAPEVAFGPQGGDGIENVSVVKSELMPGFSLKRTLGDPKEAAEKILSTVIAPPGSGREWELLEAFEDNREPG---GLVYQFEYRV 452
BLAST of NO17G02600 vs. NCBI_GenBank
Match: CEM11308.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 132.9 bits (333), Expect = 1.900e-27 Identity = 92/217 (42.40%), Postives = 117/217 (53.92%), Query Frame = 0 Query: 122 ISRQRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVFLAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPP--GGNREENLSLVKST--VMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 I+ +R L A A AL AN G TSALL +PEQ ++D +YP+ G KRYV+ DGYEF YP +WL+D A++ A+ AR PL +S A +G PD AFGPP GG+ +EN+S+VKST + LG P AAE LL AIAP GSGKVA L+DA E+R G G+VY+FEY+V Sbjct: 49 ITPRRRFLVLLGAAAAALAANLFGATSALLRL--SPEQARKLRLDQIYPIDGLKRYVNELDGYEFLYPSNWLADVALYTAKDAAR----RPLAAS-------------------FDEGRPVKRAAAQGEAPDVAFGPPGGGGDSKENVSVVKSTLRLTDDRAFFSLLGPPKQAAETLLREAIAPEGSGKVAMLIDALSEQREPG---GEVYLFEYIV 237
BLAST of NO17G02600 vs. NCBI_GenBank
Match: XP_024368472.1 (psbP domain-containing protein 7, chloroplastic-like isoform X1 [Physcomitrella patens] >XP_024368473.1 psbP domain-containing protein 7, chloroplastic-like isoform X1 [Physcomitrella patens] >PNR60270.1 hypothetical protein PHYPA_003063 [Physcomitrella patens]) HSP 1 Score: 119.4 bits (298), Expect = 2.200e-23 Identity = 81/217 (37.33%), Postives = 111/217 (51.15%), Query Frame = 0 Query: 122 ISRQRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVFLAETQ----ARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 + R+R +L T TALALGA+F+G TSA+L+ PE G +VDVLYP+ G+KR +++ G+EF +P++W+ DQ + Q R+ + P+ PS + + P AFGPPG E N+S+V + V GFTLE LG P A +L +IAP GS KVA L+DA R GV Y EY V Sbjct: 66 VFRRRFILGTITGTALALGADFLGSTSAILSL--NPELFRGLRVDVLYPIGGYKRCLETSQGFEFIFPKTWVGDQTLLYRAVQRGERERSLDLPPI-RQPS---------------------------KRRLTEPIVAFGPPGTLGELNVSVVVAPVAQGFTLE-KLGNPTEAGITILKRSIAPEGSNKVAELIDAAARRDDAGV---TYYTLEYTV 248
BLAST of NO17G02600 vs. NCBI_GenBank
Match: XP_005649374.1 (Mog1p/PsbP-like protein [Coccomyxa subellipsoidea C-169] >EIE24830.1 Mog1p/PsbP-like protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 115.5 bits (288), Expect = 3.200e-22 Identity = 81/199 (40.70%), Postives = 101/199 (50.75%), Query Frame = 0 Query: 139 LGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVF--LAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGV-RPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 L +NF G TSALL+ K+D LYPV G KR +D+ +GYEF YP WLSDQ ++ AE R AS+ P P++ S A + V P AA+GPPG EENLS+V + + GF +E LG P AAE LST +AP GSG+ A L+DA E R G Y EY V Sbjct: 48 LVSNFGGSTSALLSV-DGGRLAGRLKLDALYPVAGHKRCLDTQNGYEFLYPSRWLSDQRLYRRYAERVERQASLDPPPAARS--------------------------ANSRSVAEPTAAYGPPGSTGEENLSVVVAPIAGGFKIE-NLGGPRQAAERFLSTTVAPEGSGRTADLIDAYERRDESGEL---YYTLEYTV 215
BLAST of NO17G02600 vs. NCBI_GenBank
Match: CEM34869.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 114.8 bits (286), Expect = 5.500e-22 Identity = 86/217 (39.63%), Postives = 110/217 (50.69%), Query Frame = 0 Query: 122 ISRQRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVFLAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPP--GGNREENLSLVKST--VMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 I+ +R L A +ALGAN G+TSALL +PEQ ++DV+YP+ GFKRYV+ DGY +R A A A+ PL +S A + PD AFGPP GG+ +EN+S+VKST + LG P AAE LL AIAP GSGKVA L+DA E+R G G+VY+FEY+V Sbjct: 90 ITPRRRFLVLLGAAVVALGANLFGITSALLRL--SPEQARKLRLDVIYPIDGFKRYVNEVDGYSYRL------GPAHRYTREAAHDAARRPLAAS-------------------FDEGRPVKRAAAQSEAPDVAFGPPGGGGDAKENVSVVKSTLRLTDDRAFFSLLGPPKQAAETLLREAIAPEGSGKVAMLIDALSEQREPG---GEVYLFEYIV 276
BLAST of NO17G02600 vs. NCBI_GenBank
Match: GAX76730.1 (hypothetical protein CEUSTIGMA_g4177.t1 [Chlamydomonas eustigma]) HSP 1 Score: 114.8 bits (286), Expect = 5.500e-22 Identity = 81/214 (37.85%), Postives = 113/214 (52.80%), Query Frame = 0 Query: 123 SRQRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAVF--LAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 S +RL L+ A AT +ALG NF G+TS LL + + ++DVL PV GFKRYVD D +EF+YP WL+DQ V A+ R S+ P PS + P AAFGPPG E+N+S++ + +MPGF LE +LG+ +AA+ L+T IAP GS + A + A+E R +G+ Y EY++ Sbjct: 75 STRRLALSAASATFIALGGNFFGITSFLL-SLDKGQLARSSRLDVLVPVLGFKRYVDYADMFEFQYPAQWLADQTVARRAAQRAERERSLDP-PSLGQQRKAVDPYQ--------------------EVAEPSAAFGPPGSTGEKNVSIIAAPIMPGFILE-SLGSAESAAKRFLTT-IAPEGSERSATFLGAQERRSPEGLL---YYQMEYII 261
BLAST of NO17G02600 vs. NCBI_GenBank
Match: EFJ23506.1 (hypothetical protein SELMODRAFT_15379, partial [Selaginella moellendorffii]) HSP 1 Score: 110.9 bits (276), Expect = 7.900e-21 Identity = 76/211 (36.02%), Postives = 103/211 (48.82%), Query Frame = 0 Query: 125 QRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAV-FLAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 +R + A L +GANF+G TS +L PE ++DVLYPVRGF R +D+D G+EF YPQ W DQ + + + +A LP+ V P AFGPPG + E N+S++ + ++P F+LE LG AA+L+L IAPPGS K A LVDA R + V+ Y EY V Sbjct: 7 RRFTIGILSAAGLGIGANFLGTTSFVLGL--NPEVARSLRLDVLYPVRGFFRCLDTDKGFEFIYPQDWFGDQKILYRSIEKAEKERPLDLPALKEQRSPAKVL-----------------------VEPVTAFGPPGTDGEVNVSVIVAPILPSFSLE-QLGDAKEAAKLILDKFIAPPGSKKTATLVDALTRRDEKAVY----YTLEYCV 187
BLAST of NO17G02600 vs. NCBI_GenBank
Match: XP_002975305.2 (psbP domain-containing protein 7, chloroplastic [Selaginella moellendorffii]) HSP 1 Score: 110.9 bits (276), Expect = 7.900e-21 Identity = 76/211 (36.02%), Postives = 103/211 (48.82%), Query Frame = 0 Query: 125 QRLLLNTAVATALALGANFVGVTSALLNTFSTPEQMDGWKVDVLYPVRGFKRYVDSDDGYEFRYPQSWLSDQAV-FLAETQARTASIAPLPSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXARGKGVRPDAAFGPPGGNREENLSLVKSTVMPGFTLEGTLGAPAAAAELLLSTAIAPPGSGKVARLVDAREERRGQGVFDGKVYVFEYVV 335 +R + A L +GANF+G TS +L PE ++DVLYPVRGF R +D+D G+EF YPQ W DQ + + + +A LP+ V P AFGPPG + E N+S++ + ++P F+LE LG AA+L+L IAPPGS K A LVDA R + V+ Y EY V Sbjct: 59 RRFTIGILSAAGLGIGANFLGTTSFVLGL--NPEVARSLRLDVLYPVRGFFRCLDTDKGFEFIYPQDWFGDQKILYRSIEKAEKERPLDLPALKEQRSPAKVL-----------------------VEPVTAFGPPGTDGEVNVSVIVAPILPSFSLE-QLGDAKEAAKLILDKFIAPPGSKKTATLVDALTRRDEKAVY----YTLEYCV 239 The following BLAST results are available for this feature:
BLAST of NO17G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02600 ID=NO17G02600|Name=NO17G02600|organism=Nannochloropsis oceanica|type=gene|length=1560bpback to top protein sequence of NO17G02600.1 >NO17G02600.1-protein ID=NO17G02600.1-protein|Name=NO17G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bpback to top Synonyms
Publications
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