NO17G02150, NO17G02150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02150 vs. NCBI_GenBank
Match: XP_005855756.1 (hypothetical protein NGA_0602310 [Nannochloropsis gaditana CCMP526] >EKU20597.1 hypothetical protein NGA_0602310 [Nannochloropsis gaditana CCMP526] >EWM24195.1 2Fe-2S ferredoxin-type domain protein [Nannochloropsis gaditana]) HSP 1 Score: 410.6 bits (1054), Expect = 4.500e-111 Identity = 207/299 (69.23%), Postives = 241/299 (80.60%), Query Frame = 0 Query: 29 SHHAYRHATMRLFMTAAANHNN---PLSLEEISQKIKFEVTDLDAGAYGLESKDVAYAVEIXXXXXXXXXXXXXXXXXEELKRGRDGRGCVLISAIQPGGNAEKAAGEEQKIRVGDMICYLGREPNGMVRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMPQAPFIRKR 325 S H + T L T+ ++N PL+LEEIS KIKFE+TDLDAGAYGLESKDVAYAVEI EEL+RG+DGRGCVL+S++ P GNA +AAG++ KIRVGDMICYLG+EP GMVRTEGLDFEQTM ALR ++++ A +ITLVLKRLVFR S+D+SLSYTP P+E E G + WTQ+L ML GSQLRKELLR+GLPVY ++TLRFDQPYVTG+CGGEGICGTCLVQVLEGKELLNE D +E MV RKWGAANWRLSCRV+VGATNTPGTVRF+LMPQAPF +K+ Sbjct: 34 SRHFSKDVTAPLMATSETTNSNVPPPLTLEEISNKIKFEITDLDAGAYGLESKDVAYAVEI-AKVDIPLGGGGIGLGLEELRRGQDGRGCVLVSSLPPEGNAAQAAGDDGKIRVGDMICYLGQEPRGMVRTEGLDFEQTMGALRRFLETG-APAITLVLKRLVFRASLDVSLSYTPGPDE-ESQGRKAWTQTLPMLAGSQLRKELLRAGLPVYSQDTLRFDQPYVTGNCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGAANWRLSCRVIVGATNTPGTVRFKLMPQAPFTKKK 329
BLAST of NO17G02150 vs. NCBI_GenBank
Match: CBN77306.1 (Ferredoxin [Ectocarpus siliculosus]) HSP 1 Score: 193.7 bits (491), Expect = 8.700e-46 Identity = 110/268 (41.04%), Postives = 153/268 (57.09%), Query Frame = 0 Query: 52 LSLEEISQKIKFEVTDLDAGAYGLESKDVAYAVEIXXXXXXXXXXXXXXXXXEELKRGRDGRGCVLISAIQPGGNAEKAAGEEQKIRVGDMICYLGREPNGMVRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWG-AANWRLSCRVVVGATNTPGTVRFRLMPQA 319 L+L+ + +++ E G GLESKD YA+E+ EE+ RG DGRG VL++ ++PGGNAE A+G KI VGD +C G E M R E LD++QT+ L ++ + ++ I LV+KRLV RES+++ + E + GS LR E++R +PVYD T RFDQPY TG+C GEG CGTC V+V +G +LL PD E M++ + WRLSC+V+VG N GTVR + +PQA Sbjct: 84 LTLDGVYKRLTLETQSRADGVVGLESKDTDYAIEV--VKVQMQRKPSLGMQLEEVARGGDGRGLVLVAGLEPGGNAE-ASG---KICVGDTLCSAGIE-GDMSRVEALDWDQTVSVLGSFAEESE---IVLVIKRLVKRESINVQFELPSGSRDHE------------IKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQA 329
BLAST of NO17G02150 vs. NCBI_GenBank
Match: XP_002182418.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46319.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 161.0 bits (406), Expect = 6.200e-36 Identity = 105/298 (35.23%), Postives = 152/298 (51.01%), Query Frame = 0 Query: 22 AAAAAVRSHHAYRHATMRLFMTAAANHNNPLSLEEISQKIKFEVTDLDAGAYGLESKDVAYAVEIXXXXXXXXXXXXXXXXXEELKRGRDGRGCVLISAIQPGGNAEKAAGEEQKIRVGDMIC-YLGREPNGMVRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMPQA 319 A A + + A+ + TA+ L +++QK K E+ DLD G +G +SKD Y +E+ E+ DGRG V++S I GNA KA Q I VGD I + + R ++++T+EA+ +S+ +ITL L RL+ R V + + + SG Q + L G LR+ +R L +YD+ T RFDQP+ TG+CGG+G+CGTCLV VL+G +LLN D+ E+ I K +WR SCR VG N GT+R L PQ+ Sbjct: 17 AFAFVTPPYPVFLQASPTVLRTASQGATLDQHLMDLAQKFKLEIFDLDEGLFGFDSKDNRYGLEV-VHTNIDVGNDGLGLVLTEMAGSPDGRGLVMVSKIT--GNAAKA--NPQAIHVGDTITGVMANDGVLKERVTAFNYDKTVEAIGRAKESSTDGTITLELNRLIKRLPVRVEID--------DGSG---HVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVLQGMDLLNPKDS-HEVFITKGRPPSWRASCRTTVGFNNVGGTLRISLHPQS 297
BLAST of NO17G02150 vs. NCBI_GenBank
Match: GAX11699.1 (hypothetical protein FisN_7Lh069 [Fistulifera solaris]) HSP 1 Score: 105.9 bits (263), Expect = 2.400e-19 Identity = 71/218 (32.57%), Postives = 111/218 (50.92%), Query Frame = 0 Query: 105 ELKRGR-DGRGCVLISAIQPGGNAEKAAGEEQKIRVGDMICYL---GREPNGM--VRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMP 317 EL GR DG G ++S + GG A+ + +I VGD I L + N + V TE L ++ T++A+ + + D S+ + LKRL + V +++ Y PS +E + ++ + G LR+ +L G+ + D RFD TG CG EG CGTC + ++ G+ELL+ P E+ + R WRLSC+ VG G + R+ P Sbjct: 126 ELAGGREDGLGITVVSGLVEGGCADGS-----EIMVGDSISKLQVVDAQENEIVSVSTECLSYDGTVDAILSLPPAADGQSMVITLKRLRRKPKVQVTIQYPPSMKEND--------VTIELFSGENLRRSMLIKGIKLNDPLARRFDIG-GTGSCGAEGTCGTCSISIIRGQELLSPPGQTEQQMFR--NNPRWRLSCKARVGYGLREGELVVRVNP 327
BLAST of NO17G02150 vs. NCBI_GenBank
Match: XP_005761710.1 (hypothetical protein EMIHUDRAFT_438120 [Emiliania huxleyi CCMP1516] >EOD09281.1 hypothetical protein EMIHUDRAFT_438120 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 99.0 bits (245), Expect = 2.900e-17 Identity = 62/206 (30.10%), Postives = 101/206 (49.03%), Query Frame = 0 Query: 114 GCVLISAIQPGGNAEKAAGEEQKIRVGDMICYLGRE--PNGMVRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMPQ 318 G V + + GGN EKA + GD + E P V EGL F+ +E L + + A + + +KRLV + +++ + P E E + +++ G+ LR+ +L SG+ + D RFD TGDCGGEG C TC V+V +G + L+EP + E ++ K WRL+C+ +G + ++ P+ Sbjct: 62 GIVAVEGLVEGGNGEKATA---PLLPGDALVAAAEEGKPTTGVSLEGLPFDSVVERLSSL---SSAVGVVVSVKRLVRKPRATVTVRF-PEAEGREDA-------RMTLYQGANLRRAMLSSGVALNDPLARRFDAGVGTGDCGGEGTCCTCAVEVAKGLDALSEPSSQEVQMVAK-RFPRWRLACKATLGPIEQDEEIVLKVQPR 252
BLAST of NO17G02150 vs. NCBI_GenBank
Match: XP_002294309.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88664.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 94.7 bits (234), Expect = 5.500e-16 Identity = 67/226 (29.65%), Postives = 106/226 (46.90%), Query Frame = 0 Query: 105 ELKRGR-DGRGCVLISAIQPGGNAEKAAGEEQKIRVGDMICYLGREPNG-----------MVRTEGLDFEQTMEALRTY-IQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMPQ 318 E+ GR DG G ++ + GGNA + I GD I + + N V TE L ++ T+EAL + ++ I L +KR+ + V++ L Y P E + + + G LR+ +L G+ + DK + RFD TGDCG +G C TC+V V +G ELL+ E ++ K WR++C+ VVG G + ++ P+ Sbjct: 121 EIAGGREDGVGITIVEQVLEGGNAMGSG-----IMAGDSIVAIAVDRNSGGGLNDKLERIGVATECLGYDATIEALTSLPPPTSSEDEIILTVKRIRKQPKVNVKLQYPPYLNEPD--------TYIELFAGENLRRAMLTRGIKLNDKLSERFDSG-GTGDCGADGTCATCVVSVTKGGELLSPMKMTESQILSK--KPRWRMACKTVVGYGMMEGDLTIQVNPR 330
BLAST of NO17G02150 vs. NCBI_GenBank
Match: XP_002180355.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48546.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 94.4 bits (233), Expect = 7.100e-16 Identity = 69/236 (29.24%), Postives = 107/236 (45.34%), Query Frame = 0 Query: 105 ELKRGR-DGRGCVLISAIQPGGNAEKAAGEEQKIRVGDMICYLGREPNGMVR-----TEGLDFEQTME--ALRTYIQSNDAT---------------SITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMPQ 318 EL GR D G ++ + GG+AE + I GD I + + T G+D +T+E A+ T DAT + L LKRL + ++++L Y P E + L + G LR+ +L G+ + D + RFD + GDCG EG C TC V++++G L N E ++ K ANWR+SC+ +VG G++ R+ P+ Sbjct: 131 ELAGGREDSLGITIVEGLVEGGSAENS-----DILPGDCITKVAVRKSSSTSAPVDITAGMDLTETVEESAVTTECLGYDATVSAIVSLPPVSSEGETFVLTLKRLRRKPKINLTLQYPPEMNEPD--------VKLELFAGENLRRSMLVKGVKLNDALSRRFDSGGI-GDCGAEGTCATCAVKIVQGGNLCNPRAQQEAQILVK--RANWRMSCKTIVGYGMKEGSMTVRVSPR 350
BLAST of NO17G02150 vs. NCBI_GenBank
Match: GAX20758.1 (hypothetical protein FisN_7Hh069 [Fistulifera solaris]) HSP 1 Score: 94.0 bits (232), Expect = 9.300e-16 Identity = 68/218 (31.19%), Postives = 106/218 (48.62%), Query Frame = 0 Query: 105 ELKRGR-DGRGCVLISAIQPGGNAEKAAGEEQKIRVGDMICYL---GREPNGM--VRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMP 317 EL GR DG G ++S + GG A+ + +I VGD I L + N + V TE L ++ T++A+ + + D S+ + LKRL + V +++ Y PS +E + ++ + G LR+ +L G+ + D RFD TG CG C V +L G+ELL+ P E+ + R WRLSC+ VG G + R+ P Sbjct: 124 ELAGGREDGLGITVVSGLVEGGCADGS-----EIMVGDSISKLQVIDTQDNEIVSVSTECLSYDGTVDAVLSLPPAEDGQSMVITLKRLRRKPKVQVTIQYPPSMKEKD--------VTIELFSGENLRRSMLIKGIKLNDPLARRFDSG-GTGSCGXXXXXXXCSVSILRGQELLSPPGQTEQQMFR--NNPRWRLSCKARVGYGLREGELVVRVNP 325
BLAST of NO17G02150 vs. NCBI_GenBank
Match: KOO30718.1 (hypothetical protein Ctob_006999 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 90.5 bits (223), Expect = 1.000e-14 Identity = 65/215 (30.23%), Postives = 107/215 (49.77%), Query Frame = 0 Query: 104 EELKRGRDGR-GCVLISAIQPGGNAEKAAGEEQKIRVGDMICYLGREPNGMVRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYVTGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIRKWGAANWRLSCRVVVGATNTPGTVRFRLMPQ 318 EEL G DG+ G V++ ++ G NA A+ I GD I +G + + EGL ++QT+ L + + I L L+RL V ++L + P+E ++ + L +L G LR+ +L G+ + D RFD + TGDCGGEG C TC ++V +G + L+ + E ++ K WRL+C+ + + R+ P+ Sbjct: 190 EEL--GSDGQSGLVIVESVVAGSNAASAS---NPILPGDAIVAVG-PASESITVEGLTYDQTVAVLGSL---DPTRPIELTLRRLERLPRVSVTLQF---PQEGGRA-----DEMLELLPGMPLRRSILSRGIKLNDPLARRFDAGWGTGDCGGEGTCCTCALEVTKGIQALSVQASQERQMLAK--HPTWRLACKASIAELKEDCELVLRVAPR 385
BLAST of NO17G02150 vs. NCBI_GenBank
Match: KOO24143.1 (hypothetical protein Ctob_005117, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 79.3 bits (194), Expect = 2.400e-11 Identity = 55/177 (31.07%), Postives = 83/177 (46.89%), Query Frame = 0 Query: 114 GCVLISAIQPGGNAEKAAGEEQKIRVGDMICYLGRE---PNGMVRTEGLDFEQTMEALRTYIQSNDATSITLVLKRLVFRESVDISLSYTPSPEETEKSGTEPWTQSLSMLCGSQLRKELLRSGLPVYDKNTLRFDQPYV-TGDCGGEGICGTCLVQVLEGKELLNEPDAIEEMVIR 287 G LI +P +++ Q +++GD I +G E NG + TEG +E +E L + + +TL+LKR+V + +L P+ TE G LR L+R GL D R+D +G CGG G+C TC++ VL G E L+E A E ++R Sbjct: 12 GAALIRRARP-----RSSVLSQVVKIGDTIVGVGGEEDLSNGCIVTEGASYEALIEVLGNAVAKANGRPLTLLLKRMV---PLGRALVTARKPDGTE--------AQFVAYNGENLRMRLIREGLAPNDMRAQRYDNKAPGSGTCGGNGLCATCVISVLAGAENLSEKRAGERQLLR 172 The following BLAST results are available for this feature:
BLAST of NO17G02150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02150 ID=NO17G02150|Name=NO17G02150|organism=Nannochloropsis oceanica|type=gene|length=1759bpback to top protein sequence of NO17G02150.1 >NO17G02150.1-protein ID=NO17G02150.1-protein|Name=NO17G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top Synonyms
Publications
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