NO17G02170, NO17G02170 (gene) Nannochloropsis oceanica

Overview
NameNO17G02170
Unique NameNO17G02170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4465
Alignment locationchr17:629958..634422 +

Link to JBrowse

Properties
Property NameValue
DescriptionGamma-butyrobetaine dioxygenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:629958..634422 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR003819Taurine_dOase
Homology
BLAST of NO17G02170 vs. NCBI_GenBank
Match: XP_005855754.1 (gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana CCMP526] >EKU20595.1 gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 601.3 bits (1549), Expect = 2.100e-168
Identity = 282/349 (80.80%), Postives = 310/349 (88.83%), Query Frame = 0
Query:    1 MSSSLAGENASTPSSSSPTTPHELFKVTWKDGFSHAFPSAWLRQHCFETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDEFGCCLRKNGITPLGIVRAQGG 350
            +S+  AG     PSS +     E  +VTWKDGFSHAFPSAWLRQHC+ETRQ+H V PR+WGRDLVSYFPG+VLPT+ +SDVVKVAAG +AGW+ +A GFVQW+ HLRDYGVAL+E VPT PGTVM+MADLIAYHRKTHYG+SFQVVSARKP+HLAYTPVELEVHTDLNYRESSPGIQLLHCLA+DA GGESTFVDGF  AETLRRES ED+ TLCEVPIPF VKDG GF Y+KIPTIC+DDAG+LVE+HFNERTRGPLELPAA M RVYRALAHFQ IACRP+LCVEVKMKAGDMVAFNNRRILHGRKAFDPRTG+RHLEGTYVDMDEF  CLRK+G+TPL IVRAQ G
Sbjct:   99 LSACAAGPAKGQPSSGASA---EFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEG 444          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: EWM24190.1 (gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana])

HSP 1 Score: 601.3 bits (1549), Expect = 2.100e-168
Identity = 282/349 (80.80%), Postives = 310/349 (88.83%), Query Frame = 0
Query:    1 MSSSLAGENASTPSSSSPTTPHELFKVTWKDGFSHAFPSAWLRQHCFETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDEFGCCLRKNGITPLGIVRAQGG 350
            +S+  AG     PSS +     E  +VTWKDGFSHAFPSAWLRQHC+ETRQ+H V PR+WGRDLVSYFPG+VLPT+ +SDVVKVAAG +AGW+ +A GFVQW+ HLRDYGVAL+E VPT PGTVM+MADLIAYHRKTHYG+SFQVVSARKP+HLAYTPVELEVHTDLNYRESSPGIQLLHCLA+DA GGESTFVDGF  AETLRRES ED+ TLCEVPIPF VKDG GF Y+KIPTIC+DDAG+LVE+HFNERTRGPLELPAA M RVYRALAHFQ IACRP+LCVEVKMKAGDMVAFNNRRILHGRKAFDPRTG+RHLEGTYVDMDEF  CLRK+G+TPL IVRAQ G
Sbjct:  145 LSACAAGPAKGQPSSGASA---EFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEG 490          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_095600255.1 (gamma-butyrobetaine dioxygenase [Pseudomonas sp. PIC25] >PAU59692.1 gamma-butyrobetaine dioxygenase [Pseudomonas sp. PIC25])

HSP 1 Score: 241.5 bits (615), Expect = 4.200e-60
Identity = 123/308 (39.94%), Postives = 164/308 (53.25%), Query Frame = 0
Query:   26 KVTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            +V W+DG    F   WLR H +     E R     + R+W   L  + P      +   D                   + W+  LRD G+ LV+G+PT PGT+  +A  IA+ R++++G  F V S       AYT   L +HTDL  RE  PG+Q LHCL +DA GG+S FVDGF  AE LRRE+P+DF TLCEVP+ F+ KD       + P I +D  G + E+      RGP + PA  M  +YRA  HF  +   P   VE +++AG M  F+NRR LH R AFDP +G RH +G Y+D DE
Sbjct:   94 RVDWQDGHVSRFHPGWLRAHAYDDLSREERLRERPRSRIWAAGLNEHLPVFDYAVVMEDD----------------RALLDWLRALRDTGLTLVQGMPTEPGTLQHIARRIAFIRESNFGVLFNVQSRADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAVGGDSLFVDGFAIAEALRREAPDDFRTLCEVPVEFRNKDRHSDYRCRAPIIALDTFGAVTEIRIANFLRGPFDAPARQMPALYRAYRHFIALTREPRFRVERRLEAGQMWCFDNRRTLHARHAFDPSSGTRHFQGCYIDRDE 385          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_095647209.1 (gamma-butyrobetaine dioxygenase [Pseudomonas indica] >PAU63260.1 gamma-butyrobetaine dioxygenase [Pseudomonas indica])

HSP 1 Score: 235.0 bits (598), Expect = 3.900e-58
Identity = 125/308 (40.58%), Postives = 165/308 (53.57%), Query Frame = 0
Query:   26 KVTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            +V W DG    +   WLR H +     E R     + RLW   L  +     LP   ++ V+K                + W+  LRD G+  V+G+PT PGT+  +A  IA+ R++++G  F V S       AYT   L +HTDL  RE  PG+Q LHCL +DA GG+S FVDGF  AE LRRE+PEDF TLCE+P+ F+ KD         P I +D  G + E+      RGP + PA  M  +YRA  HF  +   P   VE +++AG M  F+NRR LH R AFDP +G RH +G YVD DE
Sbjct:   94 RVDWPDGHVSRYHPGWLRAHAYDDLSREERLRERPRSRLWATGLNEH-----LPVFDYAAVMK-----------DDRTLLDWLRALRDTGLTQVQGMPTEPGTLQHIARRIAFIRESNFGVLFNVQSRADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAVGGDSLFVDGFAIAEALRREAPEDFRTLCELPVEFRNKDRHSDYRCLAPIIALDAHGAVTEIRIANFLRGPFDAPARQMPALYRAYRHFIALTREPRFRVERRLEAGQMWCFDNRRTLHARHAFDPSSGARHFQGCYVDRDE 385          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_084336089.1 (gamma-butyrobetaine dioxygenase [Pseudomonas indica] >SDL68386.1 gamma-butyrobetaine dioxygenase [Pseudomonas indica])

HSP 1 Score: 234.2 bits (596), Expect = 6.700e-58
Identity = 125/308 (40.58%), Postives = 164/308 (53.25%), Query Frame = 0
Query:   26 KVTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            +V W DG    +   WLR H +     E R     + RLW   L  +     LP   ++ V+K                + W+  LRD G+  V+G+PT PGT+  +A  IA+ R++++G  F V S       AYT   L +HTDL  RE  PG+Q LHCL +DA GG+S FVDGF  AE LRRE+PEDF TLCE+P+ F+ KD         P I +D  G + E+      RGP   PA  M  +YRA  HF  +   P   VE +++AG M  F+NRR LH R AFDP +G RH +G YVD DE
Sbjct:   94 RVDWPDGHVSRYHPGWLRAHAYDDLSREERLRERPRSRLWATGLNEH-----LPVFDYAAVMK-----------DDRTLLDWLRALRDTGLTQVQGMPTEPGTLQHIARRIAFIRESNFGVLFNVQSRADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAVGGDSLFVDGFAIAEALRREAPEDFRTLCELPVEFRNKDRHSDYRCLAPIIALDAHGAVTEIRIANFLRGPFNAPARQMPALYRAYRHFIALTREPRFRVERRLEAGQMWCFDNRRTLHARHAFDPSSGARHFQGCYVDRDE 385          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_017521457.1 (gamma-butyrobetaine dioxygenase [Pseudomonas nitroreducens])

HSP 1 Score: 231.9 bits (590), Expect = 3.300e-57
Identity = 123/308 (39.94%), Postives = 169/308 (54.87%), Query Frame = 0
Query:   27 VTWKDGFSHAFPSAWLRQHCFE-----TRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVS-ARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            V W+DG    F   WLR H ++      R   H   R+W RD         +P   H  +++  +             ++W+  LRD G++ V+GVPT PG++ R+A  IA+ R+T++G  F V S A      AYT   L +HTDL  RE  PG+Q LHCL +DA+GG+S FVDGF  A+ LR E+PEDF TLCE+PI F+ KD         P I +D  G++ E+      RGP + PA  M  +Y A   F  +   P   ++ K++AG M  F+NRR LH R AFDP +G RHL+G Y+D DE
Sbjct:   91 VDWQDGHRSRFDPGWLRAHAYDDESRAERLAAHQTTRVWRRDF-------EVPVFQHDRLLEDDS-----------ALLEWMLALRDLGLSRVDGVPTAPGSLHRIAQRIAFIRETNFGVLFDVKSKAAAADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAEGGDSVFVDGFAIAQALRDEAPEDFRTLCEMPIEFRNKDRRSDYRCLAPVIALDARGEISEIRIANFLRGPFDAPAEHMDALYHAWRAFLTLTRDPRFRLQQKLRAGQMWCFDNRRTLHARTAFDPASGERHLQGCYIDRDE 380          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: PJI46217.1 (gamma-butyrobetaine dioxygenase [Pseudomonas sp.])

HSP 1 Score: 231.5 bits (589), Expect = 4.300e-57
Identity = 121/308 (39.29%), Postives = 169/308 (54.87%), Query Frame = 0
Query:   27 VTWKDGFSHAFPSAWLRQHCFE-----TRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVS-ARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            + W+DG    F   WLR H ++      R   H   R+W RD         +P   H  ++   +             ++W+  LRD G++ V+GVPT PG++ R+A  IA+ R+T++G  F V S A      AYT   L +HTDL  RE  PG+Q LHCL ++A GG+S FVDGF  A+ LR E+PEDF TLCE+PI F+ KD     +   P I +D  G++ E+      RGP + PA  M  +Y A   F  +   P   ++ K++AG M +F+NRR LH R AFDP +G RHL+G Y+D DE
Sbjct:   91 IDWQDGHRSRFDPGWLRAHAYDDESRAERLAAHQTTRVWRRDF-------EVPVFQHDQLMDDDS-----------ALLEWMLALRDLGLSRVDGVPTAPGSLQRIAQRIAFIRETNFGVLFDVKSKAEAADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNNADGGDSVFVDGFAIAQALRDEAPEDFRTLCEMPIEFRNKDRRSDYHCLAPVIALDARGEISEIRIANFLRGPFDAPAERMDALYHAWRAFLTLTRDPRFRLQQKLRAGQMWSFDNRRTLHARTAFDPASGERHLQGCYIDRDE 380          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_085723939.1 (gamma-butyrobetaine dioxygenase [Pseudomonas sp. R37(2017)])

HSP 1 Score: 229.6 bits (584), Expect = 1.600e-56
Identity = 118/307 (38.44%), Postives = 164/307 (53.42%), Query Frame = 0
Query:   27 VTWKDGFSHAFPSAWLRQHCFE-----TRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            V W+DG +  F   WLR H ++      RQ H  + RLW  DL        LP   +  ++             +   +QW+  +RD G+  V GVPT PG++ ++A  I++ R++++G  F V S       AYT   L +HTDL  RE  PG+Q LHCL +DA+GGES FVDGF  A+ LRRE PE F +LCE+P+ F+ KD         P I +D  GQ+ E+      RGP +     M R+Y+A   F  +   P   +  ++  G++  F+NRR LH R AFDP TG RH +G YVD DE
Sbjct:   89 VAWQDGHASRFDPGWLRAHAYDDESRAERQAHKPKARLWHSDL-------QLPVFDYQALMN-----------DSQALLQWLLAVRDVGLTQVRGVPTEPGSLKQVAQRISFIRESNFGVLFNVQSKADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAEGGESIFVDGFAIADALRREDPESFKSLCEIPVEFRNKDRHSDYRCLAPIIALDALGQVSEIRMANFLRGPFDASVEQMPRLYQAYRRFIAMTREPRFRLMQRLNPGELWCFDNRRTLHARNAFDPATGARHFQGCYVDRDE 377          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_027312949.1 (gamma-butyrobetaine dioxygenase [Balneatrix alpica])

HSP 1 Score: 228.4 bits (581), Expect = 3.700e-56
Identity = 118/307 (38.44%), Postives = 173/307 (56.35%), Query Frame = 0
Query:   27 VTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            + W+DG    +   WLR HC+      TRQ+   Q + W RD +       LP   +++V++                + W+  LRD+G++L+  V T PGT++++A+ I++ R+T++G  F V +       AYT + L +HTDL  RE  PG+Q LHCLA+DA+GGES  VDGF  AE +R   P++FA L  +P+ F  KD      +  P + ++ AGQ+VEV      RGPL+LPA  + R YRA   F  +   P      ++  GD++ F+NRR+LH R+AFD R G RHL+G YVD DE
Sbjct:   89 ILWEDGHRSRYHPGWLRAHCYAEAMRATRQW---QAQSWDRDSIR----EALPEFDYAEVME-----------DDRALLDWLRLLRDWGISLLRQVDTTPGTLLKVANRISFIRETNFGTVFDVQAKPDANTAAYTNLRLPLHTDLPTRELQPGLQFLHCLANDAEGGESILVDGFRIAEHMREHYPDEFAALSSLPMEFHNKDRHSDYRFSAPALQLNRAGQVVEVRLANFLRGPLDLPADQVLRHYRAYRTFIALTREPVFQFFYRLSPGDLLVFDNRRVLHARRAFDLRQGRRHLQGCYVDRDE 377          
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_067297225.1 (gamma-butyrobetaine dioxygenase [Marinobacterium profundum])

HSP 1 Score: 228.0 bits (580), Expect = 4.800e-56
Identity = 116/300 (38.67%), Postives = 171/300 (57.00%), Query Frame = 0
Query:   31 DGFSHAFPSAWLRQHCF--ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329
            DG S  F   WLR HC+  + R     QP +W +  +       LP   ++D+++  A             ++W+  LRD G++L++   T PGT+ ++A+ I++ R+T++G  F V S       AYT + L +HTDL  RE  PG+Q LHCL +DA GGES  VDGF  AE +R E P+DFA L  +P+ F  KD +    ++ P + +D  G ++EV F    RGPL++PA  + R YRA + F  +   P    E ++  GD++ F+NRR+LH R+AFD + G RHL+G YVD DE
Sbjct:   96 DGHSSRFHPGWLRTHCYSEQARAERQWQPEIWDKAAIEV----CLPKYDYADMMQDDA-----------VLLRWLRKLRDCGISLLQNTDTRPGTLQQVAERISFIRETNFGTLFDVRSKPDANTAAYTTLRLPLHTDLPTRELQPGLQFLHCLENDASGGESILVDGFRIAEHMREEYPDDFAALSRLPMDFYNKDRNSDYRFRGPALVLDGQGTVIEVRFANFLRGPLDVPADQVVRHYRAYSTFIRLTREPRFQFEYRLVPGDLLVFDNRRVLHARRAFDLQQGQRHLQGCYVDRDE 380          
The following BLAST results are available for this feature:
BLAST of NO17G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855754.12.100e-16880.80gamma-butyrobetaine dioxygenase [Nannochloropsis g... [more]
EWM24190.12.100e-16880.80gamma-butyrobetaine dioxygenase [Nannochloropsis g... [more]
WP_095600255.14.200e-6039.94gamma-butyrobetaine dioxygenase [Pseudomonas sp. P... [more]
WP_095647209.13.900e-5840.58gamma-butyrobetaine dioxygenase [Pseudomonas indic... [more]
WP_084336089.16.700e-5840.58gamma-butyrobetaine dioxygenase [Pseudomonas indic... [more]
WP_017521457.13.300e-5739.94gamma-butyrobetaine dioxygenase [Pseudomonas nitro... [more]
PJI46217.14.300e-5739.29gamma-butyrobetaine dioxygenase [Pseudomonas sp.][more]
WP_085723939.11.600e-5638.44gamma-butyrobetaine dioxygenase [Pseudomonas sp. R... [more]
WP_027312949.13.700e-5638.44gamma-butyrobetaine dioxygenase [Balneatrix alpica... [more]
WP_067297225.14.800e-5638.67gamma-butyrobetaine dioxygenase [Marinobacterium p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003001NSK003001Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02170.1NO17G02170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02170.2NO17G02170.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|165568gene_7670Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100325g5gene6277Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02170.1NO17G02170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02170.2NO17G02170.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02170 ID=NO17G02170|Name=NO17G02170|organism=Nannochloropsis oceanica|type=gene|length=4465bp
ACAGGAAGCTATGTCTTCTATTGAAAACCACGCCACCGCCACCCTCCCTC
GCCCGGGCATGCCTGCCGTCCCACTTTCTCCGTCCAGGAAAGCACGTCCT
CCAGCAGGACCTGAGTCTCGCCTTTTAAGCATGCGAAACATCTCCTTGGT
AAGAGATCGAGCGACAAAGAGACGCCAAAGTGTTGGGACGAGGCCTCTCA
AAATCACCCATCTTCGGACCCCGTCCGGGTGTCTCTCCCCTGCTGGCATC
ATCGCTTGTCGCCTCTACAAACATTCCCGAACAGATTCTGGAATCACTTC
TGCTCCGCCTTTCTTATATTATAGTCTTTGAAAGTCTTTTCTGAGTCCTT
TCGTGTTAGCAAACGAAACACTGCATTCCCAATCTGTAATTCTCTTAGAT
TCTCGGACACCCCGTTACCCCATTTTCCCTCCCTCTCCCTCCCCACGCGC
TTACCTTTCCCACCCTCACCACTACCTAGGTGAAACTGCATCAGGAAGAC
GGGATAGTTGAGGTCGCGTGGCAGGATGGGGCCCGCGGCCTGTTCCATGG
CGCATGGTTGAGGGACAACTGCTCCAAGTATTTTGACCCTTCCGGCGGGC
AGCGCATTCAAAATACCTTGAATCTCGGAGCCGATGCCTACATCCTTACG
CAAGCAATGTCATCGTCTCTGGCTGGTGAAAATGCGAGCACCCCTTCTTC
TTCTTCTCCCACCACCCCGCATGAGCTCTTCAAAGTGACCTGGAAAGACG
GCTTCTCCCACGCCTTTCCATCCGCGTGGCTTCGTCAACACTGCTTTGAG
ACCCGCCAATACCACCATGTTCAGCCCCGATTATGGGGCCGAGATCTGGT
GTCTTATTTTCCTGGGCATGTTCTTCCCACAATTGCCCACAGTGACGTCG
TCAAGGTTGCCGCGGGGAAGGAAGCCGGGTGGGAGGTAGCTGCGCATGGT
TTTGTCCAGTGGATCACCCACTTGCGTGATTACGGCGTAGCGCTCGTGGA
GGGTGTGCCGACAGTCCCTGGGACAGTTATGCGCATGGCGGATTTGATTG
CCTACCACCGGAAAACGCACTACGGAGATTCATTTCAGGTTGTCTCAGCG
CGCAAGCCCAAGCACTTAGCGTACACGCCTGTGGAACTCGAAGgtacatt
cttcttattcattcttcgttccctccttcctcttcgtcttttctttccct
tatttacatctttctttgtcctctttgtctctcatcctcccaacccagTT
CACACAGATCTCAACTACCGCGAGTCCAGCCCGGGCATCCAGCTATTGCA
CTGCCTGGCTTCGGATGCGCAAGGTGGGGAAAGCACGTTTGTGGATGGGT
TTTTGGCGGCGGAGACCTTGCGGCGAGAGAGCCCTGAGGATTTTGCAACA
CTGTGTGAGGTTCCAATCCCGTTCAAGGTCAAGGATGGCTCTGGCTTCCA
GTACTACAAGATTCCTACTATTTGCGTGGACGATGCCGGGCAGTTAGTCG
AGGTTCATTTCAACGAGCGAACGCGCGGGCCTTTAGAGCTACCAGCAGCG
GACATGGCTCGAGTGTATCGAGCGTTGGCCCACTTTCAAGAGATAGCATG
CCGGCCCGACTTGTGCGTGGAGGTGAAAATGAAAGCAGGGGATATGGTGG
CGTTTAACAACCGCCGGATCCTGCATGGGCGGAAGGCGTTTGATCCGAGG
ACTGGGCTGCGGCATTTGGAAGGAACGTACGTGGACATGGATGAGTTTGG
ATGTTGCTTGCGCAAAAATGGGATAACGCCCTTGGGCATTGTGCGAGCGC
AGGGCGGGCGAGGCGGAAGGGGGATGGAAGGTAGTGAAAGCAAGGGGGGG
GGAAGAAGAGGGCGCAGAATCAACAGGCATTTGCATTAGCCTCTGTGGCG
TTGACGCAGCTTGGGCAGCAAACAGGGGATGGGAGGCACGGGAAGGCGAC
CGCGCCGCGAGCGTCACTTTGAAAGGCCAGGCAGATATCATGAGATGGCA
GCAGAAAGATATAAAGGAAGCGGTCCGTTGTTGAGAGCAAAGGCAGGTTT
GTTCATGAGATGCATGGTTTGCGAGTTTGTTTTGGAGAAGACGAGGAAAC
ATATGGTTTGTGCGCCGTTTCGAGTATGTGTATGACGTATTGTTTTTGCA
GGTATCTACCTTGGATTGTGATATTCATTCAACGCTGAGCAGCAATTTAA
AAAAATGGGCGTGGAAATATTCAAGTTGTCGAGGAGAGACAGCAATCTTT
GCGTGAGAGCAAGATAGGAAGAGACGAGTTTGTGTAGAAACATGCACATA
CGAGCATGAGTGTAGTGATATTAGAGATAAGGAGAGGTTGGACTTAGACG
GAGAGTTTCCGTTCAAACGAGGGCACATCCAGGAATCGGAGAGAGGGATA
AGGGATGCACTTGAGCGAGTGTTAAGTTTTCGTATTCGCCTGCGGAAGCA
TATGTGAATCAAAAGCAAAACAAGCGCGACAGGATAAATCAGAAAGGCGA
AGGAGACGACCGGTAAAAGGAAGACACAGAGCCAGGAGAAATTTGGAGGG
GGGAATCGAAATCCCGTGCCAGATACATTTTCTTCATTCTGTCCAAAATC
GTCATCTATTCTACACATGCAAATTTGCCTGTCTTTGAAATTCACCTACC
CCCATACCTATGATGGTGACGAATGCGAAGGTGGTGTTGTCTTTCCTCCA
GCGACATTTCCTCCCGCAGCGGTCCTACCGGCCGCACCAGGCACATCTTT
GCCATCCAAGTTTGCGTTCGAATTTTCTATGTCTTGGGCGGCCAAGGATT
CAAAAAGCTTCATGTAAATTTTCTCCTCACTCGTCTCGTCGCTGTGGAGC
TTCTGTTGTCGAAGCTGCTCCGCCGAGGTTCGAATTACTTCTAGCAACAC
GTCCACTTCCTGCCAGGACACATCGTAATGTCGATAATCAGTCAAAAGCT
TCTTAAAATACGCACGAAACTCCTTAGAATCGCTCATGTCCACATCCGTA
GGGTCGACGCCGGTTTGATAAATGGCCTGGGAGACGGAGCGAATATGTTT
GAAAATAGATTGATAAGCTGCAACACTCTGCAAGTCTTTGCGCATTCGGT
CCTTTCCGTGCCCGCGTGCAAAGGCAGTAGCAAGGGCAAAAAGCCCTGCG
CCCAGTCCCAAGGCCCCGATGGTTATGTACATGAAGGCCTCAGGATTCGT
GTCGAGCGAGCCAGGCAATTTGACATTCATGCCAAAGAATGCACCCATTG
TGGCTGCAGATGCTAAACTGGTACTGACCACTGTCAACAGAAGGGTAACG
CGCAACACGCGATTCCTCATAAGATCGACATTAATCGCGAACACCTCCTG
AGCGCTCTGAACCCGCGCCTGGAGAATCTTGATCTGCTGTCCGATCAAAG
ACAATTGTCGGAGATAGTTCTCGAGGAGGAGCTCTACTTCCGAATGCAGG
GTCGGGTCCAGGCACTGAATTTGGTTCGATTGCCCATCATGATTCTTCTC
CATCATGGCTTTTTCAGACAACAGCATCGCCAACATATCCTCTTCAGAAT
TGACCAACTCCTGAATCACGTCGACGGTTTCCTGCATATTGCTGTACGCA
ACGGCCAGACCATCTTTCAATGGGACCAGCTTGAACAATTGCTCTTCTTG
GTCGGAACCTTGCGAATCCACTAGCTCCTTGAGCTCCGTCTCGACGATCA
GCGTCAGAAGTTCCTTGATCCGGCTAAACTGGTTACAGAAACTCCGTAAG
GCCTGTTCCACCACAACTAGCTCGTACGAGACTTCGTAAGTCCCAATTGC
AGACAAGGCAGCACCCTCGGTCTTGGCCAAGTGCGTTTGCTGCAAGTGCT
GGATTTTTATTGCGCTGGATATATCAGCAATTACGGATTGGACGGTCGGG
TCTTGTGGGTCAAAAGCTAAGCAACTATCTTTCGAAATGACAAGCCGCAG
GGGATGCATGACAAAGATGATGACGTCATTGCGTGGGAGAATGACAGGTG
TGAGGCGACCGCCGCGCTTGTGAAGGGCGTCGGGCGAGAGCGCAATAAGG
TCCCGTACGTGCATTTCAGTGTTGAGCAAGAGTTCCTTTATAGAGGTCGT
CCGCGTCGTAACTTCTCCCTTTGCGTCCACTTGCAAGGCTTGCATGCTTC
GGTCGAAGCGGCCGAGCTTGGTGGCCAAAATCTCGTATGGGGAGAGCGAC
GTGCGTTGCTGCAGTTTGGTGTTGTTGCCGTACAGATTGCCCTGCTTGCC
TTTTTCCATCATGATGCCCCGCCGCTGGCCGAGGCCACCGCGAAATGTAA
GGGAAGACGTTGGACCGCAGAGGCTAAAAGTGGCCAATGGACTGCCACGG
TGAGCGGCGAAAGTGGAGGGCTGACGCCAGGCTTGCCGCTGGCAGGGCCG
GAGGAGACGGCGCATAGTGCCCGGACCCGGAGGCGGCTTCAGAGGGGCAA
TGTGCCTGCCTGTTG
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protein sequence of NO17G02170.1

>NO17G02170.1-protein ID=NO17G02170.1-protein|Name=NO17G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=481bp
MSSIENHATATLPRPGMPAVPLSPSRKARPPAGPESRLLSMRNISLVKLH
QEDGIVEVAWQDGARGLFHGAWLRDNCSKYFDPSGGQRIQNTLNLGADAY
ILTQAMSSSLAGENASTPSSSSPTTPHELFKVTWKDGFSHAFPSAWLRQH
CFETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVA
AHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQV
VSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVD
GFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQL
VEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDM
VAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDEFGCCLRKNGITPLGIVR
AQGGRGGRGMEGSESKGGGRRGRRINRHLH*
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protein sequence of NO17G02170.2

>NO17G02170.2-protein ID=NO17G02170.2-protein|Name=NO17G02170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=376bp
MSSSLAGENASTPSSSSPTTPHELFKVTWKDGFSHAFPSAWLRQHCFETR
QYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFV
QWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARK
PKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAA
ETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHF
NERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNN
RRILHGRKAFDPRTGLRHLEGTYVDMDEFGCCLRKNGITPLGIVRAQGGR
GGRGMEGSESKGGGRRGRRINRHLH*
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Synonyms
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