NO17G02390, NO17G02390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02390 vs. NCBI_GenBank
Match: EWM24161.1 (glutaredoxin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 228.0 bits (580), Expect = 2.000e-56 Identity = 122/156 (78.21%), Postives = 136/156 (87.18%), Query Frame = 0 Query: 1 MRSLFLVAAVLLVSLQATLGFLLPFPSTPR---SLSSPLRSSMAPGEEAAERAAATDKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEKTLAELKK 154 MR LF LL+SLQ+ LGFL+P +PR S S PLRSSMAPG+EAAER+AA +KIKS+V +NKVMLFMKGSKLFPQCGFSNTAVSILRA DAEFETFDVLSD LVREEIK +S+WPTIPQC++NGEFVGGSDILLEM+ESGELEKTLAELKK Sbjct: 1 MRVLFF-TCTLLLSLQSILGFLIPPAPSPRPRISSSFPLRSSMAPGDEAAERSAAVEKIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTLAELKK 155
BLAST of NO17G02390 vs. NCBI_GenBank
Match: XP_005762961.1 (hypothetical protein EMIHUDRAFT_78687 [Emiliania huxleyi CCMP1516] >XP_005792613.1 glutaredoxin [Emiliania huxleyi CCMP1516] >EOD10532.1 hypothetical protein EMIHUDRAFT_78687 [Emiliania huxleyi CCMP1516] >EOD40184.1 glutaredoxin [Emiliania huxleyi CCMP1516]) HSP 1 Score: 144.8 bits (364), Expect = 2.200e-31 Identity = 64/93 (68.82%), Postives = 80/93 (86.02%), Query Frame = 0 Query: 54 DKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEK 147 D+IK+MV NK+ LFMKGSKLFPQCGFSNTAV IL + + E+ETFDVL+D+ VR+ +KT+S WPTIPQC+I GEFVGG D+L+EMY+SGEL + Sbjct: 6 DRIKAMVEGNKIFLFMKGSKLFPQCGFSNTAVQILNSYNVEYETFDVLADNAVRDGVKTYSNWPTIPQCYIEGEFVGGCDLLIEMYQSGELSE 98
BLAST of NO17G02390 vs. NCBI_GenBank
Match: XP_009032378.1 (hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens] >EGB12728.1 hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens]) HSP 1 Score: 138.7 bits (348), Expect = 1.600e-29 Identity = 77/139 (55.40%), Postives = 97/139 (69.78%), Query Frame = 0 Query: 11 LLVSLQATL-GFLLPFPSTPRSLSSPLRSSMAPGEEAAERAAATDKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEKTL 149 L+ +L AT F+ P + PR SP R A + A T +I+SMV DN VMLFMKG+K+FPQCGFSN AV IL A+ +FET+D LSD VR IK FS WPTIPQ +++GEFVGGSDI+LEMYE+GEL++ + Sbjct: 7 LIAALAATASAFVAPGAAAPR--LSPRR---AGDDVEPPPDATTKRIQSMVDDNTVMLFMKGTKIFPQCGFSNMAVQILNAIGQDFETYDCLSDENVRSTIKEFSDWPTIPQLYVDGEFVGGSDIMLEMYEAGELQEMI 140
BLAST of NO17G02390 vs. NCBI_GenBank
Match: WP_015123948.1 (Grx4 family monothiol glutaredoxin [Synechococcus sp. PCC 6312] >AFY60404.1 monothiol glutaredoxin, Grx4 family [Synechococcus sp. PCC 6312]) HSP 1 Score: 137.9 bits (346), Expect = 2.700e-29 Identity = 64/95 (67.37%), Postives = 79/95 (83.16%), Query Frame = 0 Query: 55 KIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEKTLA 150 KI S+V NK+M+FMKGSKL PQCGFSNTAV IL ++ A FETFDVL+D VR+ IK +S WPTIPQ +INGEFVGGSDIL+E+Y+ GEL++ +A Sbjct: 8 KIDSLVKSNKIMVFMKGSKLMPQCGFSNTAVQILNSLGAPFETFDVLADYEVRQGIKDYSNWPTIPQIYINGEFVGGSDILIELYQKGELQEMVA 102
BLAST of NO17G02390 vs. NCBI_GenBank
Match: WP_013191654.1 (Grx4 family monothiol glutaredoxin [Trichormus azollae] >ADI64638.1 glutaredoxin-like protein ['Nostoc azollae' 0708]) HSP 1 Score: 136.0 bits (341), Expect = 1.000e-28 Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 0 Query: 54 DKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEKTL 149 +KI ++V NK+M+FMKG+KL PQCGFSN V IL + FETFDVLSDS +R+ IK +S WPTIPQ +INGEFVGGSDIL+EMY+ GEL++T+ Sbjct: 7 EKIDNLVQQNKIMVFMKGNKLMPQCGFSNNVVQILNTLGVPFETFDVLSDSEIRQGIKEYSEWPTIPQVYINGEFVGGSDILIEMYQKGELQQTV 101
BLAST of NO17G02390 vs. NCBI_GenBank
Match: XP_002294502.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88336.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 134.4 bits (337), Expect = 3.000e-28 Identity = 61/103 (59.22%), Postives = 82/103 (79.61%), Query Frame = 0 Query: 50 AAATDKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEKTLAELK 153 +A DKI+S+V +N V+LFMKGSKLFPQCGFSNTA IL++ + +F T DVL+D VR+ +K FS WPTIPQ ++ GEF+GGSDI++EMY+SGEL + + + K Sbjct: 51 SATNDKIQSLVDENPVLLFMKGSKLFPQCGFSNTACQILQSYNIDFHTVDVLADDEVRQGVKVFSDWPTIPQLYVCGEFIGGSDIMIEMYQSGELGEMIEKAK 153
BLAST of NO17G02390 vs. NCBI_GenBank
Match: KOO34091.1 (glutaredoxin-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 134.4 bits (337), Expect = 3.000e-28 Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 0 Query: 7 VAAVLLVSLQATLGFLLPFPSTPRSLSSPLRSSMAPGEEAAERAAATDKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAV----DAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGEL 145 VA++L+++L + L P TP SS R S P + A D+I+ M+ADNKV+LFMKG K+ PQCGFSNTAV IL+AV +F+TF+VL+D+ VRE IK S WPTIPQC+I+GEFVGG D+L+EMY++GEL Sbjct: 4 VASMLVLALSSAAA--LQLPQTP--ASSVRRRSPPP---SLNEAMTKDRIEKMIADNKVLLFMKGDKIQPQCGFSNTAVMILKAVTESAGCDFQTFNVLADNDVREGIKKHSNWPTIPQCYIDGEFVGGCDLLIEMYQNGEL 138
BLAST of NO17G02390 vs. NCBI_GenBank
Match: PDH33115.1 (monothiol glutaredoxin, Grx4 family [Candidatus Thioglobus sp. MED-G23]) HSP 1 Score: 134.0 bits (336), Expect = 3.900e-28 Identity = 61/98 (62.24%), Postives = 79/98 (80.61%), Query Frame = 0 Query: 53 TDKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEKTLAE 151 + +IK V N+VMLFMKG++ FPQCGFS A+ IL+A+ AEFET DVL D +R+ IK FS WPT+PQ +INGEFVGGSDI++EMYE+GEL+K L++ Sbjct: 4 SQRIKETVDSNRVMLFMKGNRDFPQCGFSGRAIQILQALGAEFETADVLMDDEIRQGIKEFSNWPTVPQLYINGEFVGGSDIMMEMYENGELKKALSQ 101
BLAST of NO17G02390 vs. NCBI_GenBank
Match: KRO76948.1 (glutaredoxin [Methylophilales bacterium BACL14 MAG-120910-bin43] >KRP07058.1 glutaredoxin [Methylophilales bacterium BACL14 MAG-120920-bin58]) HSP 1 Score: 132.9 bits (333), Expect = 8.600e-28 Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 0 Query: 54 DKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLEMYESGELEKTLA 150 DKI S++ +NK++LFMKGS FPQCGFS+ A IL A DA +ET DVL D +RE IKTFS WPTIPQ +IN EFVGG+DI+ EMYESGEL K ++ Sbjct: 5 DKINSLIENNKILLFMKGSPKFPQCGFSSLACQILTACDANYETVDVLQDQDIREGIKTFSNWPTIPQLYINKEFVGGADIIREMYESGELAKVIS 100
BLAST of NO17G02390 vs. NCBI_GenBank
Match: XP_005767573.1 (glutaredoxin, partial [Emiliania huxleyi CCMP1516] >EOD15144.1 glutaredoxin, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 131.3 bits (329), Expect = 2.500e-27 Identity = 58/84 (69.05%), Postives = 72/84 (85.71%), Query Frame = 0 Query: 54 DKIKSMVADNKVMLFMKGSKLFPQCGFSNTAVSILRAVDAEFETFDVLSDSLVREEIKTFSAWPTIPQCFINGEFVGGSDILLE 138 D+IK+MV NK+ LFMKGSKLFPQCGFSNTAV IL + + E+ETFDVL+D+ VR+ +KT+S WPTIPQC+I GEFVGG D+L+E Sbjct: 6 DRIKAMVEGNKIFLFMKGSKLFPQCGFSNTAVQILNSYNVEYETFDVLADNAVRDGVKTYSNWPTIPQCYIEGEFVGGCDLLIE 89 The following BLAST results are available for this feature:
BLAST of NO17G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02390 ID=NO17G02390|Name=NO17G02390|organism=Nannochloropsis oceanica|type=gene|length=1864bpback to top protein sequence of NO17G02390.1 >NO17G02390.1-protein ID=NO17G02390.1-protein|Name=NO17G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=154bpback to top Synonyms
Publications
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