NO17G02330, NO17G02330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02330 vs. NCBI_GenBank
Match: EWM24178.1 (hsf-type dna-binding domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 122.5 bits (306), Expect = 5.700e-24 Identity = 71/139 (51.08%), Postives = 84/139 (60.43%), Query Frame = 0 Query: 54 LVPTRVSSRTSRN--PTSNIDSIYSYDPTEGRGGETDDETYYVQTEAPASPASTATGARQMHQRRGSGGEGKGSKKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 L+PTRVSSRT+RN + + +S+Y Y+ G+ + V TIPGFLTKT+EIFSS E KDLCGWG RGDTI+IK+VPEF+ARVLPRYFKHSNFQSFVRQLNM Sbjct: 49 LLPTRVSSRTARNALTSQSRNSVYQYEHPGGQA--VLNAVVKVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIPGFLTKTYEIFSSAEHKDLCGWGARGDTIVIKRVPEFAARVLPRYFKHSNFQSFVRQLNM 185
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCA14258.1 (cleavage induced conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 90.5 bits (223), Expect = 2.400e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 96 KHVMLPAFLSKTFEIFNLPEFSDMCGWNSTGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 160
BLAST of NO17G02330 vs. NCBI_GenBank
Match: XP_009538753.1 (hypothetical protein PHYSODRAFT_566381 [Phytophthora sojae] >EGZ05892.1 hypothetical protein PHYSODRAFT_566381 [Phytophthora sojae]) HSP 1 Score: 90.5 bits (223), Expect = 2.400e-14 Identity = 44/94 (46.81%), Postives = 57/94 (60.64%), Query Frame = 0 Query: 97 EAPASPASTATGARQMHQRRGSGGEGKGSKKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 + PA+P S AT + G K +P FL+KT+EIFS EF +CGW GDTI++ ++ F A VLPR+FKH NF SFVRQLN+ Sbjct: 25 KTPAAPPSAATKGKAATPTNAEG------KHVMLPAFLSKTYEIFSMPEFSHVCGWNANGDTIIVSQLEAFVALVLPRFFKHRNFPSFVRQLNL 112
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCI40692.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 97 KHVMLPAFLSKTFEIFNLPEFTDMCGWNATGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 161
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCI40693.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 97 KHVMLPAFLSKTFEIFNLPEFTDMCGWNATGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 161
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCI40694.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 97 KHVMLPAFLSKTFEIFNLPEFTDMCGWNATGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 161
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCI40695.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 97 KHVMLPAFLSKTFEIFNLPEFTDMCGWNATGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 161
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCI40696.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 96 KHVMLPAFLSKTFEIFNLPEFTDMCGWNATGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 160
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCI40697.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 96 KHVMLPAFLSKTFEIFNLPEFTDMCGWNATGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 160
BLAST of NO17G02330 vs. NCBI_GenBank
Match: CCI40698.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-14 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 126 KKTTIPGFLTKTFEIFSSGEFKDLCGWGPRGDTILIKKVPEFSARVLPRYFKHSNFQSFVRQLNM 191 K +P FL+KTFEIF+ EF D+CGW GDTI+++ + F A VLPR+FKH NF SFVRQLN+ Sbjct: 96 KHVMLPAFLSKTFEIFNLPEFTDMCGWNATGDTIIVRHLEAFVATVLPRFFKHRNFPSFVRQLNL 160 The following BLAST results are available for this feature:
BLAST of NO17G02330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02330 ID=NO17G02330|Name=NO17G02330|organism=Nannochloropsis oceanica|type=gene|length=6207bpback to top protein sequence of NO17G02330.1 >NO17G02330.1-protein ID=NO17G02330.1-protein|Name=NO17G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=753bpback to top Synonyms
Publications
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