NO17G02030, NO17G02030 (gene) Nannochloropsis oceanica

Overview
NameNO17G02030
Unique NameNO17G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1560
Alignment locationchr17:586891..588450 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlycerol-3-phosphate dehydrogenase [NAD( )]
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:586891..588450 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0046168glycerol-3-phosphate catabolic process
GO:0006072glycerol-3-phosphate metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity
Vocabulary: Cellular Component
TermDefinition
GO:0009331glycerol-3-phosphate dehydrogenase complex
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR0089276-PGluconate_DH_C-like
IPR006109G3P_DH_NAD-dep_C
IPR011128G3P_DH_NAD-dep_N
IPR006168G3P_DH_NAD-dep
Homology
BLAST of NO17G02030 vs. NCBI_GenBank
Match: EWM24210.1 (glycerol-3-phosphate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 688.3 bits (1775), Expect = 1.500e-194
Identity = 368/432 (85.19%), Postives = 390/432 (90.28%), Query Frame = 0
Query:    1 MTPSTTRRVNAITLPQYATFTLGFLSLVALLSWMCPQFISQA---HAATAFVGGAGSGSFGSRISRGTRRTQGQTTMLASARRSRSTRPLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEMWNL 430
            M+P T RR ++    +   F + FL++VALL   C   ++     HA  AFV  A + S G+R+++  +  + QT M  SARRSRS RPLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKE+VAEHINLHHRHPTYLSDI+LAP+IRAT  PEEAL DASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARP+TLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGE+LE+ILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEMWNL
Sbjct:    1 MSP-TFRRRHSNAPFKLQIFMVKFLAVVALLGCCCLHGVASGTPPHA--AFVPRASTKSLGNRLAKAPQARREQTIMQLSARRSRSMRPLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEEVAEHINLHHRHPTYLSDIALAPSIRATVQPEEALRDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPSTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGERLENILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEMWNL 429          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: XP_005829771.1 (hypothetical protein GUITHDRAFT_73617 [Guillardia theta CCMP2712] >EKX42791.1 hypothetical protein GUITHDRAFT_73617 [Guillardia theta CCMP2712])

HSP 1 Score: 465.3 bits (1196), Expect = 2.000e-127
Identity = 232/333 (69.67%), Postives = 280/333 (84.08%), Query Frame = 0
Query:   92 RFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQ-LIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVR 424
            R  VLGGGSFGLA+AS+LGKK  PV ILVR +D  + IN+HHR  TYL D++L  ++ AT   EEAL DA+ IIHAVPVQYSRKFL+++AP+VPK+ P+I TSKGIETGTLC+MQDIL E LG +R+ A+LSGPSFAREIA+GL TAVV AS+S+ L N   +I GC  FRVFTS DV+GVE+GGAVKNVIAIAAGMCEGLGLGTNA+A LVTRGC EMQ LA ++GA P+TL GLSGVGDTFGTCFGPLSRNRNLG+RLG+GEKLEDIL SSTEVAEG+ATA SLV+ L+ K  R++R +L+FPI++GV E+L+G+R+P EG++DLM MP+R
Sbjct:   15 RVTVLGGGSFGLAMASILGKKKYPVKILVRTQDAMDSINIHHRSSTYLKDVTLPDSVTATCDKEEALKDATLIIHAVPVQYSRKFLKEMAPYVPKDCPVICTSKGIETGTLCLMQDILREELGDSRDYAFLSGPSFAREIAVGLATAVVVASQSDTLTNRAAEIFGCENFRVFTSKDVIGVEIGGAVKNVIAIAAGMCEGLGLGTNAVAGLVTRGCLEMQTLARAVGASPSTLMGLSGVGDTFGTCFGPLSRNRNLGIRLGQGEKLEDILSSSTEVAEGYATALSLVEFLLTKMPRSFRMDLKFPILFGVAEVLKGERSPREGMKDLMLMPIR 347          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: CBJ31247.1 (Glycerol-3-phosphate dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 441.4 bits (1134), Expect = 3.200e-120
Identity = 219/342 (64.04%), Postives = 267/342 (78.07%), Query Frame = 0
Query:   87 LPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEMWN 429
            LP+PVR  V+GGG+FGLAL+ VL +  IP T+LVR + VAEH+N H+ HP YL  I L   I AT  P+EAL DA+F+IHAVPVQY+RKFLE++ PH+P  TPI+S SKGIET +L +M DIL +  G  R  A+LSGPSFAREIA+   TAVV AS+   LAN++  ++    FR FTS DVVGVEVGGAVKNVIA+AAGMCEGLGLGTNAMA LVTRGC EM+RLA+ LG +  TL+GLSGVGDTFGTCFGPLSRNRN G+RLGKGE +E+IL SSTEVAEG  TA +L  LI KT+++YR +L++ II+GV EIL+G R P EGL DLM MP++ EM++
Sbjct:  279 LPFPVRITVMGGGNFGLALSLVLARNQIPTTLLVRSDSVAEHVNKHNEHPNYLKGIKLPQHIVATADPKEALRDATFVIHAVPVQYTRKFLENVVPHMPAGTPILSVSKGIETSSLMLMNDILKDLCGTERSYAFLSGPSFAREIAMNQATAVVIASDDSCLANDMAKVLSSPTFRCFTSKDVVGVEVGGAVKNVIALAAGMCEGLGLGTNAMAGLVTRGCGEMRRLAIILGGKSRTLSGLSGVGDTFGTCFGPLSRNRNFGIRLGKGESMEEILASSTEVAEGVDTALALADLIRKTDKSYRIDLKYAIIFGVAEILKGTRFPKEGLEDLMTMPLKAEMYD 620          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: GAX09887.1 (hypothetical protein FisN_11Lh132 [Fistulifera solaris])

HSP 1 Score: 429.5 bits (1103), Expect = 1.200e-116
Identity = 210/354 (59.32%), Postives = 272/354 (76.84%), Query Frame = 0
Query:   72 TTMLASARRSRSTRPLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVE 426
            T    S+ + ++  P PYPVR AV+GGG+FGLAL+S+  +K  P TILVR++++A+ IN +H HP Y+ D+   PT+RATT P++ L DA++I+HAVPVQYSRKFL  +  ++P  TP++S SKGIET +L  M DIL ETLG  R  A+LSGPSFAREI  G+ TAVV ASE   LA ++  ++    FRVFTS DV+GVE+GGAVKNVIA+AAGMCEGLGLGTNAM+ LVTRGC EM+RL L+LGARP+T+ GLSGVGDTFGTCFGPLSRNR  G RLGKGE +E+IL SS+EVAEG  T+ +LV  I++  + YR +L++PI++GV +IL+GK TP +GL+ +M MP  +E
Sbjct:   38 TAFTRSSLQMQANSPPPYPVRIAVMGGGNFGLALSSISARKGFPTTILVREQEIADSINTNHTHPRYMRDVKFPPTLRATTNPQDCLPDATYIVHAVPVQYSRKFLNSVKDYIPPGTPVLSGSKGIETSSLGFMADILKETLGEERPYAFLSGPSFAREICEGVATAVVIASEDLLLARDLATLLSDGNFRVFTSRDVIGVEIGGAVKNVIALAAGMCEGLGLGTNAMSGLVTRGCGEMRRLGLTLGARPSTIAGLSGVGDTFGTCFGPLSRNRQFGYRLGKGETMEEILASSSEVAEGVDTSIALVNFIKQNCKGYRLDLKYPILFGVADILQGKLTPLDGLKGIMNMPFLME 391          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: GAX14409.1 (hypothetical protein FisN_11Hh132 [Fistulifera solaris])

HSP 1 Score: 426.4 bits (1095), Expect = 1.000e-115
Identity = 222/404 (54.95%), Postives = 290/404 (71.78%), Query Frame = 0
Query:   22 LGFLSLVALLSWMCPQFISQAHAATAFVGGAGSGSFGSRISRGTRRTQGQTTMLASARRSRSTRPLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVE 426
            +G  S+ +LL  + P      H   AFV    S    +R+S         T    S+ + ++  P PYPVR AV+GGG+FGLAL+S+  +K  P TILVR++++A+ IN +H HP Y+ D+   PT+RATT P++ L DA++I+HAVPVQYSRKFL  +  ++P  TP++S SKGIET +L  M DIL ETLG  R  A+LSGPSFAREI  G+ TAVV ASE   LA ++  ++    FRVFTS DV+GVE+GGAVKNVIA+AAGMCEGLGLGTNAM+ LVTRGC EM+RL L+LGARP+T+ GLSGVGDTFGTCFGPLSRNR  G RLGKGE +E+IL SS+EVAEG  T+ +LV  I++  + YR +L++PI++GV +IL+GK TP +GL+ +M MP  +E
Sbjct:    1 MGLYSVFSLLIALHPFLY---HGVNAFV--QRSDLISTRLS--------TTAFTRSSLQMQANSPPPYPVRIAVMGGGNFGLALSSISARKGFPTTILVREQEIADSINTNHTHPRYMRDVKFPPTLRATTNPQDCLPDATYIVHAVPVQYSRKFLNSVKEYIPPGTPVLSGSKGIETSSLGFMADILKETLGEERPYAFLSGPSFAREICDGVATAVVIASEDLLLARDLATLLSDGNFRVFTSRDVIGVEIGGAVKNVIALAAGMCEGLGLGTNAMSGLVTRGCGEMRRLGLTLGARPSTIAGLSGVGDTFGTCFGPLSRNRQFGYRLGKGETMEEILASSSEVAEGVDTSIALVNFIKQNCKGYRLDLKYPILFGVADILQGKLTPLDGLKGIMNMPFLME 391          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: EJK77600.1 (hypothetical protein THAOC_00555 [Thalassiosira oceanica])

HSP 1 Score: 425.6 bits (1093), Expect = 1.800e-115
Identity = 228/427 (53.40%), Postives = 299/427 (70.02%), Query Frame = 0
Query:   17 YATFTLGFLSLVALL-------SWMCPQFISQAHAATAFVGG------AGSGSFGSRISRGTRRTQGQTTMLASARRSRSTR--PLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEMWN 429
            Y   +L  L+++A+L       S     F+  + ++   + G       G    G   +R  RR  G T   AS   + S+R  P P+PVR  V+GGG+FGLALASV+ K+ +P T+LVR +DVA  IN  HRHPTY+SDI+L  T+RATT    AL DA++IIHAVPVQY+R+FL  +A ++P N P++S SKGIET +L  M DIL + LG +R  A+LSGPSFAREI  G+ TAVV ASE   LA+++ ++M    F VFTS DV+G+EVGGAVKNVIAIAAGMCEGLGLGTNA++ LVTRGC EM+RL + LGARP+T++GLSGVGDTFGTCFGPLSRNR  G RLG+GE  E+I  S TEVAEG  T+ +LV++I++  + YR +L++PI++GV EI+EG   P EGL+ LM  P R+E ++
Sbjct:   60 YPASSLRHLAMIAILLLFTIDTSVEAFTFVKPSRSSAVHIRGHHGITKRGDSIRGLECARSGRRIPGGTRRRASGALAMSSRSGPPPFPVRITVMGGGNFGLALASVVAKRGVPTTLLVRSDDVARSINEKHRHPTYMSDIALPRTVRATTNKASALGDATYIIHAVPVQYTRQFLRSVAEYIPPNVPVLSASKGIETSSLGFMADILRDCLGEDRSYAFLSGPSFAREICEGVATAVVIASEDIMLADDLAELMAGEDFAVFTSRDVIGIEVGGAVKNVIAIAAGMCEGLGLGTNALSGLVTRGCGEMRRLGIYLGARPSTISGLSGVGDTFGTCFGPLSRNRQFGYRLGRGETAEEIRASMTEVAEGVDTSIALVKMIKERCKGYRLDLKYPILFGVAEIIEGNMKPLEGLKGLMNFPTRMENYD 486          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: XP_002177310.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51773.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 423.3 bits (1087), Expect = 8.900e-115
Identity = 212/344 (61.63%), Postives = 266/344 (77.33%), Query Frame = 0
Query:   82 RSTRPLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVE 426
            +++ P PYPVR  V+GGG+FGLALA+V  +K IP T+LVR +D+A+ IN +H HP Y+ DI L   IRAT+ PE+AL+DA++I+HAVPVQYSR FL+ +   +  NTP++S SKGIET +L  M DIL E+LG +R  A+LSGPSFAREI  G+ TAVV ASE   LA ++ D++  + FR FTS DV+GVE+GGAVKNVIA+AAGMCEGLGLGTNAM+ LVTRGC EM+RL L+ GARP+T+ GLSGVGDTFGTCFGPLSRNR  G RLGKGE +E+I  SSTEVAEG  TA +LV LI+   + YR +L+FPI++GV  ILEG  TP EGL  +M MP ++E
Sbjct:    2 KASSPPPYPVRITVMGGGNFGLALATVAARKGIPTTLLVRSDDIAQSINTNHTHPRYMKDIVLPARIRATSDPEKALSDATYIVHAVPVQYSRAFLDSVKEFIAPNTPVLSGSKGIETSSLGFMADILKESLGRDRPYAFLSGPSFAREICEGVATAVVVASEDLMLARDLADLLSDDNFRCFTSRDVMGVEIGGAVKNVIALAAGMCEGLGLGTNAMSGLVTRGCGEMRRLGLTFGARPSTIAGLSGVGDTFGTCFGPLSRNRKFGYRLGKGETMEEIKASSTEVAEGVDTAIALVNLIKTECKGYRLDLKFPILFGVAAILEGNLTPREGLIGIMNMPFQME 345          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: XP_002286719.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED96360.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 422.9 bits (1086), Expect = 1.200e-114
Identity = 211/346 (60.98%), Postives = 267/346 (77.17%), Query Frame = 0
Query:   83 STRPLPYPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEMWN 429
            +T+P PYPVR  VLGGG+FGLALA+V+ KK +P T+LVR EDVA HIN +HRHP Y+SDI L   +RAT   + AL+DA++IIHAVPVQY+R+FL  +   +P N P++S SKGIET +L  M DIL E LG +R  A+LSGPSFAREI  G+ TAVV ASE   LA+++ D+M    F VFTS DV+GVEVGGAVKNVIAIAAGMCEGLGLGTNAM+ LVTRGC EM+RL + LGARP+T++GLSGVGDTFGTCFGPLSRNR  G RLGKGE   +I  S TEVAEG  T+ +LV++I++  + YR +L++PI++G+ +I+EG   P EG++ LM  P R+E ++
Sbjct:    7 NTQPPPYPVRVTVLGGGNFGLALATVVAKKGVPTTLLVRSEDVASHINENHRHPRYMSDICLPRMVRATCDKKSALSDATYIIHAVPVQYTREFLNSVKDDIPPNVPVLSASKGIETSSLGFMADILKECLGEDRSYAFLSGPSFAREICEGVATAVVIASEDLMLADDLADLMSGEDFAVFTSRDVIGVEVGGAVKNVIAIAAGMCEGLGLGTNAMSGLVTRGCGEMRRLGIYLGARPSTISGLSGVGDTFGTCFGPLSRNRRFGYRLGKGETAAEIRESMTEVAEGVDTSIALVKMIKERCKGYRLDLKYPILFGMADIIEGNMKPMEGMKALMNFPTRMENYD 352          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: OEU20796.1 (NAD-dependent glycerol-3-phosphate dehydrogenase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 405.6 bits (1041), Expect = 1.900e-109
Identity = 202/338 (59.76%), Postives = 258/338 (76.33%), Query Frame = 0
Query:   89 YPVRFAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGL-VTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVE 426
            YP+R AV+GGG+FGLA+ ++  ++  P TILVR E++A+ IN  HRHP Y+  I L   +RAT+ P E L DA++IIHAVP QYSR FLE +   +P  TPI+S SKGIET ++  M D++ + LG +R  A+LSGPSFAREI  GL  TAVV ASE   LA ++  ++    F+ FTSTDV+GVE+GGAVKNVIA+ AGMCEGLGLGTNAM+ LVTRGCNEM+RL L+ GARP+T+ GLSGVGDTFGTCFGPLSRNR  G RLGKGE +E+IL S++EVAEG  TA ++V+LIEK  + YR +L++PI++G+  ILEGK TP EGL  LM MP+++E
Sbjct:   10 YPIRIAVMGGGNFGLAMGTLCARQGYPTTILVRDEEIAQTINSEHRHPRYMQGIELPTGLRATSDPNECLPDATYIIHAVPCQYSRGFLESVKDFIPAQTPILSVSKGIETSSMGFMADLIKDVLGEDRPLAFLSGPSFAREIVEGLGATAVVIASEDLDLARDLAALISDGRFKCFTSTDVIGVEIGGAVKNVIALGAGMCEGLGLGTNAMSGLVTRGCNEMRRLGLTFGARPSTIAGLSGVGDTFGTCFGPLSRNRKFGYRLGKGETMEEILASTSEVAEGVDTALAVVRLIEKECKGYRLDLKYPILFGIARILEGKSTPLEGLELLMNMPMQME 347          
BLAST of NO17G02030 vs. NCBI_GenBank
Match: CEM03367.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 376.7 bits (966), Expect = 9.500e-101
Identity = 194/334 (58.08%), Postives = 245/334 (73.35%), Query Frame = 0
Query:   93 FAVLGGGSFGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRATTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETGTLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALANEICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMAALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEM 427
            F VLGGG+FGLALA +LG+K IP TIL+R ++ AE IN   RHP YLSD     ++RATT   +AL D + I+HAVPVQ+SR  L +I+  +P N P++S SKGIE  TL +M DIL ETLG NR  A+LSGPSFAREI  GL T VV AS  + LA E+ +I+    F+VFTS DV+GVE+GGAVKNV+AIAAGMCEGL LGTNA++ +VT G  EM+R    +GA+ +T +GLSG GD FGTCFGPLSRNR  GVRLG+GEK+EDIL SS+EVAEG ATA +LV+LI+     YR +L++PI++ + EI+ G  TP EGL ++M     V+M
Sbjct:  123 FTVLGGGNFGLALAWLLGQKKIPTTILLRSQEYAECINTERRHPKYLSDARFPESVRATTDAADALKDVTHIVHAVPVQFSRATLNNISHLIPPNVPVLSVSKGIEANTLSLMSDILEETLGKNRSYAFLSGPSFAREIVRGLATGVVVASTDKRLARELQNILRGEMFQVFTSNDVIGVEIGGAVKNVLAIAAGMCEGLDLGTNAISGIVTSGAMEMRRFGRKMGAKASTFSGLSGAGDLFGTCFGPLSRNRAFGVRLGRGEKVEDILASSSEVAEGVATATALVELIKAKEGGYRIDLKYPIMFAIAEIISGHLTPREGLEEVMKGNSLVDM 456          
The following BLAST results are available for this feature:
BLAST of NO17G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24210.11.500e-19485.19glycerol-3-phosphate dehydrogenase [Nannochloropsi... [more]
XP_005829771.12.000e-12769.67hypothetical protein GUITHDRAFT_73617 [Guillardia ... [more]
CBJ31247.13.200e-12064.04Glycerol-3-phosphate dehydrogenase [Ectocarpus sil... [more]
GAX09887.11.200e-11659.32hypothetical protein FisN_11Lh132 [Fistulifera sol... [more]
GAX14409.11.000e-11554.95hypothetical protein FisN_11Hh132 [Fistulifera sol... [more]
EJK77600.11.800e-11553.40hypothetical protein THAOC_00555 [Thalassiosira oc... [more]
XP_002177310.18.900e-11561.63predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002286719.11.200e-11460.98predicted protein, partial [Thalassiosira pseudona... [more]
OEU20796.11.900e-10959.76NAD-dependent glycerol-3-phosphate dehydrogenase [... [more]
CEM03367.19.500e-10158.08unnamed protein product [Vitrella brassicaformis C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002984NSK002984Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02030.1NO17G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545497gene_7684Nannochloropsis oceanica (N. oceanica CCMP1779)gene
GPDgene6262Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02030.1NO17G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02030 ID=NO17G02030|Name=NO17G02030|organism=Nannochloropsis oceanica|type=gene|length=1560bp
ATGACACCCTCAACCACCAGAAGAGTCAATGCAATAACCTTGCCGCAATA
TGCCACATTCACGTTGGGTTTCCTCTCACTGGTTGCCTTGTTGAGCTGGA
TGTGTCCGCAATTCATCTCCCAGGCTCATGCCGCGACGGCGTTTGTTGGG
GGGGCTGGAAGTGGGAGCTTTGGGAGCAGGATTTCGAGGGGCACCCGACG
TACACAGGGACAGgtatggaaagaggaacacaaagggagaggggtaagaa
aaaattaacatcgtcttgtcttgtctcttttgaatgcaccctcggggggg
ctatctacccagccctctaacctccccccttcccactctcccattccccc
ttctttcacttcaacacctgctcagACTACCATGCTAGCTTCTGCGCGAA
GAAGTCGTTCTACCCGTCCCTTGCCCTACCCCGTCCGCTTTGCCGTGCTC
GGCGGTGGGTCTTTCGGCCTGGCCCTTGCCTCTGTCTTGGGGAAGAAAAG
CATTCCAGTCACTATCCTGGTGCGGAAAGAAGACGTGGCCGAGCACATCA
ATTTGCATCATCGTCACCCTACCTATCTTTCGGATATCTCATTGGCTCCC
ACGATTCGCGCGACTACCATTCCAGAGGAGGCCTTAAATGATGCGTCCTT
CATTATTCATGCGGTACCGGTGCAGTATTCTAGAAAGTTTTTGGAGGACA
TTGCGCCGCATGTCCCAAAGAACACGCCGATTATCTCGACGAGCAAGgtg
agctatctttgttggttttcctctctctgttattcgttcctttttgtggg
ccgtctaaacctcatcctccctccctccctcccctcttgtcctcctcctt
tacagGGCATAGAAACCGGCACCCTCTGCATGATGCAAGACATCCTTCTA
GAGACTCTTGGCCCAAACCGCGAGACTGCCTACCTGTCTGGGCCCTCCTT
TGCGCGTGAAATCGCCTTGGGGCTGGTCACTGCTGTCGTGGCCGCCAGTG
AGAGCGAGGCGCTCGCCAACGAGATATGCGACATCATGGGCTGCAACTAC
TTCCGTGTTTTCACCTCCACCGACGTGGTGGGTGTCGAGGTAGGGGGAGC
TGTCAAGAACGTGATTGCCATTGCCGCTGGGATGTGTGAGGGCCTGGGGC
TGGGCACCAATGCAATGGCTGCTTTGGTGACCAGAGGATGCAACGAGATG
CAGCGCCTGGCCTTGAGCCTAGGCGCACGGCCCACCACCTTGACGGGACT
CTCCGGGGTAGGGGATACGTTCGGGACGTGCTTTGGCCCCTTGAGCAGAA
ATCGGAATTTAGGAGTAAGGCTGGGGAAAGGAGAGAAGTTGGAGGATATA
TTAGGGTCGTCAACAGAGGTGGCGGAGGGACACGCCACGGCCTTTTCTCT
GGTACAATTGATTGAGAAGACCAATCGGGCTTACAGGAGGGAGCTTGAGT
TTCCGATTATATATGGGGTAAAGGAGATTTTGGAGGGAAAGAGGACGCCC
GCAGAGGGTTTGAGAGACTTAATGGCCATGCCTGTGAGGGTGGAGATGTG
GAATTTGTAG
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protein sequence of NO17G02030.1

>NO17G02030.1-protein ID=NO17G02030.1-protein|Name=NO17G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MTPSTTRRVNAITLPQYATFTLGFLSLVALLSWMCPQFISQAHAATAFVG
GAGSGSFGSRISRGTRRTQGQTTMLASARRSRSTRPLPYPVRFAVLGGGS
FGLALASVLGKKSIPVTILVRKEDVAEHINLHHRHPTYLSDISLAPTIRA
TTIPEEALNDASFIIHAVPVQYSRKFLEDIAPHVPKNTPIISTSKGIETG
TLCMMQDILLETLGPNRETAYLSGPSFAREIALGLVTAVVAASESEALAN
EICDIMGCNYFRVFTSTDVVGVEVGGAVKNVIAIAAGMCEGLGLGTNAMA
ALVTRGCNEMQRLALSLGARPTTLTGLSGVGDTFGTCFGPLSRNRNLGVR
LGKGEKLEDILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGV
KEILEGKRTPAEGLRDLMAMPVRVEMWNL*
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Synonyms
Publications