NO17G01950, NO17G01950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01950 vs. NCBI_GenBank
Match: XP_005852713.1 (phosphatidylinositol glycan, class M [Nannochloropsis gaditana CCMP526] >EKU23122.1 phosphatidylinositol glycan, class M [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 263.5 bits (672), Expect = 7.100e-67 Identity = 143/243 (58.85%), Postives = 174/243 (71.60%), Query Frame = 0 Query: 13 SPIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHPAWGKVLFIASDLVVGLLVMRISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSARPAEVDEEDRKTRLFWRRLKMVIDKECILFTVTLKAKLVG 256 S + VF AL +R+GML VGAW+DRASS+VKYTDIDY VFSDAARFL GGSPYERDTYRYTPFLA L+LPNLWLHPAWGKVLF+ DL+VG L+M+IS+ + + G AA S P+L+A+ WL NPLVIN STRGSAD+LVSALVLATVL VQQNRP+LA FHGAAVHFK+YPI+FS S+LAAL + + + +D WR + ++ +LF+V +G Sbjct: 12 STVSVFVGALLIRLGMLAVGAWIDRASSTVKYTDIDYFVFSDAARFLSDGGSPYERDTYRYTPFLAYLLLPNLWLHPAWGKVLFVIFDLLVGFLIMKISSQYKVANNTPLKIQPMNGFSSFFAA---SPPVLYASFWLYNPLVINCSTRGSADSLVSALVLATVLLVQQNRPILAAAFHGAAVHFKVYPIIFSFSYLAALPES-DTDGEGQDLTPIGSWRSVWPFSTRKRLLFSVVSALTFLG 250
BLAST of NO17G01950 vs. NCBI_GenBank
Match: EWM24230.1 (gpi mannosyltransferase 1 [Nannochloropsis gaditana]) HSP 1 Score: 263.5 bits (672), Expect = 7.100e-67 Identity = 143/243 (58.85%), Postives = 174/243 (71.60%), Query Frame = 0 Query: 13 SPIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHPAWGKVLFIASDLVVGLLVMRISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSARPAEVDEEDRKTRLFWRRLKMVIDKECILFTVTLKAKLVG 256 S + VF AL +R+GML VGAW+DRASS+VKYTDIDY VFSDAARFL GGSPYERDTYRYTPFLA L+LPNLWLHPAWGKVLF+ DL+VG L+M+IS+ + + G AA S P+L+A+ WL NPLVIN STRGSAD+LVSALVLATVL VQQNRP+LA FHGAAVHFK+YPI+FS S+LAAL + + + +D WR + ++ +LF+V +G Sbjct: 12 STVSVFVGALLIRLGMLAVGAWIDRASSTVKYTDIDYFVFSDAARFLSDGGSPYERDTYRYTPFLAYLLLPNLWLHPAWGKVLFVIFDLLVGFLIMKISSQYKVANNTPLKIQPMNGFSSFFAA---SPPVLYASFWLYNPLVINCSTRGSADSLVSALVLATVLLVQQNRPILAAAFHGAAVHFKVYPIIFSFSYLAALPES-DTDGEGQDLTPIGSWRSVWPFSTRKRLLFSVVSALTFLG 250
BLAST of NO17G01950 vs. NCBI_GenBank
Match: XP_004343956.1 (GPI mannosyltransferase 1, putative [Acanthamoeba castellanii str. Neff] >ELR20553.1 GPI mannosyltransferase 1, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 168.7 bits (426), Expect = 2.400e-38 Identity = 86/206 (41.75%), Postives = 126/206 (61.17%), Query Frame = 0 Query: 14 PIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHPAWGKVLFIASDLVVGLLVMRISAWTTHYPSLLIASAAKRGSVPP-------------TAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSI 207 P +VF A VR+ ++G G W DR + VKYTDIDY+VF+DAARF+ +GGSPY+R TYRYTP LA LM PN++LHP +GK+LF A D+ +G L+ + IA AA + + P A+ ++ A +WL NP I STRG+A++L+ LV+A + + R +L + +G +VHFK+YPI++++ Sbjct: 18 PWWVFVGAFVVRLVLIGYGEWQDR-TMVVKYTDIDYMVFTDAARFITEGGSPYDRSTYRYTPLLAWLMTPNIYLHPVFGKLLFAAGDVAIGALIYLLVPLLNDQAKPTIAPAAGKSTTKPKSTTTKGTKKAEAVVAAGQEEAIVWACVWLFNPFSIVISTRGNAESLIGLLVVAALYCLLTKRLILGAILYGLSVHFKIYPIIYAL 222
BLAST of NO17G01950 vs. NCBI_GenBank
Match: PJF17879.1 (hypothetical protein PSACC_02316 [Paramicrosporidium saccamoebae]) HSP 1 Score: 167.5 bits (423), Expect = 5.300e-38 Identity = 98/203 (48.28%), Postives = 127/203 (62.56%), Query Frame = 0 Query: 20 LALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHPAWGKVLFIASDLVVGLLVMRISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSARPAEVDE 223 LA+ VRV +L GAW DR + VKYTD+DY VFSDAA + GGSPY R T+RYTP LA L++PN W +GKVLF A DLV + Y LL RG+ P AA L WLLNP+V STRG+A++L+S LVL+++ F+ NRP+L G+ +GAAVHFKL+PI++SI+ LA L R ++ E Sbjct: 10 LAVFVRVVLLVYGAWQDR-TLEVKYTDVDYWVFSDAAAAVRAGGSPYSRHTFRYTPLLAVLLVPNGWTGGMFGKVLFCAFDLVAAYFI---------YLFLL------RGTNPSRAAR------LVGLFWLLNPMVFTISTRGNAESLLSVLVLSSLYFITSNRPLLGGLAYGAAVHFKLFPIIYSIAILAHLVRGRSKKLIE 190
BLAST of NO17G01950 vs. NCBI_GenBank
Match: GAQ46507.1 (hypothetical protein ASPNIDRAFT_43728 [Aspergillus niger]) HSP 1 Score: 166.0 bits (419), Expect = 1.500e-37 Identity = 95/210 (45.24%), Postives = 127/210 (60.48%), Query Frame = 0 Query: 13 SPIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHP----AWGKVLFIASDLVVGLLVMR--ISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSAR 217 SP V+ A+A+R +L GAW D A+S+VKYTDIDYLVF+DAAR++ G SPYERDTYRYTP LA L+LP W P ++GK LF SD++ G L+ R +SA+ P L +A+ WLLNP+V N STRGS++ L+ LV+A + V + R VLAGV G +VHFK+YP ++ +S + L R Sbjct: 15 SPTLVYTSAIALRAILLIYGAWQD-ANSAVKYTDIDYLVFTDAARYVSHGASPYERDTYRYTPLLAWLLLPTSWSGPSLLFSFGKALFALSDVIAGWLIARSLVSAYGMDAP----------------------RALKYASFWLLNPMVANISTRGSSEGLLGVLVIALLWAVLRRRVVLAGVLLGLSVHFKIYPFIYGVSIIWWLDRER 201
BLAST of NO17G01950 vs. NCBI_GenBank
Match: OJI88601.1 (hypothetical protein ASPTUDRAFT_50554 [Aspergillus tubingensis CBS 134.48]) HSP 1 Score: 166.0 bits (419), Expect = 1.500e-37 Identity = 95/210 (45.24%), Postives = 127/210 (60.48%), Query Frame = 0 Query: 13 SPIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHP----AWGKVLFIASDLVVGLLVMR--ISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSAR 217 SP V+ A+A+R +L GAW D A+S+VKYTDIDYLVF+DAAR++ G SPYERDTYRYTP LA L+LP W P ++GK LF SD++ G L+ R +SA+ P L +A+ WLLNP+V N STRGS++ L+ LV+A + V + R VLAGV G +VHFK+YP ++ +S + L R Sbjct: 11 SPTLVYTSAIALRAILLIYGAWQD-ANSAVKYTDIDYLVFTDAARYVSHGASPYERDTYRYTPLLAWLLLPTSWSGPSLLFSFGKALFALSDVIAGWLIARSLVSAYGMDAP----------------------RALKYASFWLLNPMVANISTRGSSEGLLGVLVIALLWAVLRRRVVLAGVLLGLSVHFKIYPFIYGVSIIWWLDRER 197
BLAST of NO17G01950 vs. NCBI_GenBank
Match: PRP86572.1 (GPI mannosyltransferase 1-like [Planoprotostelium fungivorum]) HSP 1 Score: 166.0 bits (419), Expect = 1.500e-37 Identity = 87/200 (43.50%), Postives = 127/200 (63.50%), Query Frame = 0 Query: 17 VFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHPAWGKVLFIASDLVVGLLVMRISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSAR 217 ++A A+ RV ++ W D A+ VKYTDIDY+VFSDAARF+ QG SPY+R TYRYTP LA ++ PN+++HPAWGKVLF SD+++GL+V I LI R L + ALWLLNP++IN STRG+A++L+S V+A++ ++ ++R + V G +VH K+YPI++ + F + + R Sbjct: 26 LYAAAIISRVALMLYAEWQD-ANMLVKYTDIDYVVFSDAARFVTQGSSPYQRATYRYTPLLAWILTPNVYIHPAWGKVLFCISDILIGLIVQSIL-------HRLIPHTKGREEERNLTI------LKYTALWLLNPVIINVSTRGNAESLISLFVMASLHYIMEDRLTIGAVLFGLSVHLKIYPILYGLPFYFYIENGR 211
BLAST of NO17G01950 vs. NCBI_GenBank
Match: GAA92440.1 (GPI mannosyltransferase 1 [Aspergillus kawachii IFO 4308]) HSP 1 Score: 165.2 bits (417), Expect = 2.600e-37 Identity = 95/210 (45.24%), Postives = 127/210 (60.48%), Query Frame = 0 Query: 13 SPIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHP----AWGKVLFIASDLVVGLLVMR--ISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSAR 217 SP V+ A+A+R +L GAW D A+S+VKYTDIDYLVF+DAAR++ G SPYERDTYRYTP LA L+LP W P ++GK LF SD++ G L+ R +SA+ P L +A+ WLLNP+V N STRGS++ L+ LV+A + V + R VLAGV G +VHFK+YP ++ +S + L R Sbjct: 14 SPTLVYTSAIALRAILLIYGAWQD-ANSAVKYTDIDYLVFTDAARYVSHGASPYERDTYRYTPLLAWLLLPTSWSGPSLLFSFGKALFALSDVLAGWLIARSLVSAYGMDAP----------------------RALKYASFWLLNPMVANISTRGSSEGLLGVLVIALLWAVLRRRVVLAGVLLGLSVHFKIYPFIYGVSIIWWLDRER 200
BLAST of NO17G01950 vs. NCBI_GenBank
Match: GAT24774.1 (GPI mannosyltransferase 1 [Aspergillus luchuensis]) HSP 1 Score: 165.2 bits (417), Expect = 2.600e-37 Identity = 95/210 (45.24%), Postives = 127/210 (60.48%), Query Frame = 0 Query: 13 SPIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHP----AWGKVLFIASDLVVGLLVMR--ISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSAR 217 SP V+ A+A+R +L GAW D A+S+VKYTDIDYLVF+DAAR++ G SPYERDTYRYTP LA L+LP W P ++GK LF SD++ G L+ R +SA+ P L +A+ WLLNP+V N STRGS++ L+ LV+A + V + R VLAGV G +VHFK+YP ++ +S + L R Sbjct: 14 SPTLVYTSAIALRAILLIYGAWQD-ANSAVKYTDIDYLVFTDAARYVSHGASPYERDTYRYTPLLAWLLLPTSWSGPSLLFSFGKALFALSDVLAGWLIARSLVSAYGMDAP----------------------RALKYASFWLLNPMVANISTRGSSEGLLGVLVIALLWAVLRRRVVLAGVLLGLSVHFKIYPFIYGVSIIWWLDRER 200
BLAST of NO17G01950 vs. NCBI_GenBank
Match: OJZ81580.1 (glycosyltransferase family 50 protein [Aspergillus luchuensis CBS 106.47]) HSP 1 Score: 165.2 bits (417), Expect = 2.600e-37 Identity = 95/210 (45.24%), Postives = 127/210 (60.48%), Query Frame = 0 Query: 13 SPIFVFALALAVRVGMLGVGAWMDRASSSVKYTDIDYLVFSDAARFLYQGGSPYERDTYRYTPFLACLMLPNLWLHP----AWGKVLFIASDLVVGLLVMR--ISAWTTHYPSLLIASAAKRGSVPPTAASWYSHPLLHAALWLLNPLVINFSTRGSADTLVSALVLATVLFVQQNRPVLAGVFHGAAVHFKLYPIVFSISFLAALSSAR 217 SP V+ A+A+R +L GAW D A+S+VKYTDIDYLVF+DAAR++ G SPYERDTYRYTP LA L+LP W P ++GK LF SD++ G L+ R +SA+ P L +A+ WLLNP+V N STRGS++ L+ LV+A + V + R VLAGV G +VHFK+YP ++ +S + L R Sbjct: 10 SPTLVYTSAIALRAILLIYGAWQD-ANSAVKYTDIDYLVFTDAARYVSHGASPYERDTYRYTPLLAWLLLPTSWSGPSLLFSFGKALFALSDVLAGWLIARSLVSAYGMDAP----------------------RALKYASFWLLNPMVANISTRGSSEGLLGVLVIALLWAVLRRRVVLAGVLLGLSVHFKIYPFIYGVSIIWWLDRER 196 The following BLAST results are available for this feature:
BLAST of NO17G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01950 ID=NO17G01950|Name=NO17G01950|organism=Nannochloropsis oceanica|type=gene|length=1984bpback to top protein sequence of NO17G01950.1 >NO17G01950.1-protein ID=NO17G01950.1-protein|Name=NO17G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top Synonyms
Publications
|