NO17G02180, NO17G02180 (gene) Nannochloropsis oceanica

Overview
NameNO17G02180
Unique NameNO17G02180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1758
Alignment locationchr17:632615..634372 -

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Properties
Property NameValue
DescriptionMitochondrial rna splicing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:632615..634372 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002523MgTranspt_CorA/ZnTranspt_ZntB
Homology
BLAST of NO17G02180 vs. NCBI_GenBank
Match: EWM24191.1 (mitochondrial rna splicing protein [Nannochloropsis gaditana])

HSP 1 Score: 678.7 bits (1750), Expect = 1.600e-191
Identity = 373/539 (69.20%), Postives = 444/539 (82.37%), Query Frame = 0
Query:   45 LGQRRGIMMEKGKQGNLYG----NNTKLQQRTSLSPYEILATKLGRFDRSMQALQVDAKGEVTTRTTSIKELLLNTEMHVRDLIALSPDALHKRGGRLTPVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDSQGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFARGHGKDRMRKDLQSVAAYQSIFKHIRSVSQAIYQTGVDPTDVDMSDSKEFRAYFKKLLTDYRHYDVSWQEVDVLLEVIRTSAEQLRQQKLHSDETSEEKIYMKLFESLAAQDIENSNANLDGKDVPGAAGRTAAXXXXXXXKTTPP 580
            LG R   +  KG+ G  +        +  QRTSLSPYEI+ATKLGRFDR +QALQVDA+GEV+T TTSIKELLL+T+MHVRDLIALSP+AL KRGGRLTP ILPR DVI+FVMHPLRLVISK+SCLAFDP DPTVQSVIADISSAIKIQ L++ HLAK+     S +  Y +SYELVV+EQALRSFCNQFSRIKELL LIVET LK LVDSQGSDQEEQL++LVPLKDGL+VA  NMQE V V+Q+LV+ +EDMLAMLL+EKA ++K     S+Q   LD  LHS+VELLLENYLR+L L GQQIK+LQARVQSAQEVF+INVDLMRNRVLR+TLLLT++STSLASAAT+GAFFGMNV+LP SL+T+PEAF +IT+G++ LGAGLFALA AFARGHGKDR+R+DLQSVAA+QSIFKHIRSVSQAIYQT +DP +V M  +KE RAYF+K+L+ +R+Y+VSW+EVDVL++V+  SA+Q RQQ+ +SDETSE  IY KLFESLAAQ+ + ++ + D +    AAGR A        +  PP
Sbjct:   44 LGLRFIRIGRKGEDGPHFSTQKDETKRAPQRTSLSPYEIVATKLGRFDRQLQALQVDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGGRLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNG--SVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQETSGDEDLE----AAGREARDRVAEARRERPP 576          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: XP_005855761.1 (magnesium ion transporter mrs2 [Nannochloropsis gaditana CCMP526] >EKU20602.1 magnesium ion transporter mrs2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 365.9 bits (938), Expect = 2.300e-97
Identity = 200/303 (66.01%), Postives = 248/303 (81.85%), Query Frame = 0
Query:  277 MQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFARGHGKDRMRKDLQSVAAYQSIFKHIRSVSQAIYQTGVDPTDVDMSDSKEFRAYFKKLLTDYRHYDVSWQEVDVLLEVIRTSAEQLRQQKLHSDETSEEKIYMKLFESLAAQDIENSNANLDGKDVPGAAGRTAAXXXXXXXKTTPP 580
            MQE V V+Q+LV+ +EDMLAMLL+EKA ++K     S+Q   LD  LHS+VELLLENYLR+L L GQQIK+LQARVQSAQEVF+INVDLMRNRVLR+TLLLT++STSLASAAT+GAFFGMNV+LP SL+T+PEAF +IT+G++ LGAGLFALA AFARGHGKDR+R+DLQSVAA+QSIFKHIRSVSQAIYQT +DP +V M  +KE RAYF+K+L+ +R+Y+VSW+EVDVL++V+  SA+Q RQQ+ +SDETSE  IY KLFESLAAQ+ + +  + D +    AAGR A        +  PP
Sbjct:    1 MQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQETPGDEDFE----AAGREARDRVAEARRERPP 299          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: CEO95304.1 (hypothetical protein PBRA_004070 [Plasmodiophora brassicae])

HSP 1 Score: 119.0 bits (297), Expect = 4.900e-23
Identity = 109/422 (25.83%), Postives = 198/422 (46.92%), Query Frame = 0
Query:   89 RSMQALQVDAKGEVTTRTTSIKELLLNTEMHVRDLIALSPDALHKRGGRLTPVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDSQGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFARGHGKDRMRKDLQSVAAYQSIFKHIRSVSQAIYQTGVDPTDVDMSDSKEFRAYFKKLLTDYRHYDVSWQEVDVLLEV 511
            R    L+  A GE T    S+++LL  + ++ RDL+ L  D  H   G    VILPR D ++ V   ++ ++ +D  + FD    T+ +                   A +    L++     +++EL  VE  L   C +  R   L   +++  L +L D    + E  L +L+ +K+ L+    + QE    + +L+N++EDM  M L+ ++ +           + +D + H +VEL++E+YLRQ++ + Q    L+  ++SAQE+  IN+   RNR++++ L + + S SLA++A + + FGMN  LP   + +P AF  +    + +   ++A    +A   G  R  + +  V +  S+  +I  V Q +     D   +D       R  F+ LL       V  +E  +L +V
Sbjct:   62 REFDVLRFKADGEFTKEKVSVEDLLKVSGIYARDLLLL--DTSH---GNPHSVILPRGDSLL-VNFFVKAIVYRDRAIIFDANKSTIVA------------------FANSFKTYLTSASDKRLAFELRAVEGILSLGCERHYRRLSLYGPVIQALLNQLTDQ--LEGEAILRRLLAVKNSLSSFEVDSQEYKTTMTDLLNNDEDMANMNLTLRSQLAPG--------ETVDRSEHQDVELMIESYLRQMTEMYQHAYYLRKSIESAQEILNINLSSHRNRMIKMDLQMAMGSVSLAASAVIASTFGMN--LPSGFEASPTAFWAMATSIIVIAPIIYAACHRYA--EGSPRSSQYVMEVKSIDSLLANISEVEQVLVNHACDDVGID-------REQFRALLQLETGRAVRAEEAQMLFDV 438          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: OAO16308.1 (mitochondrial magnesium transporter Mrs2p [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 107.5 bits (267), Expect = 1.500e-19
Identity = 107/441 (24.26%), Postives = 196/441 (44.44%), Query Frame = 0
Query:   88 DRSMQALQVDAKGEVTTRTTSIKELLLNTEMHVRDLIALSPDALHKRGGRLTPVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDSQGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDP-TLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFARGHGKDRMRKDLQSVAAYQSIFKHIRSVS--QAIYQTGVDPTDVDMSDSKEFRAYFKKLLTDYRHYDVSWQEVDVLLEVIRTSAEQLRQQKLHS 526
            D   ++ ++ A GE+  +  S+  L+    +H RD +A+ P        R TP IL R   I+  ++ +R +IS +S + F+  +P +  +  DI+  I+I+  +       E  AL  +        L++    L +  + +  +            K L  +      +   ++ PLK  L     N +     IQ++++S+EDML +LL++K           N++  L P  +H  VELLLENY R+ + I +Q  +    ++  Q++ AI++D  RN++L + L L +   S+A    + + FGMN      L +  E   Y+  G  GL A   A+  +F +   +   +  L+   A + +    R +     I+   +  T     DS     +F K+       ++S +E D L E+I +S   + + K+ S
Sbjct:   69 DSLFKSYEIYANGEIVQKMCSMPSLMTEYALHGRDFLAIHPGT-----HRTTPCILARQKAILVNLNSIRSIISDESMIIFNIDNPFISKISRDIADYIRIESRRFGGSFPFELQALEGV--------LILYSDHLYNKLDSYQHMAH----------KLLYTTDNYTNFDVYQEIHPLKVRLGHLQDNSEAIAKCIQDIISSDEDMLELLLTQK-----------NKLGHLPPMEMHLSVELLLENYFRRYTDIARQCDMHLEDIEGKQQLAAISMDNYRNKILNLNLSLGIAEVSIALGTFLTSVFGMN------LHSGLETANYMFYGMAGLAACSCAMLYSFFQLRNRTMRKTPLKRETAAKYLSNLFRGIDNFDTIFMDYMSNTFASDQDSIRMTDFF-KIANSILRRELSQEEKDKLYELIPSSNGMVEKVKILS 468          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: XP_012758407.1 (hypothetical protein SAMD00019534_009860 [Acytostelium subglobosum LB1] >GAM17811.1 hypothetical protein SAMD00019534_009860 [Acytostelium subglobosum LB1])

HSP 1 Score: 105.5 bits (262), Expect = 5.600e-19
Identity = 93/348 (26.72%), Postives = 162/348 (46.55%), Query Frame = 0
Query:   89 RSMQALQVDAKGEVTTRTTSIKELLLNTEMHVRDLIALSPDALHKRGGRLTPVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDSQGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFARGH 437
            RS + L+VD  G +  +      L +  ++  RDL  +      +      P IL R+ V I  +  +R ++  D  + FDPQ+P +++ +  I      ++L   +L  TE        T  + +E  V+E  L   C + +   + +  ++  EL+ L ++   + E     L+  K GL       +E +D +  L+ S+EDM  M LS +++       + NQ        H E+E+LLENY+RQL  I  +I  L+  + S +E     +D  RN+++R+ L L++V+ S    + +  FFGMN  L    +  P +F Y++ G L  G  +FA    +   H
Sbjct:  123 RSFKVLEVDLSGNLIDQIIFKNNLSIEMKLQARDLRTIDSSFPPQ-----MPAILARDKVFIVSIGYIRAIVQHDKIIFFDPQNPLIRNDLVPILR----EYLGNQNLFFTE--------TLTLPFEFKVLEAMLVFICKKLTAEHQRICTLIAKELESLNENPEHNLEN---LLLFHKKGLNQFEVTTKEIMDALSRLLESDEDMALMYLSFRSITGGTR--KRNQ--------HEELEILLENYMRQLEQISNEISQLKETLSSTEEFVNFQLDTARNKMMRMNLTLSLVTMSAGMGSMVTGFFGMN--LMNGFEHAPFSFFYVSGGVLLGGLSVFAYVKWYCHKH 438          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: OEU20653.1 (hypothetical protein FRACYDRAFT_180192 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-16
Identity = 109/451 (24.17%), Postives = 193/451 (42.79%), Query Frame = 0
Query:   96 VDAKGEVTTRTTSIKELLLNTEMHVRDLIALSPDALHKRGG-----------RLTPVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDSQGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQC-LDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFARGHGKDRMRKDLQSVAAYQSIFKHIRSVSQAIYQTGVDPTDVD------MSDSKEFRAYFKKLLTDYRHYDV-SWQEVDVLLEVIRTSAEQLRQQKLHSDE 528
            + A GE+ T      E++  T M  RD + L   + ++R             R  P I+ RND I+  + P+R V  KD C  FD      +S I  +S      + +++   K++   L              +E  L      F+    +   IV   L  +   +       L ++ PLK+ L      + +  D + +++N +E ML +LL+E+        G++      +D   H  VE +L  Y R+ S + Q++  L  R++S QE   + +DL RNR++++ + L +++T+      +   FGMN+ + G  D+N  AF+     A+  G+ + AL+ A          RK +   A  +   + I  + Q +Y    D + +D      M   +  R  FK  L   RH    S +E+D+L  V+ T  +    +K  +D+
Sbjct:  117 ITATGEIETTFLHPSEIMAETTMSPRDFVLLRLTSWNERTENWVGKTLIEQMRHPPTIMARNDFILLTLGPVRAVCEKDVCYFFDVHSEAAKSFIKGLSRV----YQERSARIKSKNRDL-------------FLETVLSDTVGSFTGRVRIFEPIVNDLLHRISVDEDFSDANLLHQMAPLKEQLQSFEVYVTQAYDCLTQILNDDEVMLQLLLTEQ--------GEACTANVPVDFERHQHVEHVLGIYARRFSSVIQEVNYLLGRIESKQEFIELELDLFRNRLIKMNVDLAILATATGITTALTGSFGMNM-VNGFEDSN-TAFI-----AVAAGSAISALSVA-------HYFRKMVSGAAIQKRAEQRIDEI-QTMYNALSDMSALDCAVKEMMKGKRMCREEFKNQLATARHSKTCSDKEIDLLFNVLNTHEDDFLDEKDFADK 527          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: XP_005536254.1 (similar to mitochondrial magnesium transporter Mrs2p [Cyanidioschyzon merolae strain 10D] >BAM79968.1 similar to mitochondrial magnesium transporter Mrs2p [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 94.4 bits (233), Expect = 1.300e-15
Identity = 89/350 (25.43%), Postives = 153/350 (43.71%), Query Frame = 0
Query:  112 LLLNTEMHVRDLIALSPDALHKRGGRLTPVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELV--DSQGSDQEE-------------------------QLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFAR 435
            L     + +RDL  + P   ++      PV+L R   I+  +  +R V+  D    FDP+ P V++ +  + + + +   +                   + +EL  +E  L   CN   R    L   +E+ L+ L   D  G+                              L +L+  K+ L    +   +  + + E++ S+EDM  M LS KA  E  H  + +Q        H EVE++ ENYL+Q+  +  +I      +QS ++   I +D +RNR+LR+ L+L + S SL+S A + A FGMN  L  +L+ +  AF+ +T G +G+   +F    A+ R
Sbjct:  153 LAARLRLPLRDLRVVDPAFRNE-----APVVLARQSAIVIHLEHIRAVVEADRVTLFDPEQPAVEAFLPQLHARLALSSPRPA-----------------LPFELRALESILVDVCNSLMREMRYLVPGIESLLRALSSDDVAGAXXXXXXXXXXXXXXXXXXGDASSIPPDVIMLDRLLGAKNKLNELQNRATQLRNALNEVLLSDEDMSEMYLSTKA--ESGHRRRVDQ--------HEEVEMMFENYLKQIDSLVSEIASRTQAIQSTEDFVQIKLDALRNRILRLDLVLKLGSVSLSSGALVAAIFGMN--LHSTLEESQLAFLSVTGGLVGISGLVFLGGAAYCR 468          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: XP_005536344.1 (similar to mitochondrial magnesium transporter Mrs2p [Cyanidioschyzon merolae strain 10D] >BAM80058.1 similar to mitochondrial magnesium transporter Mrs2p [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 93.2 bits (230), Expect = 2.900e-15
Identity = 82/264 (31.06%), Postives = 126/264 (47.73%), Query Frame = 0
Query:  140 PVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDS-QGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPT-LHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLP 402
            PVIL R  VII  +  LR VI  D  L F+P D +V+     I   +                A  +    E+ +EL  +E  L   C    R    +   +   L EL     G   EE L+    LK  L+   S +    D +Q+L++ +EDM  M L+E   M K+ D +        PT  H++VE LLE+YLR L  +  + ++L A +   + +  + +D MRNR+LR+++L+TV++   A A  +  FF MN++LP
Sbjct:  338 PVILVRRHVIIVSLAHLRAVIFADHMLLFNPNDQSVRQSARSIEERL---------------IAAQSDEEQEIPFELHALESVLIEVCVALERDLACIEPSLTRLLNELTHKISGRKLEEMLY----LKQMLSNFSSRVDGVRDALQDLLSEDEDMARMYLTE---MRKHPDTER-------PTKAHTQVEELLESYLRVLDYLAGRARLLGATIDDTEGLVDLQLDSMRNRLLRISVLMTVLTCVFAGAGVVNRFFSMNLQLP 572          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: OSX77355.1 (hypothetical protein BU14_0152s0050 [Porphyra umbilicalis])

HSP 1 Score: 91.7 bits (226), Expect = 8.400e-15
Identity = 86/344 (25.00%), Postives = 165/344 (47.97%), Query Frame = 0
Query:   91 MQALQVDAKGEVTTRTTSIKELLLNTEMHVRDLIALSPDALHKRGGRLTPVILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDSQGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGAGLFALATAFAR 435
            + AL++   G V+ R     ++     +++RDL  + P   ++     +PV+L R   ++  +  +R++++    L FDP  P V    A ++  ++ + +   H    E  AL A+        LV V   +R+   +  R+K  +   ++   K+  +  G    E L +L+PL+ GL     ++      + E++ S+EDM  M LS K+       G+   +       H E+E+++E YL+Q+  +  ++  L   V++ + V  I +D  RNR+LR+ + L + + S+ASAA     FGMN  L    + +P AF  +++ ++G+ A +F     + R
Sbjct:   62 LAALEILPNGAVSARHVQKADVAAELSLNLRDLRVVDPTFRNE-----SPVVLARPTAMVIHLLHVRILVTASRVLLFDPHHPAV----AALTPRLRARLIDAAHPLPFEMRALEAV--------LVDVCCGIRA---EVGRLKPKVQAALDVMSKD-GEFGGRGVTEGLDQLLPLEMGLNELTGSVGMVRTALNEVLMSDEDMSDMYLSWKSA-----TGEERGVD-----EHDEIEMMVEGYLKQVDAVAYELGRLLRAVKTTENVTQIRLDASRNRILRLEVFLNLGAVSVASAACFAGLFGMN--LLSGWEEDPHAFWMVSVMSVGVAAIVFRSVIVWLR 372          
BLAST of NO17G02180 vs. NCBI_GenBank
Match: XP_005834244.1 (hypothetical protein GUITHDRAFT_137462 [Guillardia theta CCMP2712] >EKX47264.1 hypothetical protein GUITHDRAFT_137462 [Guillardia theta CCMP2712])

HSP 1 Score: 91.3 bits (225), Expect = 1.100e-14
Identity = 92/391 (23.53%), Postives = 183/391 (46.80%), Query Frame = 0
Query:  142 ILPRNDVIIFVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTEGAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVDSQGSD-QEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLSEKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQARVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKLPGSLDTNPEAFMYITIGALGLGA-GLFALA---TAFARGHGKDRMRKDLQSVAAYQSIFKHIRSVSQAIYQTGVDPTDVDMSDSKEFRAYFKKLLTDY--RHYD-------VSWQEVDVLLEVIRTSAEQL 519
            I+P  ++++F    L+ ++  D  + FD   P+VQ+    + ++I+   L Q  L +               +ELVV+E  L      +      L  ++   L ++   QG D +E+ L+KL+PL+  ++     +      + +L+ ++EDM A  L+ +            Q +   P  H +VEL++E Y  ++  +  +I  +  +++S + VFA+++D  RNR+ R+ L LT+ + SL+ +  +  FFGMN+      + +P    +  +G   +G+  +F L     A  R    +RMR        ++S+ +++  V   + +   D +   +   K  +   KK+L+    + +D       VS +EVD+L E++ T+ + L
Sbjct:  181 IIPYENMVVFKFEHLKGLLFWDRIMVFDADMPSVQAFTLTLRASIRRNELIQERLKQ--------------PFELVVLECLLDELAVYYESSFSRLYYLINLHLDKITSGQGDDVREDGLYKLLPLEHRMSSLQVRLDRAFKTLDQLLATDEDMAACYLTFR----------HEQGEPAPPDEHMQVELIMETYRTRMEDLLDRIAEVFRQIESTRTVFALSLDNTRNRIARMDLSLTMGAVSLSFSMAIAGFFGMNI--THGYEHHPPLVFWSVMGLGVVGSMAIFHLCRKQLASMRSTQNNRMR----DFRVFKSVLENLDQV-HYLLRRDTDLSHRIVKGGKLTKDELKKMLSSIPDKQHDAIVGAGAVSKEEVDLLYEILNTNKDGL 540          
The following BLAST results are available for this feature:
BLAST of NO17G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24191.11.600e-19169.20mitochondrial rna splicing protein [Nannochloropsi... [more]
XP_005855761.12.300e-9766.01magnesium ion transporter mrs2 [Nannochloropsis ga... [more]
CEO95304.14.900e-2325.83hypothetical protein PBRA_004070 [Plasmodiophora b... [more]
OAO16308.11.500e-1924.26mitochondrial magnesium transporter Mrs2p [Blastoc... [more]
XP_012758407.15.600e-1926.72hypothetical protein SAMD00019534_009860 [Acytoste... [more]
OEU20653.13.400e-1624.17hypothetical protein FRACYDRAFT_180192 [Fragilario... [more]
XP_005536254.11.300e-1525.43similar to mitochondrial magnesium transporter Mrs... [more]
XP_005536344.12.900e-1531.06similar to mitochondrial magnesium transporter Mrs... [more]
OSX77355.18.400e-1525.00hypothetical protein BU14_0152s0050 [Porphyra umbi... [more]
XP_005834244.11.100e-1423.53hypothetical protein GUITHDRAFT_137462 [Guillardia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003002NSK003002Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02180.1NO17G02180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599601gene_7669Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100325g4gene6278Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02180.1NO17G02180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02180 ID=NO17G02180|Name=NO17G02180|organism=Nannochloropsis oceanica|type=gene|length=1758bp
ATGCGCCGTCTCCTCCGGCCCTGCCAGCGGCAAGCCTGGCGTCAGCCCTC
CACTTTCGCCGCTCACCGTGGCAGTCCATTGGCCACTTTTAGCCTCTGCG
GTCCAACGTCTTCCCTTACATTTCGCGGTGGCCTCGGCCAGCGGCGGGGC
ATCATGATGGAAAAAGGCAAGCAGGGCAATCTGTACGGCAACAACACCAA
ACTGCAGCAACGCACGTCGCTCTCCCCATACGAGATTTTGGCCACCAAGC
TCGGCCGCTTCGACCGAAGCATGCAAGCCTTGCAAGTGGACGCAAAGGGA
GAAGTTACGACGCGGACGACCTCTATAAAGGAACTCTTGCTCAACACTGA
AATGCACGTACGGGACCTTATTGCGCTCTCGCCCGACGCCCTTCACAAGC
GCGGCGGTCGCCTCACACCTGTCATTCTCCCACGCAATGACGTCATCATC
TTTGTCATGCATCCCCTGCGGCTTGTCATTTCGAAAGATAGTTGCTTAGC
TTTTGACCCACAAGACCCGACCGTCCAATCCGTAATTGCTGATATATCCA
GCGCAATAAAAATCCAGCACTTGCAGCAAACGCACTTGGCCAAGACCGAG
GGTGCTGCCTTGTCTGCAATTGGGACTTACGAAGTCTCGTACGAGCTAGT
TGTGGTGGAACAGGCCTTACGGAGTTTCTGTAACCAGTTTAGCCGGATCA
AGGAACTTCTGACGCTGATCGTCGAGACGGAGCTCAAGGAGCTAGTGGAT
TCGCAAGGTTCCGACCAAGAAGAGCAATTGTTCAAGCTGGTCCCATTGAA
AGATGGTCTGGCCGTTGCGTACAGCAATATGCAGGAAACCGTCGACGTGA
TTCAGGAGTTGGTCAATTCTGAAGAGGATATGTTGGCGATGCTGTTGTCT
GAAAAAGCCATGATGGAGAAGAATCATGATGGGCAATCGAACCAAATTCA
GTGCCTGGACCCGACCCTGCATTCGGAAGTAGAGCTCCTCCTCGAGAACT
ATCTCCGACAATTGTCTTTGATCGGACAGCAGATCAAGATTCTCCAGGCG
CGGGTTCAGAGCGCTCAGGAGGTGTTCGCGATTAATGTCGATCTTATGAG
GAATCGCGTGTTGCGCGTTACCCTTCTGTTGACAGTGGTCAGTACCAGTT
TAGCATCTGCAGCCACAATGGGTGCATTCTTTGGCATGAATGTCAAATTG
CCTGGCTCGCTCGACACGAATCCTGAGGCCTTCATGTACATAACCATCGG
GGCCTTGGGACTGGGCGCAGGGCTTTTTGCCCTTGCTACTGCCTTTGCAC
GCGGGCACGGAAAGGACCGAATGCGCAAAGACTTGCAGAGTGTTGCAGCT
TATCAATCTATTTTCAAACATATTCGCTCCGTCTCCCAGGCCATTTATCA
AACCGGCGTCGACCCTACGGATGTGGACATGAGCGATTCTAAGGAGTTTC
GTGCGTATTTTAAGAAGCTTTTGACTGATTATCGACATTACGATGTGTCC
TGGCAGGAAGTGGACGTGTTGCTAGAAGTAATTCGAACCTCGGCGGAGCA
GCTTCGACAACAGAAGCTCCACAGCGACGAGACGAGTGAGGAGAAAATTT
ACATGAAGCTTTTTGAATCCTTGGCCGCCCAAGACATAGAAAATTCGAAC
GCAAACTTGGATGGCAAAGATGTGCCTGGTGCGGCCGGTAGGACCGCTGC
GGGAGGAAATGTCGCTGGAGGAAAGACAACACCACCTTCGCATTCGTCAC
CATCATAG
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protein sequence of NO17G02180.1

>NO17G02180.1-protein ID=NO17G02180.1-protein|Name=NO17G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=586bp
MRRLLRPCQRQAWRQPSTFAAHRGSPLATFSLCGPTSSLTFRGGLGQRRG
IMMEKGKQGNLYGNNTKLQQRTSLSPYEILATKLGRFDRSMQALQVDAKG
EVTTRTTSIKELLLNTEMHVRDLIALSPDALHKRGGRLTPVILPRNDVII
FVMHPLRLVISKDSCLAFDPQDPTVQSVIADISSAIKIQHLQQTHLAKTE
GAALSAIGTYEVSYELVVVEQALRSFCNQFSRIKELLTLIVETELKELVD
SQGSDQEEQLFKLVPLKDGLAVAYSNMQETVDVIQELVNSEEDMLAMLLS
EKAMMEKNHDGQSNQIQCLDPTLHSEVELLLENYLRQLSLIGQQIKILQA
RVQSAQEVFAINVDLMRNRVLRVTLLLTVVSTSLASAATMGAFFGMNVKL
PGSLDTNPEAFMYITIGALGLGAGLFALATAFARGHGKDRMRKDLQSVAA
YQSIFKHIRSVSQAIYQTGVDPTDVDMSDSKEFRAYFKKLLTDYRHYDVS
WQEVDVLLEVIRTSAEQLRQQKLHSDETSEEKIYMKLFESLAAQDIENSN
ANLDGKDVPGAAGRTAAGGNVAGGKTTPPSHSSPS*
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Synonyms
Publications