NO17G02050, NO17G02050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02050 vs. NCBI_GenBank
Match: CEO98787.1 (hypothetical protein PBRA_006901 [Plasmodiophora brassicae]) HSP 1 Score: 71.6 bits (174), Expect = 1.400e-9 Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 0 Query: 11 DKEWQEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQEL 61 D + +E L +HEIS LNTGLDR+TL+ILV+LCEAGVNPEALA+VV EL Sbjct: 10 DAQAREALSVLHEISEALNTGLDRETLSILVSLCEAGVNPEALAMVVCEL 59
BLAST of NO17G02050 vs. NCBI_GenBank
Match: XP_002116704.1 (hypothetical protein TRIADDRAFT_60747 [Trichoplax adhaerens] >EDV20763.1 hypothetical protein TRIADDRAFT_60747 [Trichoplax adhaerens]) HSP 1 Score: 69.7 bits (169), Expect = 5.300e-9 Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0 Query: 16 EVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 E L V EIS+LLNTGLDR+TL+I V LCEAG+NPEALA V+QELR Sbjct: 27 ETLDIVQEISDLLNTGLDRKTLSICVQLCEAGINPEALAFVIQELR 72
BLAST of NO17G02050 vs. NCBI_GenBank
Match: XP_024392953.1 (mitotic-spindle organizing protein 1-like [Physcomitrella patens] >PNR42151.1 hypothetical protein PHYPA_016980 [Physcomitrella patens]) HSP 1 Score: 67.8 bits (164), Expect = 2.000e-8 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0 Query: 15 QEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 +E L VH +SNLL TGLDRQTLA+L+ LCE GVNPEALA VV+ELR Sbjct: 10 RESLDIVHMMSNLLGTGLDRQTLAVLIALCEHGVNPEALAAVVKELR 56
BLAST of NO17G02050 vs. NCBI_GenBank
Match: XP_013410601.1 (mitotic-spindle organizing protein 1 [Lingula anatina]) HSP 1 Score: 67.8 bits (164), Expect = 2.000e-8 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0 Query: 15 QEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 +E + + EISNLLNTGLD +TLAI V+LCE+GVNPEALA V+QELR Sbjct: 13 RETMDTLLEISNLLNTGLDAETLAICVSLCESGVNPEALATVIQELR 59
BLAST of NO17G02050 vs. NCBI_GenBank
Match: XP_001432874.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK65477.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 66.6 bits (161), Expect = 4.500e-8 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0 Query: 8 MKRDKEWQEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 M +E QE L +HE+S +LN GLDRQ LAILV++ E GVNPEALALVV E++ Sbjct: 15 MSEKEEAQETLEIIHEMSQILNCGLDRQQLAILVSMIENGVNPEALALVVNEMK 68
BLAST of NO17G02050 vs. NCBI_GenBank
Match: PNR43589.1 (hypothetical protein PHYPA_015970 [Physcomitrella patens]) HSP 1 Score: 66.6 bits (161), Expect = 4.500e-8 Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 0 Query: 15 QEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 +E L VH +SNLL TGLDR TLAILV LCE GVNPEALA VV+ELR Sbjct: 18 RESLDTVHMMSNLLGTGLDRPTLAILVALCEHGVNPEALAAVVKELR 64
BLAST of NO17G02050 vs. NCBI_GenBank
Match: XP_004364387.1 (hypothetical protein CAOG_01519 [Capsaspora owczarzaki ATCC 30864] >KJE90174.1 hypothetical protein CAOG_001519 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 66.2 bits (160), Expect = 5.900e-8 Identity = 32/50 (64.00%), Postives = 42/50 (84.00%), Query Frame = 0 Query: 12 KEWQEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 +E +E + + E+S LL+TGLDR+TLAI V+LCE+GVNPEALA VV+ELR Sbjct: 7 REAKETMDVLFEMSKLLDTGLDRETLAICVSLCESGVNPEALAAVVKELR 56
BLAST of NO17G02050 vs. NCBI_GenBank
Match: EXX50288.1 (hypothetical protein RirG_272230 [Rhizophagus irregularis DAOM 197198w] >PKC05257.1 hypothetical protein RhiirA5_361581 [Rhizophagus irregularis] >PKC69942.1 hypothetical protein RhiirA1_414943 [Rhizophagus irregularis] >PKK75816.1 hypothetical protein RhiirC2_735788 [Rhizophagus irregularis] >PKY28072.1 hypothetical protein RhiirB3_416690 [Rhizophagus irregularis]) HSP 1 Score: 66.2 bits (160), Expect = 5.900e-8 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 0 Query: 16 EVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 E L +HE+S LLNTGLDR TL++ +NLCE GVNPEALA V++ELR Sbjct: 11 ETLDILHEMSTLLNTGLDRDTLSLCLNLCENGVNPEALAAVIKELR 56
BLAST of NO17G02050 vs. NCBI_GenBank
Match: XP_013792925.1 (mitotic-spindle organizing protein 1-like [Limulus polyphemus]) HSP 1 Score: 66.2 bits (160), Expect = 5.900e-8 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 0 Query: 2 GGTSAIMKRDKEWQEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 G T++ + + KE E+ + EIS LLNTGLD +TLAI V LCE+GVNPEALA V++ELR Sbjct: 8 GSTASTILQAKETFEI---IQEISRLLNTGLDTETLAICVRLCESGVNPEALASVIRELR 64
BLAST of NO17G02050 vs. NCBI_GenBank
Match: XP_008038370.1 (hypothetical protein TRAVEDRAFT_47747 [Trametes versicolor FP-101664 SS1] >EIW58604.1 hypothetical protein TRAVEDRAFT_47747 [Trametes versicolor FP-101664 SS1]) HSP 1 Score: 66.2 bits (160), Expect = 5.900e-8 Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0 Query: 9 KRDKEWQEVLGAVHEISNLLNTGLDRQTLAILVNLCEAGVNPEALALVVQELR 62 +R +E L +H+IS LLNTGLD++TLA V L E+GVNPEALA VVQELR Sbjct: 7 ERHSAAEETLNTLHDISQLLNTGLDKETLATCVGLIESGVNPEALAAVVQELR 59 The following BLAST results are available for this feature:
BLAST of NO17G02050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02050 ID=NO17G02050|Name=NO17G02050|organism=Nannochloropsis oceanica|type=gene|length=831bpback to top protein sequence of NO17G02050.1 >NO17G02050.1-protein ID=NO17G02050.1-protein|Name=NO17G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=92bpback to top Synonyms
Publications
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