NO17G01980, NO17G01980 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01980
Unique Name	NO17G01980
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3539
Alignment location	chr17:563906..567444 -

Link to JBrowse

Properties


Property Name	Value
Description	Double-strand-break repair protein rad21 homolog

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:563906..567444 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0000228	nuclear chromosome
GO:0008278	cohesin complex

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR006910	Rad21_Rec8_N
IPR006909	Rad21/Rec8_C_eu

Vocabulary: **Biological Process**
Term	Definition
GO:0007062	sister chromatid cohesion

Homology

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: XP_002902993.1 (double-strand-break repair protein rad21 [Phytophthora infestans T30-4] >EEY56163.1 double-strand-break repair protein rad21 [Phytophthora infestans T30-4])

HSP 1 Score: 197.6 bits (501), Expect = 1.300e-46
Identity = 118/255 (46.27%), Postives = 144/255 (56.47%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNALPIADQWVAAATQTLARRERITLHD--EGGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPG+VDLP    +A   SINV NFG+F+ ++                                   A P  D+W+AA++QTLARR+ ITL D  +  RE      R ++     F      EDW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGVVDLPANNQQAASHSINVSNFGEFEAEV----------------------------TYSIEAIAAPSLDEWIAASSQTLARRQDITLADPLDKVREANGFAERDVIAMEDSFGGGE--EDWQAFD-LDDNFGSSGL------------DISAVSDVEMAREAD 212

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: ETI31600.1 (hypothetical protein F443_21455 [Phytophthora parasitica P1569] >ETL78631.1 hypothetical protein L917_20595 [Phytophthora parasitica] >ETM31892.1 hypothetical protein L914_20613 [Phytophthora parasitica] >ETO60318.1 hypothetical protein F444_21473 [Phytophthora parasitica P1976])

HSP 1 Score: 195.3 bits (495), Expect = 6.600e-46
Identity = 117/257 (45.53%), Postives = 148/257 (57.59%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNAL--PIADQWVAAATQTLARRERITLHD--EGGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A   +INV NFG+F+ ++                                +++A+  P  D+W+AA++QT+ARR+ ITL D  +  RE      R ++     F  E    DW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHTINVSNFGEFEAEV------------------------------TYSIDAITAPSLDEWIAASSQTVARRQDITLADPLDRTREANGFAERDVIAMEDSFGGE---GDWQAFD-LDDNFGSSGL------------DISTVSDVEIAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: ETL25404.1 (hypothetical protein L916_20746 [Phytophthora parasitica])

HSP 1 Score: 195.3 bits (495), Expect = 6.600e-46
Identity = 117/257 (45.53%), Postives = 148/257 (57.59%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNAL--PIADQWVAAATQTLARRERITLHD--EGGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A   +INV NFG+F+ ++                                +++A+  P  D+W+AA++QT+ARR+ ITL D  +  RE      R ++     F  E    DW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHTINVSNFGEFEAEV------------------------------TYSIDAITAPSLDEWIAASSQTVARRQDITLADPLDRTREANGFAERDVIAMEDSFGGE---GDWQAFD-LDDNFGSSGL------------DISTVSDVEIAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: ETP29585.1 (hypothetical protein F442_21293 [Phytophthora parasitica P10297])

HSP 1 Score: 195.3 bits (495), Expect = 6.600e-46
Identity = 117/257 (45.53%), Postives = 148/257 (57.59%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNAL--PIADQWVAAATQTLARRERITLHD--EGGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A   +INV NFG+F+ ++                                +++A+  P  D+W+AA++QT+ARR+ ITL D  +  RE      R ++     F  E    DW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHTINVSNFGEFEAEV------------------------------TYSIDAITAPSLDEWIAASSQTVARRQDITLADPLDRTREANGFAERDVIAMEDSFGGE---GDWQAFD-LDDNFGSSGL------------DISTVSDVEIAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: KUG01394.1 (Double-strand-break repair protein rad21 [Phytophthora nicotianae])

HSP 1 Score: 195.3 bits (495), Expect = 6.600e-46
Identity = 117/257 (45.53%), Postives = 148/257 (57.59%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNAL--PIADQWVAAATQTLARRERITLHD--EGGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A   +INV NFG+F+ ++                                +++A+  P  D+W+AA++QT+ARR+ ITL D  +  RE      R ++     F  E    DW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHTINVSNFGEFEAEV------------------------------TYSIDAITAPSLDEWIAASSQTVARRQDITLADPLDRTREANGFAERDVIAMEDSFGGE---GDWQAFD-LDDNFGSSGL------------DISTVSDVEIAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: XP_008898334.1 (hypothetical protein PPTG_06198 [Phytophthora parasitica INRA-310] >ETN15936.1 hypothetical protein PPTG_06198 [Phytophthora parasitica INRA-310])

HSP 1 Score: 194.1 bits (492), Expect = 1.500e-45
Identity = 117/257 (45.53%), Postives = 147/257 (57.20%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNAL--PIADQWVAAATQTLARRERITLHDE--GGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A   +INV NFG+F+ ++                                +++A+  P  D+W+AA++QT+ARR+ ITL D     RE      R ++     F  E    DW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHTINVSNFGEFEAEV------------------------------TYSIDAITAPSLDEWIAASSQTVARRQDITLADPLVRTREANGFAERDVIAMEDSFGGE---GDWQAFD-LDDNFGSSGL------------DISTVSDVEIAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: ETK71977.1 (hypothetical protein L915_20862 [Phytophthora parasitica])

HSP 1 Score: 193.0 bits (489), Expect = 3.300e-45
Identity = 117/257 (45.53%), Postives = 146/257 (56.81%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNAL--PIADQWVAAATQTLARRERITLHDE--GGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A    INV NFG+F+ ++                                +++A+  P  D+W+AA++QT+ARR+ ITL D     RE      R ++     F  E    DW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHIINVSNFGEFEAEV------------------------------TYSIDAITAPSLDEWIAASSQTVARRQDITLADPLYRTREANGFAERDVIAMEDSFGGE---GDWQAFD-LDDNFGSSGL------------DISTVSDVEIAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: ETP01414.1 (hypothetical protein F441_21344 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 193.0 bits (489), Expect = 3.300e-45
Identity = 117/257 (45.53%), Postives = 146/257 (56.81%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNAL--PIADQWVAAATQTLARRERITLHDE--GGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SI++P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A    INV NFG+F+ ++                                +++A+  P  D+W+AA++QT+ARR+ ITL D     RE      R ++     F  E    DW  FD LD+  G                D    SDVE+ R+AD
Sbjct:    1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSILNPQVPLALRVSGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGIVDLPANNQQAASHIINVSNFGEFEAEV------------------------------TYSIDAITAPSLDEWIAASSQTVARRQDITLADPLYRTREANGFAERDVIAMEDSFGGE---GDWQAFD-LDDNFGSSGL------------DISTVSDVEIAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: XP_024584587.1 (double-strand-break repair protein rad21 [Plasmopara halstedii] >CEG48218.1 double-strand-break repair protein rad21 [Plasmopara halstedii])

HSP 1 Score: 191.0 bits (484), Expect = 1.200e-44
Identity = 114/257 (44.36%), Postives = 148/257 (57.59%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNALPI--ADQWVAAATQTLARRERITLHD--EGGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV SIV+P VPLALRVSGHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPGIVDLP    +A   +INV NFG+F+ ++                                ++ ++P+   D+W+AA++QT+A+R+ ITL D  +  R       R ++     F  E    DW  FD L++  G            S   D    SD+E+ R+AD
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYSDCSEALVKIKLAFRPGIVDLPANNQQASSHAINVSNFGEFEAEV------------------------------TYSIESIPVPSLDEWIAASSQTMAKRQDITLADSLDLHRGSNAFAERDVIAMEDSFGNE---GDWHAFD-LEDNFG------------SSGMDMSTVSDIEVAREAD 211

[Close]

BLAST of NO17G01980 vs. NCBI_GenBank
Match: POM64421.1 (Double-strand-break repair protein rad21 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 190.3 bits (482), Expect = 2.100e-44
Identity = 113/255 (44.31%), Postives = 144/255 (56.47%), Query Frame = 0

Query:    1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGASEAPLASINVQNFGQFDQDLLDFAAFQGGRXXXXXXXXXXXXXXXXXXXXXSTLNALPIADQWVAAATQTLARRERITLHD--EGGREGXXXXGRGLLEQSSMFDPEVELEDWGPFDPLDETMGGRXXXXXXXGETSFEDDSGRYSDVELGRDAD 254
            MF++  +L KKGPLGK+WLAAHWDKKL K Q+F  DI  SV++I++P VPLALRV+GHLLLGVVRIYSRKVKYL  DCS+AL KIK+AFRPG VDLP    +A   +INV NFG+F+ ++                                   A+P  D+W+AA++QT+ARR+ ITL D  +  RE      R  +     F  E    DW  FD LD+  G                D    SD+E+ R+AD
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHTSVENIMNPQVPLALRVTGHLLLGVVRIYSRKVKYLYTDCSEALVKIKLAFRPGAVDLPASNQQAASHTINVSNFGEFEAEV----------------------------TYSIDAIAVPSLDEWIAASSQTMARRQDITLADPLDRIREENAFAERDAIAMEDSFGGE---GDWHAFD-LDDNFGNSGL------------DISTVSDIEVAREAD 211

The following BLAST results are available for this feature:

BLAST of NO17G01980 vs. NCBI_GenBank

BLAST of NO17G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_002902993.1	1.300e-46	46.27	double-strand-break repair protein rad21 [Phytopht...	[more]
ETI31600.1	6.600e-46	45.53	hypothetical protein F443_21455 [Phytophthora para...	[more]
ETL25404.1	6.600e-46	45.53	hypothetical protein L916_20746 [Phytophthora para...	[more]
ETP29585.1	6.600e-46	45.53	hypothetical protein F442_21293 [Phytophthora para...	[more]
KUG01394.1	6.600e-46	45.53	Double-strand-break repair protein rad21 [Phytopht...	[more]
XP_008898334.1	1.500e-45	45.53	hypothetical protein PPTG_06198 [Phytophthora para...	[more]
ETK71977.1	3.300e-45	45.53	hypothetical protein L915_20862 [Phytophthora para...	[more]
ETP01414.1	3.300e-45	45.53	hypothetical protein F441_21344 [Phytophthora para...	[more]
XP_024584587.1	1.200e-44	44.36	double-strand-break repair protein rad21 [Plasmopa...	[more]
POM64421.1	2.100e-44	44.31	Double-strand-break repair protein rad21 [Phytopht...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL156	nonsL156	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR035	ncniR035	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR028	ngnoR028	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002980	NSK002980	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO17G01980.1	NO17G01980.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|632426	gene_7690	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100020g2	gene6256	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO17G01980.1	NO17G01980.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO17G01980 ID=NO17G01980|Name=NO17G01980|organism=Nannochloropsis oceanica|type=gene|length=3539bp
GCGGGAATGATGGGGGGAGCTGCTTTTGCGCGGGAAGCCCAATTTAGGTC
GACTTAGGCAGGGTAATGACATTCTACACAAGCATTTCTAGTTACAGGCA
TTGTCTACATCGTGCGCAAGACAAGCAGGGGGGTGGCAGGCAGTGCCAAT
GCTCAGTGTATTCCAATTGATTATGAGAAATGGAGGGGGGAGGCAAAAAG
GGAGGTGCAGGGCCCGCCAGGACGAAACGCCCACACGACTGCAACACGAC
ACTCATCGGCAGCACAAGCAAACACAGGGGCACTCTTATCAATGCATGAA
GATATTTCGGTAGCTTCCGTAGGAGAAGGCGCGTCGCGGCGGGTGAAGCG
TCCTTTTGGGCTTGCGTCGACTTTCCCGCCCCGGCTTACGCTGTCCTTTT
CATTCTACCCTCCCGTTCCATCCAGCACAGAAGTCGACATAAAGCGCCAA
GCCCACGTCCACATAGGCTCGGCTCATCGCACACCTCACATGGAGGAGGA
GAGGGAGGGTTCGCAGCTTCCTACCTGGCGCCTTTGCGCACGCAAATGCA
TCCCTCCTTACCCTCCTCCTGCCCCCTCAGCGGAGCCTGGCTAACCGTAC
AACGTATTCACACTCAGTATGTCTCACACATAAATACGCACCCATTGCAC
TACAGGCAGCAGCACTGCGAGACCGAACAGCACTAGCCGGCTTTCGAAGT
AGCGCCGGCCCTTGCCCTCCGCTTCTTTCTTCTCTCAAGCAGGACCTGCA
CCGGTACTTACCGCCCTTCCCACCCCAGCACCATGTTCTTCGCCTCGAGC
CTCCTGACAAAGAAGGGGCCTCTAGGCAAGGTCTGGCTGGCGGCTCATTG
GGACAAAAAGCTGACCAAAATGCAGGTTTTCCAGACAGACATCACCAAGT
CCGTTGgtacgtacccctccctacctccttccgttcctcctgccctccct
ctctcctccgtcccccctctctcattgagagactaaatttcggcagtcat
ctccttctaccaacgactcttatgttcttctttctccatccttgtggtct
tgttcctcctgtcattccctacctcctgtcaccagctccctttcctccct
ccccccctccctccctccagACTCCATTGTCCATCCCACCGTCCCCCTCG
CCCTCCGCGTCTCCGGCCACCTCCTCCTTGGCGTGGTCCGCATTTACTCC
CGCAAAGTAAAGTACCTGATGGAGGACTGCTCCCAGGCCTTGACCAAGAT
CAAGATGgtacgtgccctccaccccgccttccttacctccctccccctct
cgtcccctggcgatccatttcttgagacttgtgtctcgatccgtccctcc
tttccttcgttccttccctcccctctcccctgatttcctccagtacgcct
tttgtccgggcatgggggccatgtctagaggggcttctgtctcgattgca
tcaacgaccaatacctagtccactcatttgacccctccctgcctccctgc
ctgcctgccttcctccctccctccctcctcttgctatagGCCTTTCGTCC
GGGTATCGTTGACCTGCCCATAGGCGCCTCGGAGGCACCGCTGGCCTCGA
TCAACGTCCAAAACTTCGGTCAGTTCGACCAGGACCTGCTGGACTTCGCG
GCCTTCCAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGTGTTTGGAGGTGG
GGGATTTGAGGGAGGGGTGGAGGGAGGATTGTCGACGTTGAATGCATTGC
CGATAGCAGATCAGTGGGTGGCGGCGGCCACGCAGACGCTGGCGAGAAGG
GAGAGGATTACCTTGCACGATGAGGGAGGGAGGGAGGGAGGGGGGGAGGG
AGGGAGAGGTTTGTTGGAACAGAGTTCAATGTTCGACCCGGAGGTGGAGT
TGGAGGACTGGGGTCCCTTCGATCCCTTGGATGAGACGATGGGAGGGAGG
GAGGGAGGGGTTGAAGGAGGGGGGGAGACAAGTTTCGAGGATGACAGTGG
GAGGTACAGCGACGTCGAGTTGGGGCGAGACGCGGACGGGAGTCGGAGGC
GGTCGTCCTTGAAGAGGGGGAGGGCGAGTTTGGAGGTGGGGGAGGCAGGG
AAAGAGGGAGGGAAGGAGAGAGTGTCGGATTACGGGATGGGAGGGAAAGA
GGGAGGAAGGGAGGGGGGGGAGGAGCCGTATTATGAGGAGCCGGGTGACA
TGATGTTCATGCAGGATGATATGCCGCCACCCATGGAGGAGGAGGAGTTG
GAGAAAGAGGGGACGGAAGGGGAGGGATGGAGGGAGGGAGCGCGGGGAGG
GGGGTCGTTTGGATTGTCGGACTTGTCGTTCGGAGATTCCATGGAGGGAG
GAGGACGAGAAGCAGCACGAGCAGCAGCAGCGGCGGAGGACGAGATGGTG
ATGCTGGGACCGGACAGCCAAATGAAGCAACAGCAGCAGCAGCAGCAGCG
GAAGAAGAAGAAGCCGCGGCTGTTGCGGTTGGACGCCACTACCATTTTGT
CGACTGCTCAGATCAAAGCCCAGCTGCAGGAGTACCACGACATCTGCTTG
CCTCGCGTCCGACCCCGCGACCGGGTCCGCCGGGCAGGAAGGCGGGAGGG
AGGGCGGGCGGGGAGGGCGGCGGCGATGGAGGCAGTGGAGCTTCGGATGA
AGGTGCCGACGTTGGAGGGACTGTCTGAGGACCTCCGGGAGGTGTTCCGA
TTGACGATGGTGGTTGGGGAGATGACAGAGATGGGGGTGGCGAAGAGGGC
GGAGGGAGGGAGGGGAGAAGGAGGGGAAATTGAGCAGACGCGAGCCGGGG
AGGGAGGGAGGAGGGAGACGGTAGAGGAAGAGGGAAGGGATTCGCTGCTG
TTGGCGGGGGAGGCGGTCGGGAGGATGAGCAAGGGGATGGAGGAAAGGGA
AGAGGGGGGAGGGGAAGGGATGAGGACGGGATGGAGGGGAGATGAGGAGA
TGATGATGATGCAGGACGGGGATGATTTTCGGATGGACGATGAGGAGTAC
TTGCCGCTTCCTCCTTCCTCGGAAGGAGGGGAGGAGGAGGGAGCTTTCCA
GCCGCCATCGGTGAGCAAGCGTCGATCTAGTGGGATGGGGTTTGAGGAGG
ATGTGATGATGGGCATGGAGGCGAAGGGGGAGGGGGGGAGGAGGACGAGG
AAGAAGAAGgtgggattaaggcgcgcttgcgtcagcctcgagggcagggc
gaggtggaggaagaggtaaactttgtgtggcaccccaacacggtcaagAT
TCTGACCTTCCTCCGCCGGCAGCTCAGGGGGAAGGAGGGGAGGAAGAGGG
GAGTGACGCTGCAAACGTTGGCAGCGGAGGCATCGAGGGCGAACGTGGCC
AAGTTCTTTTGGGAGCTGCTGCAGTTGAAGACGTGGGATTTTGTGCAGTT
GGAGCAGCGAATGGCGTACGGGGATATCATTATCTTGCCGGGGAGGCGGT
TTCGAGAGGCGATTAAGGTGGAGAGGGAGGAGGAGGAGGAGGAGCAGGAG
GAGAGAGGCCCAGAGGAGGAGGAAAGTGTGGCGGCGTAG

protein sequence of NO17G01980.1

>NO17G01980.1-protein ID=NO17G01980.1-protein|Name=NO17G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=724bp
MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVP
LALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPIGA
SEAPLASINVQNFGQFDQDLLDFAAFQGGREGGREGVFGGGGFEGGVEGG
LSTLNALPIADQWVAAATQTLARRERITLHDEGGREGGGEGGRGLLEQSS
MFDPEVELEDWGPFDPLDETMGGREGGVEGGGETSFEDDSGRYSDVELGR
DADGSRRRSSLKRGRASLEVGEAGKEGGKERVSDYGMGGKEGGREGGEEP
YYEEPGDMMFMQDDMPPPMEEEELEKEGTEGEGWREGARGGGSFGLSDLS
FGDSMEGGGREAARAAAAAEDEMVMLGPDSQMKQQQQQQQRKKKKPRLLR
LDATTILSTAQIKAQLQEYHDICLPRVRPRDRVRRAGRREGGRAGRAAAM
EAVELRMKVPTLEGLSEDLREVFRLTMVVGEMTEMGVAKRAEGGRGEGGE
IEQTRAGEGGRRETVEEEGRDSLLLAGEAVGRMSKGMEEREEGGGEGMRT
GWRGDEEMMMMQDGDDFRMDDEEYLPLPPSSEGGEEEGAFQPPSVSKRRS
SGMGFEEDVMMGMEAKGEGGRRTRKKKILTFLRRQLRGKEGRKRGVTLQT
LAAEASRANVAKFFWELLQLKTWDFVQLEQRMAYGDIIILPGRRFREAIK
VEREEEEEEQEERGPEEEESVAA*

Synonyms

Publications