NO17G02370, NO17G02370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_089906242.1 (NmrA/HSCARG family protein [Chitinophaga rupis] >SEK40807.1 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [Chitinophaga rupis]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 83/249 (33.33%), Postives = 121/249 (48.59%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL---LDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL + G G QG L SGR+R+R ITR S A++L QG EL L + F+ KA G D +F+ T E+ GK L +AAV AGVQ ++FS E + T +K ++EEY+RTLP+ +++ AFF+ N+ + P + F I L +D R PF+ P A + + Q+ +G LP+ GD++SP+E V R+TG KA Y+ Sbjct: 7 PLITITGVLGKQGRSAAHTLLQSGRYRVRGITRRTDSPLALSLIEQGAELVSLPLDLGYKKDFV-KAFRGSDGVFMMTPGIVPPQTHEMELGKQLADAAVEAGVQHLIFSSLENVDKITAGKKFAPHFTDKARVEEYIRTLPIAS-SFIYMAFFYTNL----------MEFYPPRAEGDTLIFPIYLPRDFRAPFVDPLTATGPAILEIFSDPGQY-AGKALPVIGDIISPQEMVDTFVRVTGRKAVYS 242
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_093265924.1 (NmrA/HSCARG family protein [Saccharopolyspora shandongensis]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 92/257 (35.80%), Postives = 122/257 (47.47%), Query Frame = 0 Query: 22 LALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLLDRPFLDKAMAGVDVLF----------LATFSDHDGTELRQGKNLGNAAVAAGVQRVVFSGG----ERIGVDTMDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYTQLSLDFFR 265 + LVVG TG QG +L + GR R+R +TRN A LA G EL QG + DR LD AM GV +F L+ H+ E R GKN+ +AA AGVQ +V++ R GV T++NK +IEEY+R L +P L F EN V P Q S + D+ P I+ DIG AA P G + IAGD L+P E A++R TG + + +L L+ R Sbjct: 7 VVLVVGATGQQGGATAAELLARGR-RVRALTRNTTGAVARRLAEAGAELVQGDMGDRAALDAAMQGVQGVFSVQPTFITPELSPDVSHE-EERRWGKNVADAAKGAGVQHLVYASAVNAYRRTGVVTLENKREIEEYIRALGIP-ATMLRPVSFMENY----------VAMVPGQAAAGDELVS-AVRADVSQPLIALDDIGTFAALAFENPGDYI--GQAVEIAGDSLTPPEIADALSRATGRRLRHVELPLEPLR 247
BLAST of NO17G02370 vs. NCBI_GenBank
Match: SDX56322.1 (Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [Saccharopolyspora shandongensis]) HSP 1 Score: 111.7 bits (278), Expect = 3.800e-21 Identity = 92/255 (36.08%), Postives = 121/255 (47.45%), Query Frame = 0 Query: 24 LVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLLDRPFLDKAMAGVDVLF----------LATFSDHDGTELRQGKNLGNAAVAAGVQRVVFSGG----ERIGVDTMDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYTQLSLDFFR 265 LVVG TG QG +L + GR R+R +TRN A LA G EL QG + DR LD AM GV +F L+ H+ E R GKN+ +AA AGVQ +V++ R GV T++NK +IEEY+R L +P L F EN V P Q S + D+ P I+ DIG AA P G + IAGD L+P E A++R TG + + +L L+ R Sbjct: 2 LVVGATGQQGGATAAELLARGR-RVRALTRNTTGAVARRLAEAGAELVQGDMGDRAALDAAMQGVQGVFSVQPTFITPELSPDVSHE-EERRWGKNVADAAKGAGVQHLVYASAVNAYRRTGVVTLENKREIEEYIRALGIP-ATMLRPVSFMENY----------VAMVPGQAAAGDELVS-AVRADVSQPLIALDDIGTFAALAFENPGDYI--GQAVEIAGDSLTPPEIADALSRATGRRLRHVELPLEPLR 240
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_080865311.1 (NmrA/HSCARG family protein [Agrobacterium tumefaciens] >CUX55152.1 putative nucleoside-diphosphate sugar epimerase [Agrobacterium tumefaciens str. CFBP 5621]) HSP 1 Score: 110.9 bits (276), Expect = 6.600e-21 Identity = 85/247 (34.41%), Postives = 115/247 (46.56%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGT--LLDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATY 256 PL VVG T QG L S ++R+R +TRN S A LA G E+ L + L A G D +L T + D EL GK L +AAV AGV +VFS E + T +K + +Y+RTLP+ H ++ AFF+ N+ + QG +P +D R PF+ PT A +L+ F +G LPI GD++SPRE V R+TG KA Y Sbjct: 7 PLISVVGATSKQGRSVTMTLLKSNQYRVRALTRNPASAAARGLADLGAEIVVAPLGLGHQKELVTAFQGADGAYLMTPQLAPEDNAELALGKQLADAAVEAGVGHIVFSTLENVDKITAGKKFTPHFTDKALVADYIRTLPIAH-SFMSLAFFYTNL--------LEYYVPQMQGDTLLMPIYLP--EDFRAPFVDPTTATGPAVLSVLSDPDTF-NGKTLPIVGDIISPREMVETFQRVTGIKAEY 241
BLAST of NO17G02370 vs. NCBI_GenBank
Match: PSL48173.1 (uncharacterized protein YbjT (DUF2867 family) [Chitinophaga niastensis]) HSP 1 Score: 110.5 bits (275), Expect = 8.600e-21 Identity = 83/249 (33.33%), Postives = 123/249 (49.40%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL---LDRPFLDKAMAGVDVLFLATFS--DHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL +VG G QG + L SGR+R+R ITR S A++LA QG E + L + F++ A G D +F+ T S E+ GK L +AA+ AGV+ ++FS E + T +K KIEEY+R LP+ +++ AFF+ N+ + P F I L +D R PF+ P A + + Q+ +G LP+ GD++SP+E V R+TG KA Y+ Sbjct: 17 PLITIVGVLGKQGRSAARTLLQSGRYRVRGITRRVDSPEALSLAEQGAEFVRLPLDLGYKKDFVE-AFRGSDGVFMMTPSIVPPATHEMELGKQLADAAIEAGVRHIIFSSLENVDKITGGKMFAPHFTDKAKIEEYIRMLPVTS-SFIYMAFFYTNL----------IEFYPPDMKGDTLVFPIYLPKDFRAPFVDPLTATGPAVLEIFSNPGQY-TGKSLPVIGDIISPQEMVDTFIRVTGKKAVYS 252
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_106528827.1 (NmrA/HSCARG family protein [Chitinophaga niastensis]) HSP 1 Score: 110.5 bits (275), Expect = 8.600e-21 Identity = 83/249 (33.33%), Postives = 123/249 (49.40%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL---LDRPFLDKAMAGVDVLFLATFS--DHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL +VG G QG + L SGR+R+R ITR S A++LA QG E + L + F++ A G D +F+ T S E+ GK L +AA+ AGV+ ++FS E + T +K KIEEY+R LP+ +++ AFF+ N+ + P F I L +D R PF+ P A + + Q+ +G LP+ GD++SP+E V R+TG KA Y+ Sbjct: 7 PLITIVGVLGKQGRSAARTLLQSGRYRVRGITRRVDSPEALSLAEQGAEFVRLPLDLGYKKDFVE-AFRGSDGVFMMTPSIVPPATHEMELGKQLADAAIEAGVRHIIFSSLENVDKITGGKMFAPHFTDKAKIEEYIRMLPVTS-SFIYMAFFYTNL----------IEFYPPDMKGDTLVFPIYLPKDFRAPFVDPLTATGPAVLEIFSNPGQY-TGKSLPVIGDIISPQEMVDTFIRVTGKKAVYS 242
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_068342607.1 (NmrA/HSCARG family protein [Hymenobacter sp. PAMC 26554] >AMR29389.1 NmrA family protein [Hymenobacter sp. PAMC 26554]) HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20 Identity = 85/252 (33.73%), Postives = 128/252 (50.79%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTLL---DRPFLD--KAMAGVDVL---FLATFSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL +VG G QG L SG++R+R ITR S A ALA QG+EL L + F++ + GV ++ L+ + TEL GK + +AAV AGV+ ++FSG E + T +K ++EEY+RTLP+ +++ AFF+ N ++ PR T F I L +D R PF+ P A + + ++ +G LP+ GD++SP+E V A R+TG KA Y+ Sbjct: 7 PLITIVGVLGKQGRSAAHTLLESGQYRVRGITRRLDSPEARALAEQGIELVSVPLALGHGKEFVEAFRGSHGVFMMTPGILSVLPETHETEL--GKQVADAAVEAGVKHIIFSGLENVDTLTGGTKFAPHFTDKARVEEYIRTLPVTS-SFIYLAFFYTN---------LQEFYTPRLEGDT-LVFPIYLPKDFRAPFVDPLTATGPAVLEIFSNPDKY-AGKSLPVIGDIISPQEMVDAFVRVTGKKAVYS 244
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_056186904.1 (NmrA/HSCARG family protein [Flavobacterium sp. Root420] >KQX15997.1 NmrA family protein [Flavobacterium sp. Root420]) HSP 1 Score: 109.8 bits (273), Expect = 1.500e-20 Identity = 86/262 (32.82%), Postives = 125/262 (47.71%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL---LDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYTQLSL--DFFRRLP 268 PL +VG G QG + L SG +R+R ITR S A+ L QG EL L + +L KA G D +F+ T + E GK L +AAV AGV+ ++FS E + T +K IE+Y+RTLP+ +++ AFF+ N+ + T VR F I L +D R PF+ P A + + +Q+ +G LP+ G+++SP+E V R+TG KA Y+ DF P Sbjct: 17 PLITIVGVLGKQGQSAARTLLQSGHYRVRGITRRVNSPEALNLIQQGAELISVPLDLGYQKDYL-KAFRGSDGVFIMTPNIAPPQTHEFELGKQLADAAVEAGVKHIIFSSLENVDKITEGEKFAPHFTDKANIEQYIRTLPITS-SFIYMAFFYTNL-MEFYTPIVRG---------DTLVFPIYLPKDFRAPFVDPLTATGPAVLEIFSNPSQY-AGKALPVIGEIISPQEMVDTFTRVTGKKAVYSSAFTREDFLHHFP 265
BLAST of NO17G02370 vs. NCBI_GenBank
Match: WP_069061829.1 (NmrA/HSCARG family protein [Sinorhizobium sp. RAC02] >AOF92430.1 short chain dehydrogenase family protein (plasmid) [Sinorhizobium sp. RAC02]) HSP 1 Score: 109.8 bits (273), Expect = 1.500e-20 Identity = 88/250 (35.20%), Postives = 120/250 (48.00%), Query Frame = 0 Query: 20 LPLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL--LDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVF---------SGGERIGVDTMDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFI-SPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATY 256 +PL VVG T QG L SG++R+R +TRN SK A +LAA G E+ L + L A AG D +L T D E GK L +AAV AGV +VF SGG++ D K + +Y+RTLP+ H ++ AFF+ N+ + +G +P +D PF+ + T G +VL P T +G LPI GD++SPRE V R+TG KA Y Sbjct: 6 MPLISVVGATSKQGRSVATTLLKSGQYRVRALTRNQDSKEARSLAALGAEVVVAPLGPDHQNELAAAFAGADGAYLMTPQLLPQDNAEFALGKQLADAAVEAGVGHIVFSTLENVQKISGGKKFTPHFTD-KALVADYIRTLPVTH-SFVSLAFFYTNL--------LEYYVPQMEGDTLLMPIYLP--EDFCAPFVDATTATGPAVLSVLSDPATF--NGKTLPIVGDIISPREMVETFQRVTGVKAEY 241
BLAST of NO17G02370 vs. NCBI_GenBank
Match: SHE47654.1 (Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [Pedobacter caeni]) HSP 1 Score: 109.8 bits (273), Expect = 1.500e-20 Identity = 85/249 (34.14%), Postives = 123/249 (49.40%), Query Frame = 0 Query: 21 PLALVVGGTGLQGAGCLQDLRSSGRFRMRTITRNARSKPAVALAAQGVELYQGTL---LDRPFLDKAMAGVDVLFLAT--FSDHDGTELRQGKNLGNAAVAAGVQRVVFSGGERIGVDT--------MDNKIKIEEYLRTLPLPHVVYLHTAFFFENVATKRGTKRVRVTRDPRQGHITQYTFSIPLLQDMRIPFISPTDIGRVAATVLLAPITQFPSGSILPIAGDVLSPREFVSAVARLTGAKATYT 257 PL +VG G QG+ + L SGR+R+R TR S A++LA QGVEL L + F++ A G +F+ T + EL GK L +AAV AGVQ V+FS E + T +K ++E+Y+RTLP+ +++ AFF+ N+ V D F I L +D R PF+ P A + + Q+ +G LP+ GDV+S +E V R+TG KA Y+ Sbjct: 21 PLITIVGILGKQGSSAARTLLQSGRYRVRGTTRRIDSPEALSLARQGVELLSVPLSLGYKKEFVE-AFRGSAGVFMMTPGIAPPQTHELELGKQLADAAVEAGVQHVIFSSLENVDKITEGKKFAPHFTDKARVEDYIRTLPITS-SFIYMAFFYTNLM----EFYTPVVED------DTLVFPIYLPRDFRAPFVDPLTATGPAVLEIFSNPVQY-AGKSLPVIGDVISAQEIVDTFVRVTGKKARYS 256 The following BLAST results are available for this feature:
BLAST of NO17G02370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02370 ID=NO17G02370|Name=NO17G02370|organism=Nannochloropsis oceanica|type=gene|length=1833bpback to top protein sequence of NO17G02370.2 >NO17G02370.2-protein ID=NO17G02370.2-protein|Name=NO17G02370.2|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top protein sequence of NO17G02370.1 >NO17G02370.1-protein ID=NO17G02370.1-protein|Name=NO17G02370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bpback to top Synonyms
Publications
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