NO17G02170, NO17G02170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02170 vs. NCBI_GenBank
Match: XP_005855754.1 (gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana CCMP526] >EKU20595.1 gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 601.3 bits (1549), Expect = 2.100e-168 Identity = 282/349 (80.80%), Postives = 310/349 (88.83%), Query Frame = 0 Query: 1 MSSSLAGENASTPSSSSPTTPHELFKVTWKDGFSHAFPSAWLRQHCFETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDEFGCCLRKNGITPLGIVRAQGG 350 +S+ AG PSS + E +VTWKDGFSHAFPSAWLRQHC+ETRQ+H V PR+WGRDLVSYFPG+VLPT+ +SDVVKVAAG +AGW+ +A GFVQW+ HLRDYGVAL+E VPT PGTVM+MADLIAYHRKTHYG+SFQVVSARKP+HLAYTPVELEVHTDLNYRESSPGIQLLHCLA+DA GGESTFVDGF AETLRRES ED+ TLCEVPIPF VKDG GF Y+KIPTIC+DDAG+LVE+HFNERTRGPLELPAA M RVYRALAHFQ IACRP+LCVEVKMKAGDMVAFNNRRILHGRKAFDPRTG+RHLEGTYVDMDEF CLRK+G+TPL IVRAQ G Sbjct: 99 LSACAAGPAKGQPSSGASA---EFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEG 444
BLAST of NO17G02170 vs. NCBI_GenBank
Match: EWM24190.1 (gamma-butyrobetaine dioxygenase [Nannochloropsis gaditana]) HSP 1 Score: 601.3 bits (1549), Expect = 2.100e-168 Identity = 282/349 (80.80%), Postives = 310/349 (88.83%), Query Frame = 0 Query: 1 MSSSLAGENASTPSSSSPTTPHELFKVTWKDGFSHAFPSAWLRQHCFETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDEFGCCLRKNGITPLGIVRAQGG 350 +S+ AG PSS + E +VTWKDGFSHAFPSAWLRQHC+ETRQ+H V PR+WGRDLVSYFPG+VLPT+ +SDVVKVAAG +AGW+ +A GFVQW+ HLRDYGVAL+E VPT PGTVM+MADLIAYHRKTHYG+SFQVVSARKP+HLAYTPVELEVHTDLNYRESSPGIQLLHCLA+DA GGESTFVDGF AETLRRES ED+ TLCEVPIPF VKDG GF Y+KIPTIC+DDAG+LVE+HFNERTRGPLELPAA M RVYRALAHFQ IACRP+LCVEVKMKAGDMVAFNNRRILHGRKAFDPRTG+RHLEGTYVDMDEF CLRK+G+TPL IVRAQ G Sbjct: 145 LSACAAGPAKGQPSSGASA---EFLQVTWKDGFSHAFPSAWLRQHCYETRQHHQVNPRMWGRDLVSYFPGYVLPTLPYSDVVKVAAGSDAGWQTSAQGFVQWMVHLRDYGVALIEDVPTTPGTVMKMADLIAYHRKTHYGNSFQVVSARKPEHLAYTPVELEVHTDLNYRESSPGIQLLHCLAADAAGGESTFVDGFWVAETLRRESAEDYRTLCEVPIPFLVKDGEGFHYHKIPTICLDDAGRLVEIHFNERTRGPLELPAAVMGRVYRALAHFQAIACRPELCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGMRHLEGTYVDMDEFLTCLRKHGVTPLSIVRAQEG 490
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_095600255.1 (gamma-butyrobetaine dioxygenase [Pseudomonas sp. PIC25] >PAU59692.1 gamma-butyrobetaine dioxygenase [Pseudomonas sp. PIC25]) HSP 1 Score: 241.5 bits (615), Expect = 4.200e-60 Identity = 123/308 (39.94%), Postives = 164/308 (53.25%), Query Frame = 0 Query: 26 KVTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 +V W+DG F WLR H + E R + R+W L + P + D + W+ LRD G+ LV+G+PT PGT+ +A IA+ R++++G F V S AYT L +HTDL RE PG+Q LHCL +DA GG+S FVDGF AE LRRE+P+DF TLCEVP+ F+ KD + P I +D G + E+ RGP + PA M +YRA HF + P VE +++AG M F+NRR LH R AFDP +G RH +G Y+D DE Sbjct: 94 RVDWQDGHVSRFHPGWLRAHAYDDLSREERLRERPRSRIWAAGLNEHLPVFDYAVVMEDD----------------RALLDWLRALRDTGLTLVQGMPTEPGTLQHIARRIAFIRESNFGVLFNVQSRADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAVGGDSLFVDGFAIAEALRREAPDDFRTLCEVPVEFRNKDRHSDYRCRAPIIALDTFGAVTEIRIANFLRGPFDAPARQMPALYRAYRHFIALTREPRFRVERRLEAGQMWCFDNRRTLHARHAFDPSSGTRHFQGCYIDRDE 385
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_095647209.1 (gamma-butyrobetaine dioxygenase [Pseudomonas indica] >PAU63260.1 gamma-butyrobetaine dioxygenase [Pseudomonas indica]) HSP 1 Score: 235.0 bits (598), Expect = 3.900e-58 Identity = 125/308 (40.58%), Postives = 165/308 (53.57%), Query Frame = 0 Query: 26 KVTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 +V W DG + WLR H + E R + RLW L + LP ++ V+K + W+ LRD G+ V+G+PT PGT+ +A IA+ R++++G F V S AYT L +HTDL RE PG+Q LHCL +DA GG+S FVDGF AE LRRE+PEDF TLCE+P+ F+ KD P I +D G + E+ RGP + PA M +YRA HF + P VE +++AG M F+NRR LH R AFDP +G RH +G YVD DE Sbjct: 94 RVDWPDGHVSRYHPGWLRAHAYDDLSREERLRERPRSRLWATGLNEH-----LPVFDYAAVMK-----------DDRTLLDWLRALRDTGLTQVQGMPTEPGTLQHIARRIAFIRESNFGVLFNVQSRADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAVGGDSLFVDGFAIAEALRREAPEDFRTLCELPVEFRNKDRHSDYRCLAPIIALDAHGAVTEIRIANFLRGPFDAPARQMPALYRAYRHFIALTREPRFRVERRLEAGQMWCFDNRRTLHARHAFDPSSGARHFQGCYVDRDE 385
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_084336089.1 (gamma-butyrobetaine dioxygenase [Pseudomonas indica] >SDL68386.1 gamma-butyrobetaine dioxygenase [Pseudomonas indica]) HSP 1 Score: 234.2 bits (596), Expect = 6.700e-58 Identity = 125/308 (40.58%), Postives = 164/308 (53.25%), Query Frame = 0 Query: 26 KVTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 +V W DG + WLR H + E R + RLW L + LP ++ V+K + W+ LRD G+ V+G+PT PGT+ +A IA+ R++++G F V S AYT L +HTDL RE PG+Q LHCL +DA GG+S FVDGF AE LRRE+PEDF TLCE+P+ F+ KD P I +D G + E+ RGP PA M +YRA HF + P VE +++AG M F+NRR LH R AFDP +G RH +G YVD DE Sbjct: 94 RVDWPDGHVSRYHPGWLRAHAYDDLSREERLRERPRSRLWATGLNEH-----LPVFDYAAVMK-----------DDRTLLDWLRALRDTGLTQVQGMPTEPGTLQHIARRIAFIRESNFGVLFNVQSRADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAVGGDSLFVDGFAIAEALRREAPEDFRTLCELPVEFRNKDRHSDYRCLAPIIALDAHGAVTEIRIANFLRGPFNAPARQMPALYRAYRHFIALTREPRFRVERRLEAGQMWCFDNRRTLHARHAFDPSSGARHFQGCYVDRDE 385
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_017521457.1 (gamma-butyrobetaine dioxygenase [Pseudomonas nitroreducens]) HSP 1 Score: 231.9 bits (590), Expect = 3.300e-57 Identity = 123/308 (39.94%), Postives = 169/308 (54.87%), Query Frame = 0 Query: 27 VTWKDGFSHAFPSAWLRQHCFE-----TRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVS-ARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 V W+DG F WLR H ++ R H R+W RD +P H +++ + ++W+ LRD G++ V+GVPT PG++ R+A IA+ R+T++G F V S A AYT L +HTDL RE PG+Q LHCL +DA+GG+S FVDGF A+ LR E+PEDF TLCE+PI F+ KD P I +D G++ E+ RGP + PA M +Y A F + P ++ K++AG M F+NRR LH R AFDP +G RHL+G Y+D DE Sbjct: 91 VDWQDGHRSRFDPGWLRAHAYDDESRAERLAAHQTTRVWRRDF-------EVPVFQHDRLLEDDS-----------ALLEWMLALRDLGLSRVDGVPTAPGSLHRIAQRIAFIRETNFGVLFDVKSKAAAADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAEGGDSVFVDGFAIAQALRDEAPEDFRTLCEMPIEFRNKDRRSDYRCLAPVIALDARGEISEIRIANFLRGPFDAPAEHMDALYHAWRAFLTLTRDPRFRLQQKLRAGQMWCFDNRRTLHARTAFDPASGERHLQGCYIDRDE 380
BLAST of NO17G02170 vs. NCBI_GenBank
Match: PJI46217.1 (gamma-butyrobetaine dioxygenase [Pseudomonas sp.]) HSP 1 Score: 231.5 bits (589), Expect = 4.300e-57 Identity = 121/308 (39.29%), Postives = 169/308 (54.87%), Query Frame = 0 Query: 27 VTWKDGFSHAFPSAWLRQHCFE-----TRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVS-ARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 + W+DG F WLR H ++ R H R+W RD +P H ++ + ++W+ LRD G++ V+GVPT PG++ R+A IA+ R+T++G F V S A AYT L +HTDL RE PG+Q LHCL ++A GG+S FVDGF A+ LR E+PEDF TLCE+PI F+ KD + P I +D G++ E+ RGP + PA M +Y A F + P ++ K++AG M +F+NRR LH R AFDP +G RHL+G Y+D DE Sbjct: 91 IDWQDGHRSRFDPGWLRAHAYDDESRAERLAAHQTTRVWRRDF-------EVPVFQHDQLMDDDS-----------ALLEWMLALRDLGLSRVDGVPTAPGSLQRIAQRIAFIRETNFGVLFDVKSKAEAADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNNADGGDSVFVDGFAIAQALRDEAPEDFRTLCEMPIEFRNKDRRSDYHCLAPVIALDARGEISEIRIANFLRGPFDAPAERMDALYHAWRAFLTLTRDPRFRLQQKLRAGQMWSFDNRRTLHARTAFDPASGERHLQGCYIDRDE 380
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_085723939.1 (gamma-butyrobetaine dioxygenase [Pseudomonas sp. R37(2017)]) HSP 1 Score: 229.6 bits (584), Expect = 1.600e-56 Identity = 118/307 (38.44%), Postives = 164/307 (53.42%), Query Frame = 0 Query: 27 VTWKDGFSHAFPSAWLRQHCFE-----TRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 V W+DG + F WLR H ++ RQ H + RLW DL LP + ++ + +QW+ +RD G+ V GVPT PG++ ++A I++ R++++G F V S AYT L +HTDL RE PG+Q LHCL +DA+GGES FVDGF A+ LRRE PE F +LCE+P+ F+ KD P I +D GQ+ E+ RGP + M R+Y+A F + P + ++ G++ F+NRR LH R AFDP TG RH +G YVD DE Sbjct: 89 VAWQDGHASRFDPGWLRAHAYDDESRAERQAHKPKARLWHSDL-------QLPVFDYQALMN-----------DSQALLQWLLAVRDVGLTQVRGVPTEPGSLKQVAQRISFIRESNFGVLFNVQSKADADSNAYTAFNLPLHTDLPTRELQPGLQFLHCLVNDAEGGESIFVDGFAIADALRREDPESFKSLCEIPVEFRNKDRHSDYRCLAPIIALDALGQVSEIRMANFLRGPFDASVEQMPRLYQAYRRFIAMTREPRFRLMQRLNPGELWCFDNRRTLHARNAFDPATGARHFQGCYVDRDE 377
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_027312949.1 (gamma-butyrobetaine dioxygenase [Balneatrix alpica]) HSP 1 Score: 228.4 bits (581), Expect = 3.700e-56 Identity = 118/307 (38.44%), Postives = 173/307 (56.35%), Query Frame = 0 Query: 27 VTWKDGFSHAFPSAWLRQHCF-----ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 + W+DG + WLR HC+ TRQ+ Q + W RD + LP +++V++ + W+ LRD+G++L+ V T PGT++++A+ I++ R+T++G F V + AYT + L +HTDL RE PG+Q LHCLA+DA+GGES VDGF AE +R P++FA L +P+ F KD + P + ++ AGQ+VEV RGPL+LPA + R YRA F + P ++ GD++ F+NRR+LH R+AFD R G RHL+G YVD DE Sbjct: 89 ILWEDGHRSRYHPGWLRAHCYAEAMRATRQW---QAQSWDRDSIR----EALPEFDYAEVME-----------DDRALLDWLRLLRDWGISLLRQVDTTPGTLLKVANRISFIRETNFGTVFDVQAKPDANTAAYTNLRLPLHTDLPTRELQPGLQFLHCLANDAEGGESILVDGFRIAEHMREHYPDEFAALSSLPMEFHNKDRHSDYRFSAPALQLNRAGQVVEVRLANFLRGPLDLPADQVLRHYRAYRTFIALTREPVFQFFYRLSPGDLLVFDNRRVLHARRAFDLRQGRRHLQGCYVDRDE 377
BLAST of NO17G02170 vs. NCBI_GenBank
Match: WP_067297225.1 (gamma-butyrobetaine dioxygenase [Marinobacterium profundum]) HSP 1 Score: 228.0 bits (580), Expect = 4.800e-56 Identity = 116/300 (38.67%), Postives = 171/300 (57.00%), Query Frame = 0 Query: 31 DGFSHAFPSAWLRQHCF--ETRQYHHVQPRLWGRDLVSYFPGHVLPTIAHSDVVKVAAGKEAGWEVAAHGFVQWITHLRDYGVALVEGVPTVPGTVMRMADLIAYHRKTHYGDSFQVVSARKPKHLAYTPVELEVHTDLNYRESSPGIQLLHCLASDAQGGESTFVDGFLAAETLRRESPEDFATLCEVPIPFKVKDGSGFQYYKIPTICVDDAGQLVEVHFNERTRGPLELPAADMARVYRALAHFQEIACRPDLCVEVKMKAGDMVAFNNRRILHGRKAFDPRTGLRHLEGTYVDMDE 329 DG S F WLR HC+ + R QP +W + + LP ++D+++ A ++W+ LRD G++L++ T PGT+ ++A+ I++ R+T++G F V S AYT + L +HTDL RE PG+Q LHCL +DA GGES VDGF AE +R E P+DFA L +P+ F KD + ++ P + +D G ++EV F RGPL++PA + R YRA + F + P E ++ GD++ F+NRR+LH R+AFD + G RHL+G YVD DE Sbjct: 96 DGHSSRFHPGWLRTHCYSEQARAERQWQPEIWDKAAIEV----CLPKYDYADMMQDDA-----------VLLRWLRKLRDCGISLLQNTDTRPGTLQQVAERISFIRETNFGTLFDVRSKPDANTAAYTTLRLPLHTDLPTRELQPGLQFLHCLENDASGGESILVDGFRIAEHMREEYPDDFAALSRLPMDFYNKDRNSDYRFRGPALVLDGQGTVIEVRFANFLRGPLDVPADQVVRHYRAYSTFIRLTREPRFQFEYRLVPGDLLVFDNRRVLHARRAFDLQQGQRHLQGCYVDRDE 380 The following BLAST results are available for this feature:
BLAST of NO17G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02170 ID=NO17G02170|Name=NO17G02170|organism=Nannochloropsis oceanica|type=gene|length=4465bpback to top protein sequence of NO17G02170.1 >NO17G02170.1-protein ID=NO17G02170.1-protein|Name=NO17G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=481bpback to top protein sequence of NO17G02170.2 >NO17G02170.2-protein ID=NO17G02170.2-protein|Name=NO17G02170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=376bpback to top Synonyms
Publications
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