NO17G02540, NO17G02540 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G02540
Unique Name	NO17G02540
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3289
Alignment location	chr17:748184..751472 +

Link to JBrowse

Properties


Property Name	Value
Description	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:748184..751472 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003347	JmjC_dom

Homology

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BLAST of NO17G02540 vs. NCBI_GenBank
Match: XP_024366925.1 (uncharacterized protein LOC112278089 [Physcomitrella patens] >PNR27136.1 hypothetical protein PHYPA_030617 [Physcomitrella patens])

HSP 1 Score: 117.9 bits (294), Expect = 1.200e-22
Identity = 88/292 (30.14%), Postives = 126/292 (43.15%), Query Frame = 0

Query:   76 EGVVERLTAILGPERVLHVSCVAEGEAFSGATHKAQSVPLSLPSLLRFFLVAARETKEIPKKGNETEEDEGGGVDGLDFYLAQAPVYEREKVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPLAPLWEHIDAPNALLPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEERL 368
            +G ++RL  + GP  V  V     G  F G     + +P+S  S L     ++R     P      EE     +  L FYLAQA +Y  E                                  S PL+PL E ID P+ L   S + A N WM++  +S+S HYD  HNLL ++ G K V  +PPS  PSL P P F  ++NHS+   V                       D A+        +    ++  + AGD LF+PEGW+HQV+SD  T+A+N+W+   +  +L
Sbjct:   49 KGGLQRLKHLAGPATV-QVMATTSGSNFYGDIRGHERIPISFESFLDLADRSSRNAGVSPSSIEMPEEFAFMELRDLQFYLAQAGIYSEE------------------------------ITATSDPLSPLREDIDTPSFL--QSSVSAINFWMSVNGSSSSTHYDPYHNLLCIVSGCKEVKFWPPSAAPSLYPLPIFGEASNHSSVDFVNP---------------------DFAKYPRFLAAMQN--YQSVILRAGDALFLPEGWYHQVNSDAVTIAINFWWPSKISLKL 284

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BLAST of NO17G02540 vs. NCBI_GenBank
Match: XP_002906496.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65897.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 110.2 bits (274), Expect = 2.400e-20
Identity = 80/235 (34.04%), Postives = 99/235 (42.13%), Query Frame = 0

Query:  149 VDGLDFYLAQAPVYEREKVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPLAPLWEHI---DAPNALLPSSL----LVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRP-----VPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEERLEGGR 372
            VDGLDFYLAQ P+                                        P A   E I      + LLP+ L    +   NLWM ++   T+LHYD+ HN+L VL G+KTV L+PPS T  L P+P  + S NHS   IV                                  EK P       +  EV AGD L IPEGWWHQVDSD  T+A+NYW+ G  E+ +   R
Sbjct:   92 VDGLDFYLAQCPI------------------------------------AVFKPAATCTEAILPEIMNDFLLPTCLQDKPVTQVNLWMTVRPGRTTLHYDAYHNILVVLYGKKTVTLYPPSETEKLYPFPVHTKSVNHSQVNIV------------------------------QPDLEKHPRFPEAAAQRFEVAAGDALVIPEGWWHQVDSDEFTIAVNYWWNGVREQLVANKR 260

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: CBN77138.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 109.8 bits (273), Expect = 3.100e-20
Identity = 86/289 (29.76%), Postives = 121/289 (41.87%), Query Frame = 0

Query:   94 VSCVAEGEAFSGATHKAQSVPLSLPSLLRFFLVAARETKEIPKKGNETEEDEGGGVDGLDFYLAQAPVYEREKVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPLAPLWEHIDAPNALLPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEERLEGGREGLKGRHQRTL 383
            +SC  +G++F G     Q V L L       +V   E +E+ +    + ++      GLD+YL Q PV  RE+ +                                  L+ +      P+ +    LL   NLWM    T+T+LHYD+NHNLL VL+G K V L PP +T  +   P FS SANHS   + P                      DEA          R      +V  G+ +FIPEGWWHQV S   TVA+N W++G      EG  + ++  + R L
Sbjct:   75 ISCTKKGDSFRGDKASRQQVNLKLMD-----MVEIAEAQELGQPHWASSDEV-----GLDYYLCQCPVVSREEGKPEV-------------------------------LSAIAGEFRTPSCVSKEDLL-QINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTAGVHAMPVFSESANHS--GLQPAETAAVVDG-------------DEA---------ARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSKHMRNYYLRCL 297

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: XP_024586175.1 (Uncharacterized conserved protein, contains JmjC domain [Plasmopara halstedii] >CEG49806.1 Uncharacterized conserved protein, contains JmjC domain [Plasmopara halstedii])

HSP 1 Score: 108.6 bits (270), Expect = 7.000e-20
Identity = 82/270 (30.37%), Postives = 110/270 (40.74%), Query Frame = 0

Query:  101 EAFSGATHKAQSVPLSLPSLLRFFLVAARETKEIPKKGNETEEDEGGGVDGLDFYLAQAPVYEREKVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPLAPLWEHIDAPNALLPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRP-----VPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEE 366
            + + G+ H  QSV L     + ++  + R         NE+   +   VD LDFYLAQ  +   +   K                                 L  + E I+ P   L    +   NLWM +  + T+LHYD+ HN+L VL GRK V L+PPS +  L P+P  S S NHS   IV                                  +K P       +  E+ AGD L IPEGWWHQVDSD  T+A NYW+ G  E+
Sbjct:   52 DCYHGSEHAKQSVELKFGDFVDYYQASYR---------NESHWLQ--TVDDLDFYLAQCTIAVSKPDAKAI-------------------------------LPDIMEDINLPK-YLKDKHISQVNLWMTVHASRTTLHYDAYHNILVVLYGRKFVTLYPPSDSQKLYPFPLHSKSVNHSQVNIV------------------------------QPDIKKHPQFLKASAKQFEIKAGDALMIPEGWWHQVDSDEFTIATNYWWNGMREQ 248

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: XP_008909580.1 (hypothetical protein PPTG_14785 [Phytophthora parasitica INRA-310] >ETI40538.1 hypothetical protein F443_14085 [Phytophthora parasitica P1569] >ETK80628.1 hypothetical protein L915_13732 [Phytophthora parasitica] >ETL34053.1 hypothetical protein L916_13629 [Phytophthora parasitica] >ETL87330.1 hypothetical protein L917_13437 [Phytophthora parasitica] >ETM40551.1 hypothetical protein L914_13523 [Phytophthora parasitica] >ETN05110.1 hypothetical protein PPTG_14785 [Phytophthora parasitica INRA-310] >ETO69184.1 hypothetical protein F444_14116 [Phytophthora parasitica P1976] >ETP10303.1 hypothetical protein F441_14014 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 108.2 bits (269), Expect = 9.100e-20
Identity = 63/150 (42.00%), Postives = 80/150 (53.33%), Query Frame = 0

Query:  217 LPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIV-PEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEE 366
            L +  +   NLWMA++   T+LHYD+ HN+L VL G+KTV L+PPS T  L P+P  + S NHS  +IV P  E                    EA              +  EV AGD L IPEGWWHQVDSD  T+A+NYW+ G  E+
Sbjct:  131 LQNKPVTQVNLWMAVQSGRTTLHYDAYHNVLVVLYGKKTVTLYPPSETEKLYPFPVHTKSMNHSQVSIVQPNLE--------------KHSRFPEAS------------AQRFEVVAGDALVIPEGWWHQVDSDEFTIAINYWWNGVREQ 254

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: ETP38446.1 (hypothetical protein F442_13931 [Phytophthora parasitica P10297])

HSP 1 Score: 108.2 bits (269), Expect = 9.100e-20
Identity = 63/150 (42.00%), Postives = 80/150 (53.33%), Query Frame = 0

Query:  217 LPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIV-PEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEE 366
            L +  +   NLWMA++   T+LHYD+ HN+L VL G+KTV L+PPS T  L P+P  + S NHS  +IV P  E                    EA              +  EV AGD L IPEGWWHQVDSD  T+A+NYW+ G  E+
Sbjct:  131 LQNKPVTQVNLWMAVQSGRTTLHYDAYHNVLVVLYGKKTVTLYPPSETEKLYPFPVHTKSMNHSQVSIVQPNLE--------------KHSRFPEAS------------AQRFEVVAGDALVIPEGWWHQVDSDEFTIAINYWWNGVREQ 254

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: KUF84374.1 (Lysine-specific demethylase 8 [Phytophthora nicotianae])

HSP 1 Score: 108.2 bits (269), Expect = 9.100e-20
Identity = 63/150 (42.00%), Postives = 80/150 (53.33%), Query Frame = 0

Query:  217 LPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIV-PEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEE 366
            L +  +   NLWMA++   T+LHYD+ HN+L VL G+KTV L+PPS T  L P+P  + S NHS  +IV P  E                    EA              +  EV AGD L IPEGWWHQVDSD  T+A+NYW+ G  E+
Sbjct:  137 LQNKPVTQVNLWMAVQSGRTTLHYDAYHNVLVVLYGKKTVTLYPPSETEKLYPFPVHTKSMNHSQVSIVQPNLE--------------KHSRFPEAS------------AQRFEVVAGDALVIPEGWWHQVDSDEFTIAINYWWNGVREQ 260

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: CCA15560.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19
Identity = 75/266 (28.20%), Postives = 107/266 (40.23%), Query Frame = 0

Query:  103 FSGATHKAQSVPLSLPSLLRFFLVAARETKEIPKKGNETEEDEGGGVDGLDFYLAQAPVYEREKVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPLAPLWEHIDAPNALLPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEERLE 369
            +SG     QSV L     + ++      T    +            V  L+FYL Q P++  ++  +                              SLP   L +H   P+ LL    L   NLWMA   + T++HYD+  N+L VL G+K V L+PPS    L PYP +S S+NHS                             + +         +       V+AG  ++IPEGWWHQV SD  TVA+NYWY G  ++ L+
Sbjct:   62 YSGDERSRQSVELKFGDFITYYTAKYTNTDHWLR-----------SVSDLEFYLCQCPMFVHDRPSE-----------------------NGILKKPSLP--KLMQHFHVPD-LLNREELSQINLWMAAAPSETNIHYDAYQNILVVLAGKKVVTLYPPSEFAKLRPYPIYSESSNHS-------------------------QVDSQKKKNFMDSNAGKASGMVLNVEAGSAVYIPEGWWHQVKSDGFTVAINYWYNGLRQQLLD 265

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: PRW58134.1 (transcription factor jumonji domain-containing [Chlorella sorokiniana])

HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19
Identity = 62/148 (41.89%), Postives = 75/148 (50.68%), Query Frame = 0

Query:  222 LVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWYEGFVEERLEG 370
            L AAN W +L+   +SLHYD   NLL V+RG K V L PP+ TP L P P    SANHS   +      G               AV                 +  EV+AGD LFIPEGWWHQVDS+  T+A N+W+EG V  +L G
Sbjct:   77 LHAANFWASLQSMRSSLHYDPYQNLLCVVRGHKRVRLVPPAATPHLQPQPVTHESANHSPADL------GAPDLERFPALAAALAAV-----------------QVFEVEAGDALFIPEGWWHQVDSEAGTLAANFWWEGSVSRQLGG 201

[Close]

BLAST of NO17G02540 vs. NCBI_GenBank
Match: XP_005851205.1 (hypothetical protein CHLNCDRAFT_137889 [Chlorella variabilis] >EFN59103.1 hypothetical protein CHLNCDRAFT_137889 [Chlorella variabilis])

HSP 1 Score: 106.3 bits (264), Expect = 3.500e-19
Identity = 65/157 (41.40%), Postives = 77/157 (49.04%), Query Frame = 0

Query:  203 LAPLWEHIDAPNALLPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVLRGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGXXXXXXXXXXXXXXXAVDEAEXXXXXXXEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDPQTVALNYWY 360
            L  L E + AP  L+    L  AN W +L+ T +SLHYD   NLL V+RG KTV L PPS TP LAP P  S SANHS   +     G                                P  +  E+ AGD LFIPEGWWHQV S   T+A+N+WY
Sbjct:  132 LQALMEDLGAP-CLIQRVQLSQANFWASLRATRSSLHYDPYSNLLCVVRGAKTVWLLPPSATPHLAPQPLTSESANHSPADLAQPDLG-----------------------RFPGLEAALPKLQVFELAAGDALFIPEGWWHQVHSTDGTLAVNFWY 264

The following BLAST results are available for this feature:

BLAST of NO17G02540 vs. NCBI_GenBank

BLAST of NO17G02540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_024366925.1	1.200e-22	30.14	uncharacterized protein LOC112278089 [Physcomitrel...	[more]
XP_002906496.1	2.400e-20	34.04	conserved hypothetical protein [Phytophthora infes...	[more]
CBN77138.1	3.100e-20	29.76	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_024586175.1	7.000e-20	30.37	Uncharacterized conserved protein, contains JmjC d...	[more]
XP_008909580.1	9.100e-20	42.00	hypothetical protein PPTG_14785 [Phytophthora para...	[more]
ETP38446.1	9.100e-20	42.00	hypothetical protein F442_13931 [Phytophthora para...	[more]
KUF84374.1	9.100e-20	42.00	Lysine-specific demethylase 8 [Phytophthora nicoti...	[more]
CCA15560.1	1.600e-19	28.20	conserved hypothetical protein [Albugo laibachii N...	[more]
PRW58134.1	1.600e-19	41.89	transcription factor jumonji domain-containing [Ch...	[more]
XP_005851205.1	3.500e-19	41.40	hypothetical protein CHLNCDRAFT_137889 [Chlorella ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL160	nonsL160	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR053	ncniR053	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR029	ngnoR029	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR028	ngnoR028	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008427	NSK008427	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO17G02540.1	NO17G02540.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|270595	gene_9323	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_101759g1	gene6331	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO17G02540.1	NO17G02540.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO17G02540 ID=NO17G02540|Name=NO17G02540|organism=Nannochloropsis oceanica|type=gene|length=3289bp
TCATTGCTGTTCTGCCTGTTGCTGCGAGGGTGCAGCAAGGGGGAGGAGGT
TAATAATTAAGAAGTGGGTTTCAGGACAAGACAAGACGCCGCCGGGTGAA
AAGGACTGCCGCAGGGATGAGAGCGATCGAACGACATATTTCATTCGCTT
TCATTGCAGACCAACTACGATGCATGTAGGTGGATATGGAAGTCGGAGTG
CGTTCAGAGTGCCTTTGCTCTCGGGCAGCGCTGGAGAAGCCGCGACGTGC
CGTTCCTTCCTCGTTTCCTCGCTTCCTTCTCACCCCACACAACCACCCAT
ATGCTCACACAGAGACAGATCTCGATGAGTCAAGGCAACAAGAAACGTCC
TCGTCCTCATCCTCGTACTCCTCCAGCCATTCTTTCCCTCCAATCCCCCC
TCCCCTCTTCAGTCTCCTTCTACAACACCTATGTCAAGCGCCACCGTCCA
TGCCTACTAAAACAGGCCGGACCCTCCCTTGTCCCCAAGGCAATGACCTT
GTTAGGCATCAAAGACGGTGAAGCGGAGGGAGTAGTGGAGCGACTGACCG
CGATTCTTGGGCCTGAGCGTGgtaagaactacacctggggttgtaccccc
ctctttcaacccctcctggtttcctccctccctcctctatggaccaacct
tcttccatcttcatccgatactgataccccgcattctgaacccatcgtat
atctttcttcccttgctttcctccagTCCTCCACGTCTCGTGCGTTGCCG
AAGGAGAGGCTTTCTCAGGCGCCACCCACAAGGCGCAGAGCGTTCCCCTC
TCCCTTCCCTCCCTCCTCCGCTTCTTCCTCGTCGCCGCCCGTGAGACAAA
GGAAATACCAAAAAAAGGCAATGAAACAGAGGAAGACGAGGGTGGGGGGG
TCGATGGACTGGATTTTTATCTGGCCCAGGCCCCGGTTTATGAGCGAGAA
AAGGTTGAAAAGAGGAAGACGGAGAATGGAGGGGGAGGAGGAAGCGGAGG
AGGAAGAGGAGGAGGAAGAGGAGGAATAAGACGAAGAAGAAGAAGAGAAC
AAAGCTTACCGCTCGCGCCACTCTGGGAGCACATCGATGCgtacgtacct
cgtgccacttcacccctccccccccccctccctcgttaattactctgaac
ccctaccttccctttcttcccccctcccttcctccctccctccccccctc
agGCCGAATGCGCTCCTCCCCTCCTCTCTCCTCGTCGCTGCAAATCTCTG
GATGGCTCTTAAACACACCAGCACCTCCCTCCACTACGATAGCAACCATA
ACCTCCTAGCTGTGTTGCGGGGGAGGAAAACGgtacgtcctccctccctc
tcttcctccctccctccctatttccttccctccttccactacgacagcaa
ttacaacatcttccctgtgttgtggggaaggaaacggtacatcctccctc
cctccctccctccctccctccctccctcctccctcccattactacgacat
cgaccccaattgtcccgaaaaatgaaacctcctccctttcttacctccgt
ccatccctccctctaaacattcctcccaccttccctccttccctcttttt
atcgggatatgcctctccatccccccccccattcaatagcattcacgatc
ctcccgctctccctccctctttcctccttcttgccacacacacagGTCCA
CCTTTTTCCTCCCTCCCTCACGCCCTCTCTCGCTCCCTACCCTCCTTTTT
CGACCTCCGCCAACCACAGCACGTGGACGATCGTGCCCGAAAGGGAGGGA
GGGAGGGAGGGAGGGAGAAGGGAGGGAGGGAGGGAAGGAGGGCGCTTCGC
TGTCGACGAGGCCGAGGGGGGAGGGAGGGACGGAGGAGAGAAGAGGCCGG
TGCCAAGGACATGTGAGGTGGATGCGGGAGgtgagtcgagaagggcgtag
gggatggaaggagggagggaggattggagggataaacaaccgcggatcaa
atcatgagcagtaagaggtacttcctccgacacgagttccttattccgcc
ctccctccctccctccctccagACGTGCTTTTCATCCCTGAAGGGTGGTG
GCATCAAGTCGACTCTGACCCTCAAACAGTCGCCCTGAACTACgtaagcc
cctcccaccctccctccctccttccttccttccttctttccttccttccc
tctccctctccccttcctccctcgctaccttctttcccttccttctatca
ttgacgattacaagggcacgaggaggcaactcttcattacacactcacgt
tccttcctctctccctccctccctccccccctcctttttagTGGTACGAA
GGTTTCGTCGAGGAGCGCCTTGAGGGAGGGAGGGAGGGATTGAAGGGAAG
ACATCAGAGGACATTAGAAGGAAGAGGAAAAGAAAAATATGAAGAATATA
AAGAAAGAAAAAAAGAAGAAGACGAGGAAGCGGTGGTGGAGGAGGAGGAT
GAGGAGGACGAGGAGGACGAGGAGGACGAGGAGGAGGACGAGGAGGAGGA
CATGCTTCACTACTACCTTCGGGCTGTCCTTCAACGCAGCCTCGAAAAGG
AGAAAAGGCGAATGGTGGCTGAAGCGAGGCTGAAAGCAAAAAAACgtgag
gagggaggtgggaaaggagggagggagggaggaagggagaaatcataaaa
ttacaacacgaccgttttggggaaatgttctgacgatcttgccctccctc
cttccctccctccctccttccctccctccctctctttctctctccttcct
atagACGTAGATGAATATTTACGCGTCTCTCGAAAGGAGGATGTCATTTG
TCCGCTTTTCAAGAATCAGGCTACCTGGTACAGGCTTCTCTACGATAGCC
TCTCTTCCTCCTTTCTTCCCTCCCTTCCTCCCTCCCTTCCTTCCACTCTT
TCCTTATTCGAAAGTGTGCTCCTACTCCTTTCCCTCGGCGAGATGAAGGA
TGTCTTGACTCAACTTATCGGGAGGGAGAGAGGTAAGGGAGGGAAGGAGG
AGTGGGTTCGAGCGCTCTTGCTCACGAGGCCTGTGGTGGTAGAGGCCATT
ACGCGGACTTGGGAAGGGGAGGGGGAGGAGGAGGAGGAGGAGGAGGGAGA
GGGGAAGGGTGGGGAAGAGATGGCGAAGTTCTTTGCAGTGATTTTCCCGG
AAGGTCATGAAGAGGCGATTCAAAAGCATTTATTCGAAGGGAAGGAGGCT
TTTGCGCGGGAGGCATGTGCCCGAGTAGTAGGGTTGTGA

protein sequence of NO17G02540.1

>NO17G02540.1-protein ID=NO17G02540.1-protein|Name=NO17G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=620bp
MLTQRQISMSQGNKKRPRPHPRTPPAILSLQSPLPSSVSFYNTYVKRHRP
CLLKQAGPSLVPKAMTLLGIKDGEAEGVVERLTAILGPERVLHVSCVAEG
EAFSGATHKAQSVPLSLPSLLRFFLVAARETKEIPKKGNETEEDEGGGVD
GLDFYLAQAPVYEREKVEKRKTENGGGGGSGGGRGGGRGGIRRRRRREQS
LPLAPLWEHIDAPNALLPSSLLVAANLWMALKHTSTSLHYDSNHNLLAVL
RGRKTVHLFPPSLTPSLAPYPPFSTSANHSTWTIVPEREGGREGGRREGG
REGGRFAVDEAEGGGRDGGEKRPVPRTCEVDAGDVLFIPEGWWHQVDSDP
QTVALNYWYEGFVEERLEGGREGLKGRHQRTLEGRGKEKYEEYKERKKEE
DEEAVVEEEDEEDEEDEEDEEEDEEEDMLHYYLRAVLQRSLEKEKRRMVA
EARLKAKKHVDEYLRVSRKEDVICPLFKNQATWYRLLYDSLSSSFLPSLP
PSLPSTLSLFESVLLLLSLGEMKDVLTQLIGRERGKGGKEEWVRALLLTR
PVVVEAITRTWEGEGEEEEEEEGEGKGGEEMAKFFAVIFPEGHEEAIQKH
LFEGKEAFAREACARVVGL*

Synonyms

Publications