NO17G02380, NO17G02380 (gene) Nannochloropsis oceanica

Overview
NameNO17G02380
Unique NameNO17G02380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1531
Alignment locationchr17:700435..701965 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:700435..701965 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G02380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02380.1NO17G02380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02380.1NO17G02380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02380 ID=NO17G02380|Name=NO17G02380|organism=Nannochloropsis oceanica|type=gene|length=1531bp
CTCGCACATGCTTTCTGGCTGGCCATGCATGCCCGGCTGAGAATGTTAAC
TTCGCAGTGGGCATATACCATGGCCGATTATATACAACAGTGCCGTGTAT
TATGTTTTCTTACTTTTGAGCTGTGTTTTACTCTCTCTTGGACACCCATC
GGCGTCTAGGTTGCTTCTGTCGATCACAGCCCGTCCCATCATTGTGTGTG
TTGGATAAGAGCCCTTGACAGCATAAGATTAGTAACGTCTGCACTAGATT
CATCTCACATTTTTCCTGTCTCACAGCAATATGTGGCTGCTACGCCCAAT
GACATGCGCCCTCTTTTTGGGCCCCCTCTTCCTCTCTGCAACGGCCCAGC
AAGACATGgtaagagttaagacagaaaacagtaaaaagtaacaccatgac
cgagccagatctttcccttgagtagatgttttccctgtgcgcgtactctg
cactgcatgcgccctgtacccaagcccttctctcaccctgcctttcgcac
ccgaattccctacagGCCGACGGTGAGCAGTTGAAGATGCGCTTCTTTAC
GAAGGACCAGAACAATGCTGTCAGTACTACAGCAGCAGGAGCAACAGACA
TGAGACAAGCGGTGGCTGGCCCGAAGCATGTCGCATGGGGGCAGGTAGGC
AGCACGAGCGCTCCTCGTGACATCGCACGTGACTCGGTAGAGGAGAAGGA
GGGAGACAAGCATGTCGCATGGGGCCGGGTGGGCAGCACGAGCGCTCCTC
GTGACATCGCACGTGACTCGGTAGAGGAGAGGGAGGGAGACAAGCATGTC
GCATGGGGCCGGGTGGGCAGCACGAGCGCTCCTCGTGACATCGCACGTGA
CTCGATAGAAGAGAAGGAGGTAGACAAGCATGTCGCATGGGGCCGGGTGG
GCAGCACGAGCGCTCCTCGTGACATCGCACGTGACTCGGTAGAGGAGAAG
GAGGGAAACAAGCAGGGAGCGGAAGCTGATGTGGCGATGGGCTCCACCAA
CCACCACGGCGACAATAACCGTAGCCTGCGTGGGACTCACTAAGAGTTAT
AAACTTAGCTTCGCCTTTACATACATGAATTAAAACCCACCATGTAAGCA
TTTCGCAATATAAGGAATAAAAAATCAAAAACAAAAAATAGGCAATGAGA
TATTATAATAGCGTCCCCTTCCAAAGCTGCCACAGCTGCTGCTCCTGCCG
CTGGCCGATCCAACATTGTGACCACTGGTTGCGGTCCTCTGGTGGTTTGA
GCAGCAGAAGTGCTGCACCTACCTCGCGAAGATCAAACAACAATTGATAG
AGACCCCTTATAAAATGAAAGCAAGTGATATTTTAGTTGTTGTCCGCCAT
TTAAAAACAGAGAGGACGAAAGCGTGAAATTGAATGTGAATCAATTAAGT
GTCCAAGTGTGCATGCTGCACACCCTTCCATATGTGCTGGGGGTTAAGCC
ATCCAAACTGTCAAACAAACACACGACAAAAAACGAGGCGATGTAATAGA
GAGAATTAGCGACAAAGAAATATTTCATGCC
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protein sequence of NO17G02380.1

>NO17G02380.1-protein ID=NO17G02380.1-protein|Name=NO17G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bp
MWLLRPMTCALFLGPLFLSATAQQDMADGEQLKMRFFTKDQNNAVSTTAA
GATDMRQAVAGPKHVAWGQVGSTSAPRDIARDSVEEKEGDKHVAWGRVGS
TSAPRDIARDSVEEREGDKHVAWGRVGSTSAPRDIARDSIEEKEVDKHVA
WGRVGSTSAPRDIARDSVEEKEGNKQGAEADVAMGSTNHHGDNNRSLRGT
H*
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Synonyms
Publications