NO17G02280, NO17G02280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02280 vs. NCBI_GenBank
Match: EWM24172.1 (ankyrin unc44 [Nannochloropsis gaditana]) HSP 1 Score: 253.4 bits (646), Expect = 1.600e-63 Identity = 127/212 (59.91%), Postives = 141/212 (66.51%), Query Frame = 0 Query: 15 LDRDREAHGPDTILYYARAGNVEGVMAMVKTDPAQVNYQRIVTPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGGWCPXXXXXXXXXXXXXXXXXXXPLVEVDSRDDDGSTALYRAALWGCGAAVRELLRKGANPSLVGGGGLLPVAVARARGHAECVMVLENEERMFALAKARALRRV 227 L RD EAHGPDTILYYARAG+++G+MAMV+ DP+Q NYQRIVTPLMWASYCGH HI SFLL+CGA IDQ +KRKGGWCP P V+VDSRDDDGSTALYRAALWGC A+R LL+KG NP + GGGGLLPV VARARG+ ECV VLE EER+F LAKARALRRV Sbjct: 15 LGRDIEAHGPDTILYYARAGDLDGMMAMVQEDPSQANYQRIVTPLMWASYCGHAHIVSFLLECGAHIDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKRKGGWCPLSVAASEGHVGVVRVLLANPRVDVDSRDDDGSTALYRAALWGCAGAIRALLKKGGNPRIPGGGGLLPVGVARARGYQECVDVLEGEERVFGLAKARALRRV 226
BLAST of NO17G02280 vs. NCBI_GenBank
Match: XP_005854033.1 (ankyrin unc44 [Nannochloropsis gaditana CCMP526] >EKU22326.1 ankyrin unc44 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 136.3 bits (342), Expect = 2.800e-28 Identity = 64/111 (57.66%), Postives = 72/111 (64.86%), Query Frame = 0 Query: 15 LDRDREAHGPDTILYYARAGNVEGVMAMVKTDPAQVNYQRIVTPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGGWCP 126 L RD EAHGPDTILYYARAG+++G+MAMV+ DP+Q NYQRIVTPLMWASYCGH HI SFLL+CGA IDQ T+KRKGGWCP Sbjct: 15 LGRDIEAHGPDTILYYARAGDLDGMMAMVQEDPSQANYQRIVTPLMWASYCGHAHIVSFLLECGAHIDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKRKGGWCP 125
BLAST of NO17G02280 vs. NCBI_GenBank
Match: EWM22011.1 (ankyrin repeat domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 93.2 bits (230), Expect = 2.700e-15 Identity = 68/218 (31.19%), Postives = 105/218 (48.17%), Query Frame = 0 Query: 31 ARAGNVEGVMAMVKTDPAQVNYQRIV--TPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRK--GGWCPXXXXXXXXXXXXXXXXXXXPL---------VEVDSRDDDGSTALYRA--------------ALWGCGAAVRELLRKGANPSLVGGGGLLPVAVARARGHAECVMVLENEERMFALAKAR 222 ++ G+V +++ DP+ + V +PLMWA+Y GH +AS L++ GA +D + R+ALY+A G+ +V +LLL HGA+P+ +R+ G C V++++ D+ GSTAL+ A A+ VR LL+ GA+P L G LP+A A GH C+ +L N ER + KAR Sbjct: 72 SKEGHVSMADGLLRQDPSLALCRDSVGQSPLMWAAYKGHAELASLLIKAGAPLDDHDCQSSRSALYMACEFGNWAVAALLLQHGADPSFRRQLYGRTCLQIAAYNNHAHVVQGVLHFAAFSSRGPGPCRVDINAVDNHGSTALHLAIRDDHLHPPFQATSAVLDISETVRILLQWGADPLLPDHTGGLPLAAAHRLGHKRCIALLANWERAALVHKAR 289
BLAST of NO17G02280 vs. NCBI_GenBank
Match: KXL46897.1 (hypothetical protein FE78DRAFT_145179 [Acidomyces richmondensis] >KYG46521.1 hypothetical protein M433DRAFT_64978 [Acidomyces richmondensis BFW]) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-8 Identity = 50/157 (31.85%), Postives = 73/157 (46.50%), Query Frame = 0 Query: 27 ILYYARAGNVEGVMAMVKTDP--AQVNYQRIVTPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGGWCPXXXXXXXXXXXXXXXXXXXPLVEVDSRDDDGSTALYRAALWGCGAAVRELLRKGAN 182 ++ AR G + + + + AQ ++ +T L WA+ GH + FL+Q GA ++ T + AS R H VVSLLL++GA+P I+ G+ P + VD D G T+L AA G GA V LLR GA+ Sbjct: 41 LMQLARLGELRSIQRLFDSGKYNAQTTDEQGITALHWAAINGHRALCHFLIQSGADVNARGGEAQATPVLWASKRCHLHVVSLLLANGADPLIRDDQGYNLLHSATLDGNVFQLVLLLHQPDIPVDVPDAHGHTSLMWAAYKGFGACVDILLRWGAD 197
BLAST of NO17G02280 vs. NCBI_GenBank
Match: XP_002678770.1 (predicted protein [Naegleria gruberi] >EFC46026.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8 Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 0 Query: 26 TILYYARAGNVEGVMAMVKTDPA-QVNY--QRIV----TPLMWASYCGHVHIASFLLQC-GASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGG 123 T+L +R G++ V ++++ +P+ VNY R V TPLMWA GHVHI ++LL G I++ +E GRTAL+ A+ R + + +LL HGA+ IK G Sbjct: 40 TLLEQSRRGDLNSVKSLLQNNPSLSVNYGDGRFVYYGMTPLMWACDSGHVHIVNYLLSVPGIEINRVDEITGRTALHYAAIRNYKEICEVLLRHGADKNIKTSLG 144
BLAST of NO17G02280 vs. NCBI_GenBank
Match: OTA37407.1 (hypothetical protein BTJ68_02218 [Hortaea werneckii EXF-2000]) HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8 Identity = 49/156 (31.41%), Postives = 72/156 (46.15%), Query Frame = 0 Query: 27 ILYYARAGNVEGVMAMVKTD--PAQVNYQRIVTPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGGWCPXXXXXXXXXXXXXXXXXXXPLVEVDSRDDDGSTALYRAALWGCGAAVRELLRKGA 181 ++ AR G + V + + A+ ++ +T L WA+ GH + L+Q GA ++ T + AS R H VV+LLL++GA+P +K G+ P + VD RD G T+L AA G GA V LLR GA Sbjct: 61 LMQLARLGELRSVQKLFDSGRYTAKSTDEQGITALHWAAINGHHALCHLLIQSGADVNARGGDAQATPVLWASKRCHLQVVALLLANGADPLMKDDQGYNLLHSATLDGNVFQLVLLLHQPDISVDVRDSQGHTSLMWAAYKGLGACVDVLLRWGA 216
BLAST of NO17G02280 vs. NCBI_GenBank
Match: OTA26146.1 (hypothetical protein BTJ68_11099 [Hortaea werneckii EXF-2000]) HSP 1 Score: 70.1 bits (170), Expect = 2.400e-8 Identity = 49/156 (31.41%), Postives = 72/156 (46.15%), Query Frame = 0 Query: 27 ILYYARAGNVEGVMAMVKTD--PAQVNYQRIVTPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGGWCPXXXXXXXXXXXXXXXXXXXPLVEVDSRDDDGSTALYRAALWGCGAAVRELLRKGA 181 ++ AR G + V + + A+ ++ +T L WA+ GH + L+Q GA ++ T + AS R H VV+LLL++GA+P +K G+ P + VD RD G T+L AA G GA V LLR GA Sbjct: 52 LMQLARLGELRSVQRLFDSGRYTAKSTDEQGITALHWAAINGHHALCHLLIQSGADVNARGGDAQATPVLWASKRCHLQVVALLLANGADPLMKDDQGYNLLHSATLDGNVFQLVLLLHQPDISVDVRDSQGHTSLMWAAYKGFGACVDVLLRWGA 207
BLAST of NO17G02280 vs. NCBI_GenBank
Match: PNS20140.1 (hypothetical protein CAC42_5590 [Elsinoe sp. CQ-2017a]) HSP 1 Score: 70.1 bits (170), Expect = 2.400e-8 Identity = 50/159 (31.45%), Postives = 70/159 (44.03%), Query Frame = 0 Query: 25 DTILYYARAGNVEGVMAMVKTDPAQVNY--QRIVTPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGGWCPXXXXXXXXXXXXXXXXXXXPLVEVDSRDDDGSTALYRAALWGCGAAVRELLRKGAN 182 + ++ AR G + G + + N ++ +T L WA+ GH + FLLQ GA+ + T + AS + VV+LLL HGA+P I G+ P + VDS D G T+L AA G A V LLR GAN Sbjct: 46 EDLMALARLGELRGTQKLFDSGKYNANSADEQGITALHWAAINGHYALCHFLLQAGANPNAKGGDAVATPVLWASRKCQLDVVNLLLEHGADPLITDDAGYNLLHCVTLDGNVFQLVLLLHQPDIPVDSPDSQGHTSLMWAAYKGFPACVDVLLRWGAN 204
BLAST of NO17G02280 vs. NCBI_GenBank
Match: PTQ48140.1 (hypothetical protein MARPO_0006s0167 [Marchantia polymorpha]) HSP 1 Score: 68.9 bits (167), Expect = 5.500e-8 Identity = 50/159 (31.45%), Postives = 73/159 (45.91%), Query Frame = 0 Query: 57 TPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIK----RKGG---WCPXXXXXXXXXXXXXXXXXXXPLVEVDSRDDDGSTALYRAALWGCGAAVRELLRKGANPSLVGGGGLLPVAVARARGHAECVMVL 209 TPLM AS+CGHV LL+ A +D E +G L+ A+ GH SVV ++ ++ + GG W P + VD++D++G T L A G AV+ LLRKGAN + L + VA ++G+ E + L Sbjct: 210 TPLMVASHCGHVKAVDILLEASARMDILNE-EGLNCLHAAASAGHTSVVERIVHKAGLLDMRFLNVKSGGDHEWTALHFAVASDRINVLELLLGYPDIVVDTKDNEGCTPLLLATSLGYVQAVKILLRKGANTQIKNDKELNSMHVAASQGYIEVLKAL 367
BLAST of NO17G02280 vs. NCBI_GenBank
Match: NP_001072865.1 (ankyrin repeat domain-containing protein 55 [Xenopus tropicalis] >AAI23932.1 ankyrin repeat domain 55 [Xenopus tropicalis]) HSP 1 Score: 68.6 bits (166), Expect = 7.100e-8 Identity = 58/192 (30.21%), Postives = 94/192 (48.96%), Query Frame = 0 Query: 26 TILYYARA-GNVEGVMAMVKTDPAQVNY--QRIVTPLMWASYCGHVHIASFLLQCGASIDQTEEGKGRTALYLASGRGHASVVSLLLSHGANPTIKRKGGWCP-XXXXXXXXXXXXXXXXXXXPLVEVDSRDDDGSTALYRAALWGCGAAVRELLRKGANPSLVGGGGLLPVAVARARGH-AECVMVLENEE 213 T++Y A A G+V + A+++ DP+ + Y TPLM A V LL+ GA+I+ T++ GRT+L +A+ G LL +GA I K G P L E++ +D++G T+L+ AA + LL+KGA+P+LV P+ A G+ C ++L+N++ Sbjct: 22 TVVYQASANGDVNTLTAIIREDPSILEYCDNEGCTPLMHAVSGRQVDTVKLLLKMGANIN-TQDACGRTSLSVATYLGWLEGCVSLLRNGAKQNIPDKNGRLPLHAATAEPDARLLAVLLQQSTLSEINHQDNEGMTSLHWAAFHNRPQHAQALLQKGADPTLVDKDFKTPLHWAVQSGNRILCSIILDNQQ 212 The following BLAST results are available for this feature:
BLAST of NO17G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02280 ID=NO17G02280|Name=NO17G02280|organism=Nannochloropsis oceanica|type=gene|length=4181bpback to top protein sequence of NO17G02280.1 >NO17G02280.1-protein ID=NO17G02280.1-protein|Name=NO17G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=551bpback to top Synonyms
Publications
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