NO17G01900, NO17G01900 (gene) Nannochloropsis oceanica

Overview
NameNO17G01900
Unique NameNO17G01900
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2277
Alignment locationchr17:546249..548525 -

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Properties
Property NameValue
DescriptionPentafunctional arom polypeptide
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:546249..548525 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0004764shikimate 3-dehydrogenase (NADP+) activity
GO:00038553-dehydroquinate dehydratase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR013708Shikimate_DH-bd_N
IPR001381DHquinase_I
Homology
BLAST of NO17G01900 vs. NCBI_GenBank
Match: EWM24256.1 (pentafunctional arom polypeptide [Nannochloropsis gaditana])

HSP 1 Score: 974.2 bits (2517), Expect = 2.400e-280
Identity = 516/761 (67.81%), Postives = 596/761 (78.32%), Query Frame = 0
Query:    5 RWRYVAAAALFFLSGLTATVDSFPVLRC-PPXXXXXXXXXXXXXXXXXXXLALNQHSCKLPSSSTSTRPASGLSMLASSIASTICRTVSGGNMA---IYLVGATNQRIAVAEAVSKAVGWPVVKATSTAALLSSPSIPAIVDVDDSTIADAKGAEFLEAQPLVIQLVEMEDFA---DNDEKHKSRQAVSRFDVAVGSEPDVPLAQIVQSIRHITRLSDGFGDGTIDANLNLDLGANTFFLSLTFPDMRECLPFLPGLERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAAAAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAVYATVEELK 759
            RW YV    +  LSG  A  ++F V  C  P                          CK PS+    +    L M+  S  S I R +   + +   IY+VG  + R AVAEA+S A+G PV++A+S A LL  PS  AIVDVDDS I + +GA  L A  LVI+LVEM+DF+      ++ K RQAVSRFDVAVG+E D+    +V+ I+++ RLS G+GD  +D +L+LDLGANTFFLSLTFPD+RECLP LPGLERGVDALELRVDLL+D+TPW ILRQVAILKSAT+LP+I+TVRS+DQCGAFPN+  AIF LL LGLRAGVEVLDVEACWDRK R  LL  AWR YRGTTRLLGSYHVVGR   D+EAL IFQEC+HDGRVDAVKVVLTA+S+RD Y VHELAAAAGLP S+PVVALCLGEVGKLSRVLNSRYTPVT+KLLPYVAAPGQLTA EIM  R+DLGMVP++SFCLLG PI++SPSPAMH AAFQHCLLPHTYS  ETEDVLDLKA+  +     FGG SVTIPHKQAVIPLL RV PS +AIGAVNTVVVE +  TG +RWVGHNTDWKGIV+P+ +RLRE GRG+ D +GRPRVALVVGGGGTALAAAYGMTSLG+RLLVFNRTPSKA DV  RFGG V+ +L+PE++L AT GQQ  +DVVVST+P++A F+LP ++L A+PVVMD AYRPAET+LLAQAR AGCP+VQGAEMLIAQGVEQFQLWT+RRAPE VMRAAVYATVEELK
Sbjct:   11 RW-YVPTIHVLLLSGWAAISEAFAVQGCNAPAIRALTSSSSKPAASSGVASVYRNDCCKAPSTCKPLQTVGPLMMMPDS--SNIGRDIHESSRSCQNIYIVGKPSCRKAVAEALSTAMGLPVIQASSAATLL--PSSSAIVDVDDSVITENEGATILSALGLVIRLVEMDDFSGVGKERDRQKERQAVSRFDVAVGAEDDIAHTYVVKHIQNLRRLSGGYGDHAVDPSLDLDLGANTFFLSLTFPDVRECLPLLPGLERGVDALELRVDLLRDKTPWDILRQVAILKSATRLPVIFTVRSQDQCGAFPNEPAAIFDLLALGLRAGVEVLDVEACWDRKARESLLTEAWRGYRGTTRLLGSYHVVGRRVPDREALEIFQECYHDGRVDAVKVVLTAHSVRDTYRVHELAAAAGLPPSLPVVALCLGEVGKLSRVLNSRYTPVTSKLLPYVAAPGQLTAEEIMRLRQDLGMVPTSSFCLLGSPIAQSPSPAMHTAAFQHCLLPHTYSFLETEDVLDLKARAKEGR---FGGASVTIPHKQAVIPLLDRVEPSAEAIGAVNTVVVEEDPTTGSVRWVGHNTDWKGIVQPVTRRLREAGRGLRDDKGRPRVALVVGGGGTALAAAYGMTSLGMRLLVFNRTPSKAHDVVRRFGGKVLESLSPEAVLAATEGQQDHLDVVVSTVPASAEFVLPDAMLLARPVVMDAAYRPAETSLLAQARAAGCPYVQGAEMLIAQGVEQFQLWTRRRAPEEVMRAAVYATVEELK 763          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: CBN78053.1 (Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 543.5 bits (1399), Expect = 1.000e-150
Identity = 310/604 (51.32%), Postives = 393/604 (65.07%), Query Frame = 0
Query:  159 AQPLVIQLVEMEDFADNDEKHKSRQAVSRFDVAVGS---EPDVPLAQIVQSIRHITRLSDGFGDGTIDANLNLDLGANTFFLSLTFPDMRECLPFLPGLERGVDALELRVDLLQD-RTPWSILRQVAILKSAT-QLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAAAAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAVYATVEEL 758
            A PL + L    D  D D   +  QA +++ V VG    E D   A++ + +    +           A++ LD+G NTFFLSLTF D       LP L  GVDA+ELRVDLL D   P+++LRQ++IL+  T  LP+++T+RSK QCGAFP+D E IF+L   GLRAG EV+DVEA W    R  L+  A  +Y G   L+GSYHVVGR TT+++A  +F EC+HDG VD VKVV TA    D+  VH  AAA  L   VP + LCL E GKLSRVLN R+TPVT++ LP+VAAPGQ+++ EIM+ R +LG+ P  SF L G PIS SPSP MHNA F+   LPH Y L E ED   +    S      FGG SVTIPHKQ V+PLL  VS + +AIGAVNTVVV  +  TG  R  G NTDW GI++P+  RL E   G    +GR  VALVVG GG A+ A + M  LGL ++V+NRTPSKA+++A RFGG  V AL  E++ +A G     +DVVVSTIP+ A F LP  LL ++PVV D AY+PA T+LLAQA+EA CP+VQGA+ML+ QG+EQFQLWT+RRAP   M  AV+A V+ +
Sbjct:  113 AHPLTVHLA--LDTDDTDTLKRCEQA-TKYTVVVGDGRVEEDYAKAELSRLVAFSRKPKPS------PADVALDMGKNTFFLSLTFEDFSLHTDLLPTLTEGVDAMELRVDLLADNEDPYTVLRQLSILRRHTGYLPVVFTIRSKGQCGAFPDDPEKIFRLARWGLRAGCEVMDVEANWPMSYREGLIREAGENYPGAV-LVGSYHVVGRKTTEEQAKELFMECYHDGAVDGVKVVTTAFEPEDSIRVH--AAAKSLALPVPYIGLCLTETGKLSRVLNKRFTPVTHENLPFVAAPGQMSSKEIMHHRAELGLCPPRSFFLFGSPISASPSPDMHNAGFRSTGLPHEYFLCEGEDPAIMAEALS---RPDFGGASVTIPHKQNVLPLLDEVSEAAEAIGAVNTVVVGTDPETGARRLRGDNTDWLGILRPVKARL-EASSGW--EQGRGGVALVVGAGGAAMGALFAMQRLGLEVVVYNRTPSKAEELAGRFGGAAVSALDAETLEKACGA--AAVDVVVSTIPAAAEFTLPDYLLESKPVVFDAAYKPALTSLLAQAKEAQCPYVQGADMLVEQGLEQFQLWTERRAPREEMEGAVFAKVDRI 696          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: OQR86371.1 (pentafunctional AROM polypeptide [Achlya hypogyna])

HSP 1 Score: 426.4 bits (1095), Expect = 1.900e-115
Identity = 246/526 (46.77%), Postives = 320/526 (60.84%), Query Frame = 0
Query:  233 NTFFLSLTFPDMRE-CLPFLPGLERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAA--AAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAVYATVE 756
            +++FLSLTF D+    +  L  +  GV ALELRVDLL   TP  +  QVA L++ + LPII+TVRS +Q GAFP+    IF+LL LGLR G EV+D+E CW+  ++S LL A     +G   +L SYH +    T  +   +F  C   G+VD  KVVL A  + DAY +H++ A   A     +P +A+C    G LSRVLN   TPVT+ LLP  AAPGQL+  EI + R+ LGM+P  ++ L G PI  SPSPAMHNAAF H  LPHTY L E  DV   +A   +   ++FGG SVTIPHK  +I  +  +SP+  AIGAVNT+V   E G      +G NTDW GI++P+ +RL       T + GR   ALV+G GGTA+AA Y M  LGL + V+NRT SKA++VAARFG T + +L    ++          DVVV TIP+TAGF LP +L R   VVMD AY+PA T LLA A   GC  +QG EML+ QG+EQ + WT    P  V+   V A ++
Sbjct:  994 DSYFLSLTFDDLHALTVDALAAVAAGVHALELRVDLLASTTPVFVADQVARLRALSSLPIIFTVRSVNQGGAFPDAPADIFELLKLGLRLGCEVIDMECCWESALQSELLAA-----KGGAAILASYHAIHERATKAKTAELFDLCAWQGQVDIAKVVLKAYDVADAYMIHDVLADCRARWSFPMPTIAVCTTPAGALSRVLNRTLTPVTHPLLPVAAAPGQLSVAEIQSLRQTLGMLPGRAYFLFGSPIQHSPSPAMHNAAFAHLGLPHTYRLLEATDVGVYEAVLRN---ETFGGASVTIPHKVDIIRFVDELSPAATAIGAVNTLVPSAETGV----ILGDNTDWLGILRPVQRRLE------TPSGGR---ALVIGAGGTAMAACYAMQQLGLAVFVYNRTLSKAEEVAARFGATALDSLETAPLM----------DVVVGTIPATAGFTLPDALARPGVVVMDAAYKPAITPLLAHAAARGCTCIQGYEMLVEQGLEQSKRWTGASVPSTVLATPVKARLD 1488          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: XP_012202470.1 (hypothetical protein SPRG_08112 [Saprolegnia parasitica CBS 223.65] >KDO26822.1 hypothetical protein SPRG_08112 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 419.5 bits (1077), Expect = 2.300e-113
Identity = 271/660 (41.06%), Postives = 356/660 (53.94%), Query Frame = 0
Query:  119 GWPVVKATSTAAL----LSSPSI---PAIVDVDDSTIADAKGAEFLEAQPLVIQLVE-MEDFADNDEKHKSRQAV--SRFDVAVGSEPDVPLAQ-----IVQSIRHITRLSDGFGDGTIDANLNLDLG-----ANTFFLSLTFPDMRECLPF-LPGLERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAA--AAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAVYATVE 756
            GW   +A   A L     S+PS      I+      +        L+A PLV+ +   + D     E   +R A   S  DV    +P    A      +        R+S  FG          D+       +++FLSLT P++       L  L  GV ALELRVDLL    P  +  QVA L+S + LPIIYTVRS +Q GA+P+    IF LL LGLR G EV+D+E CW+  +++ LL+A     +G + +L SYH +   +T ++   +F  C   G+VD  KVVL A  + DAY +H++ A   A  P  +P +A+C    G LSRVLN   TPVT+  LP  AAPGQL+  EI   R+ LGM P  SF L G PI+ SPSPAMHNAAF    LPHTY+LFE+ D+   K   +D N   FGG SVTIPHK  +IP L ++SP+  AIGAVNT+V      + +    G NTDW GI +PI +RL  T  G          ALV+G GGTA+AA Y M  LGL + V+NRT +KA +VAARF  T +  L     +           VVV TIP++AGF LPP+LL    +VMD AY+PA T +LA A   GC  +QG EML+ QG+EQ + WT    P  V+   V A ++
Sbjct:  863 GWDAFRAAEVACLETWMTSAPSSSGPTTIISCGGGLVESPAAVGMLQAYPLVVHVERAIADIVAYLETDAARPAYGESVLDVWTRRQPLFAAASQYHFTVSAGDVDFARISADFGRFLAVVLRRFDVAKLTRIPDSYFLSLTSPNLHAVTKAELDVLATGVHALELRVDLLASTEPAFVADQVARLRSLSPLPIIYTVRSLNQGGAYPDAPGPIFDLLRLGLRLGCEVVDMECCWESALQASLLEA-----KGGSAVLASYHAIQERSTKEKTAELFDLCAWQGQVDIAKVVLKAYDISDAYMIHQVLAECKARWPFHMPTIAVCTTPSGSLSRVLNRTLTPVTHPALPAAAAPGQLSVAEIETLRKTLGMTPGLSFYLFGSPIAHSPSPAMHNAAFAALQLPHTYALFESTDISVYKRVLNDPN---FGGASVTIPHKVDIIPYLQKLSPAASAIGAVNTLVPNPVTKSME----GDNTDWLGIYRPIARRLSPTANGGN--------ALVIGAGGTAMAACYAMQQLGLHVFVYNRTLAKATEVAARFQSTALPTLEAAPTMH----------VVVGTIPASAGFTLPPALLHKALIVMDAAYKPAITPMLAHASRHGCVCIQGYEMLVEQGLEQSKRWTGASVPIDVLATVVKARLD 1492          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: XP_009838843.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Aphanomyces astaci] >ETV71654.1 3-phosphoshikimate 1-carboxyvinyltransferase [Aphanomyces astaci])

HSP 1 Score: 410.6 bits (1054), Expect = 1.100e-110
Identity = 249/537 (46.37%), Postives = 322/537 (59.96%), Query Frame = 0
Query:  220 GTIDANLNLDLGANTFFLSLTFPDMRECLPFLPGLERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAAAA--GLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAVYATV 755
            G  D+N  L    +++F+SLTFP        +  +     A+ELRVDLL+      I  QVA L++A+ LPIIYTVR+ DQ GAFPND++ +F LL  G+  G EV+D+E CW    +  L+     S RG+  +L S+H +   ++ +    +F  C  +G+VD  KVVL A  + DA  VH +A       P  +P +ALC  E GKLSRVLN   TPVT+  LP  AAPGQL+  EI + RR LGMV    F L G PI  SPSP MHNAAF+   LPH YSL ++ D+    A     + +SFGG SVTIPHK  +IP L  +S +   IGAVNT++    +  G+L  VG NTDWKGI +P+  RL  +  G ++     +VALVVG GGTA+AA Y M  LGLRL+VFNRT  KA DVA RFGGT V +LT    L+A       +DVVV TIP+ AGF+LP  LL    +VMD AY+PA T LLAQA   G   +QG EML+ QG+EQ  LWT     + V+ + V AT+
Sbjct:  984 GRFDSNA-LKSQPDSYFVSLTFPHYTSKKTLIETVTHKAHAVELRVDLLESVEKPFIAHQVAALRAASTLPIIYTVRTVDQGGAFPNDSKRVFDLLQFGIALGCEVIDMECCWPAADQLDLI----ASKRGSA-ILASFHAIHERSSAERVRELFDLCAWNGQVDIAKVVLKAYDVADALMVHRVAQECRDRWPFDMPCIALCTTEAGKLSRVLNRTLTPVTHAALPVAAAPGQLSIDEIESLRRTLGMVQGRQFYLFGSPIQHSPSPRMHNAAFRALHLPHIYSLHDSTDIATCVAL---MHTRSFGGGSVTIPHKLDIIPHLSSLSAAAATIGAVNTIL----SINGKL--VGDNTDWKGIGRPVAARLESSPIGRSN-----KVALVVGAGGTAMAACYAMQQLGLRLVVFNRTLDKAIDVARRFGGTAVASLTD---LDA-------VDVVVGTIPAAAGFVLPEHLLSKHVIVMDAAYKPAITPLLAQAHAHGAVCIQGYEMLVEQGLEQSLLWTHEAVAKEVLASQVKATL 1490          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: OQR97948.1 (pentafunctional AROM polypeptide [Thraustotheca clavata])

HSP 1 Score: 409.5 bits (1051), Expect = 2.300e-110
Identity = 249/548 (45.44%), Postives = 327/548 (59.67%), Query Frame = 0
Query:  233 NTFFLSLTFPDMRECLPF-LPGLERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVV-GRSTTDQ--------------EALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAAAA--GLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSA----------SFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAVYA 753
            +++FLSLTFPD++E  P  L  +   V ALELRVDLL+      +  QVA L+S + LPIIYTVRS +Q GAFP+  E IF LL  GL  G E++D+E CWD  ++S LL A     +G   +L SYH +  RST ++              + + +F+ C   G+VD  KVVL A  + DAY +H++ +         +P +A+C   VG LSRVLN   TPVT+  LP  AAPGQL+  EI++ R+ LGM P+A          SF L G PI+ SPSPAMHNAAFQH  LP+ Y L ET D+   K       A +FGG SVTIP K  +IPL+  +SP+  AIG+VNT+V + +      + +G NTDW GI +PI +RL     G +D   RPR  LV+G GGT+++A YGM  LGL++ V+NRT SKAQ+VAARF  T          L +        DVV+ T+PSTAGF LP S+L  Q +VMD AY+PA T LL QA   GC  +QG EML+ QG+EQ +LWT    P+ +M   V A
Sbjct: 1005 DSYFLSLTFPDLKELTPTQLATVASDVQALELRVDLLKSHDKDFVADQVARLRSLSTLPIIYTVRSWNQGGAFPDTPEPIFDLLHFGLTLGCEIIDMECCWDSSLQSSLLQA-----KGGAAILASYHAIQSRSTKEKTTGTMLFVWLISNPKHVELFELCAWQGQVDICKVVLKAYDVSDAYMIHQVLSECQQRWAFKMPCIAVCTTTVGSLSRVLNRTLTPVTHPSLPVAAAPGQLSVAEIVSLRKILGM-PAANNTQLSTFGKSFYLFGSPITHSPSPAMHNAAFQHRQLPYRYDLCETTDLSLCKKTI---RADNFGGASVTIPMKLEIIPLMDVLSPAAQAIGSVNTIVPQPDG-----KLLGENTDWIGIYRPIQRRL-----GTSD---RPRNGLVIGAGGTSMSACYGMQQLGLKVYVYNRTLSKAQEVAARFNATA---------LSSFDSSTPKFDVVMGTVPSTAGFTLPESVLHPQLIVMDAAYKPAITPLLQQALIHGCQCIQGYEMLVEQGLEQSKLWTGDYVPKHIMETQVKA 1521          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: XP_008869352.1 (3-phosphoshikimate 1-carboxyvinyltransferase [Aphanomyces invadans] >ETW01504.1 3-phosphoshikimate 1-carboxyvinyltransferase [Aphanomyces invadans])

HSP 1 Score: 407.1 bits (1045), Expect = 1.200e-109
Identity = 277/672 (41.22%), Postives = 361/672 (53.72%), Query Frame = 0
Query:  108 IAVAEAVSKAVGWPVVKATSTAALLS---SPSIPAIVDVDDSTIADAKGAEFLEAQPLVIQLVE-MEDFADNDEKHKSRQAVSRFDVAVGSEPDVPLAQIVQSI--------RHITRLSDGFGDGTIDA----NL-NLDLGANTFFLSLTFPDMRECLPFLPG-LERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWR---SYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAAAA----GLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAVYATV 755
            ++V E V+ A GW   +A     L S   +P I  IV      +   +    L     VI L   + D      + +SR A    D+A      VPL     S          + TR++  F    +      NL  L    +T+F+SLTFP+     P L   +     ALELRVDLL+      I  QVA L++A+ LPIIYTVR+  Q GAFP+D   +F LL  G+  G EV+D+E CW         D  WR   S RG+  +L SYH +   TT +    +F+ C   G VD  KVV+ A  + DAY +H++  +     G P  +P +ALC  E GKLSRVLN   TPVT+  LP  AAPGQL+  EI + RR LGMV    F L G PI  SPSP MHNAAF+   LPH YSL +  D+   +A     ++  FGG SVTIP K  +IP L R+SP+  AIGAVNT++    A       VG NTDW GI +PI  RL  +    TD+  R +VALVVG GGTA+AA Y M  LGL++LV+NRT  KA++VAARFG T V +L               +DVVV TIP+T+GF LP  L+R   +VMD AY+PA T LLA A       +QG EML+ QG+EQ +LWT     ++++   V AT+
Sbjct:  851 MSVKEYVA-ANGWAAFRAQEVVCLQSWVQTPPINTIVSCGGGVVESPEAVALLSQSSNVIYLQRTLTDIEATLAQDESRPAYGE-DIATVFHRRVPLFTASSSFVFPVLPGDVNYTRINRDFVRLLMVVLGRYNLAPLKTQPDTYFVSLTFPNYTTVPPDLVATVADKAHALELRVDLLESFDKDFIANQVAALRAASTLPIIYTVRTIGQGGAFPDDPTRVFDLLHFGIALGCEVIDMECCWP-------ADEQWRLIESKRGSA-ILASYHAIRERTTPERTQELFELCAWQGNVDMAKVVIQAYDVSDAYMIHQVVESCRSRWGFP--MPCIALCTTEAGKLSRVLNRTLTPVTHPALPVAAAPGQLSIQEIESLRRSLGMVQGKQFYLFGSPIQHSPSPRMHNAAFRALHLPHVYSLHDATDIATFEALL---HSPEFGGASVTIPLKVDIIPYLSRLSPAATAIGAVNTIIPVDGA------LVGDNTDWMGIFRPISARLSVS---ATDSSRRSKVALVVGAGGTAMAACYAMQQLGLQVLVYNRTLEKAKEVAARFGATAVASL----------ADVAAVDVVVGTIPATSGFTLPDRLVRQGVIVMDAAYKPAITPLLAHAHAHAAVCIQGYEMLVEQGLEQSKLWTGETVQKSILADQVKATL 1488          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: XP_008617870.1 (hypothetical protein SDRG_13554 [Saprolegnia diclina VS20] >EQC28678.1 hypothetical protein SDRG_13554 [Saprolegnia diclina VS20])

HSP 1 Score: 404.4 bits (1038), Expect = 7.500e-109
Identity = 268/647 (41.42%), Postives = 353/647 (54.56%), Query Frame = 0
Query:  119 GWPVVKATSTAAL----LSSPSI---PAIVDVDDSTIADAKGAEFLEAQPLVIQ----LVEMEDFADNDEKHKSRQAVSRFDVAVGSEPDVPLAQIVQSIRHITRLSDGFGDGTIDANLNLDLGA--------------NTFFLSLTFPDMRECLPF-LPGLERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAA--AAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAYRPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWT 738
            GW   +A   A L     S+PS      I+      +  +     L+A PLV+     + ++E +   D    +R A     +AV +    PL     S  H T  +  F    I A+    L                +++FLSLT P++       L  L  GV ALELRVDLL       +  QVA L++ + LPIIYTVRS +Q GAFP+    IF LL LGLR G EV+D+E CW+  +++ LL+A     +G + +L SYH +   +T ++   +F  C   G+VD  KVVL A  + DAY +H++ A   A     +P +A+C    G LSRVLN   TPVT+  LP  AAPGQL+  EI   R+ LGM P   F L G+PI+ SPSPAMHNAAF    LPHTY L E+ D+   K    +    SFGG SVTIPHK  +IP L ++SP+  AIGAVNTVVV R       R  G NTDW GI +PI +RL  T       +G    ALV+G GGTA+AA Y +  LGLR+ V+NRT +KA +VA+RF  T + +      LEA    Q    VVV TIP++AGF LP +LL    +VMD AY+PA T +LA A   GC  +QG EML+ QG+EQ + WT
Sbjct:  863 GWDAFRAAEVACLEQWMASAPSSSGPTTIISCGGGLVESSAAVAMLQAYPLVVHVERAIADIEAYLATD---AARPAYGESVLAVWTRRQ-PLF-TAASQYHFTVSAGDFDFARISADFGRFLAVVLRRFNVASLTRIPDSYFLSLTSPNLHAVTKADLGVLATGVHALELRVDLLASTEHAFVADQVARLRALSPLPIIYTVRSLNQGGAFPDAPADIFDLLRLGLRLGCEVVDMECCWESALQASLLEA-----KGGSAILASYHAIQSRSTKEKTAELFDLCAWQGQVDIAKVVLKAYDISDAYMIHQVLAECKARWSFDMPTIAVCTTPSGSLSRVLNRTLTPVTHPALPAAAAPGQLSVAEIETLRQTLGMAPGLRFYLFGNPIAHSPSPAMHNAAFAALQLPHTYDLLESNDISVYKNVLEN---PSFGGASVTIPHKVDIIPFLQQLSPAATAIGAVNTVVVNR----ATKRLEGDNTDWLGIYRPIARRLSTT-------DGN---ALVIGAGGTAMAACYALQQLGLRVFVYNRTLAKASEVASRFHSTALPS------LEAVPTMQ----VVVGTIPASAGFTLPDALLHKALIVMDAAYKPAITPMLAHASRFGCVCIQGYEMLVEQGLEQSKRWT 1472          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: XP_009514689.1 (pentafunctional aromatic amino acid protein [Phytophthora sojae] >EGZ27414.1 pentafunctional aromatic amino acid protein [Phytophthora sojae])

HSP 1 Score: 404.1 bits (1037), Expect = 9.800e-109
Identity = 241/522 (46.17%), Postives = 319/522 (61.11%), Query Frame = 0
Query:  232 ANTFFLSLTFPDMRECLPFLPGLERGVDALELRVDLLQ-DRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAE---AIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAA--AAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLP--HTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGL-RLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLR-----AQPVVMDVAYRPAETALLAQAREA-GCPFVQGAEMLIAQGVEQFQLWTK 739
            A+TFFLSLTFPD+ +  P +  + +G DALELRVDLL+  +    +  QVA+L+S + LPII+TVRSK Q GAFP+  E    +F+LL LG+R G E +DVE CW RK R HLL     ++R  + ++ S+H V + T++ E   IF EC+  G V  VKVV+ A S +DA  V  +A   A      +P+++LC  E GKL+R+LN   TPVT+ LLP  AAPGQL+  EIM  R+ LG++P+  F L G PI KSPSPAMHNA F+   L    TY L +T DV+++  +       +FGG SVTIP K  ++  L  +SP+  AIGAVNT++  RE   G   W G NTDW GI++PI +RL         AE     ALVVG GGT++AA+Y M  LG+ +L +FNRT  KAQ VAARF    +  LTP+++ +        +DVVV TIP+ AGF LP  L+       + VV+D AY P  T +LA A  A G   +QG EML  QG+EQF  W K
Sbjct: 1017 ADTFFLSLTFPDVNDARPIISDITKGADALELRVDLLKYPQDTKFVASQVALLRSLSTLPIIFTVRSKGQGGAFPDGEEHEQKMFELLQLGVRLGCEFVDVETCWSRKAREHLL-----AHRHRSAIISSFHAVQKPTSEAETTAIFNECYSRGNVQIVKVVVKAYSPQDALMVDRVAKDFAKAWQQQMPIISLCTTEAGKLTRMLNRTLTPVTHPLLPAAAAPGQLSVEEIMTLRKQLGLLPAREFFLFGSPIQKSPSPAMHNAGFESTSLASLFTYGLHDTADVVEIVQRMQAPGT-TFGGGSVTIPLKVDIMEHLDELSPAAKAIGAVNTIM--REDRNGSPYWKGDNTDWLGILRPISKRLATLSVRKPAAE---LTALVVGAGGTSMAASYAMRQLGVGKLFIFNRTLEKAQAVAARFDAEALSELTPDTLAQ--------VDVVVGTIPAQAGFQLPDYLVAPRADGGKVVVLDAAYMPPITPMLAHAHAAGGAVCIQGYEMLYEQGIEQFYRWHK 1519          
BLAST of NO17G01900 vs. NCBI_GenBank
Match: XP_002896252.1 (pentafunctional AROM polypeptide, putative [Phytophthora infestans T30-4] >EEY67699.1 pentafunctional AROM polypeptide, putative [Phytophthora infestans T30-4])

HSP 1 Score: 402.9 bits (1034), Expect = 2.200e-108
Identity = 243/523 (46.46%), Postives = 322/523 (61.57%), Query Frame = 0
Query:  232 ANTFFLSLTFPDMRECLPFLPGLERGVDALELRVDLLQ--DRTPWSILRQVAILKSATQLPIIYTVRSKDQCGAFPNDAE---AIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRGTTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYHVHELAA--AAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPGQLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLP--HTYSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDAIGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEGRPRVALVVGGGGTALAAAYGMTSLGL-RLLVFNRTPSKAQDVAARFGGTVVHALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQP-----VVMDVAYRPAETALLAQAREAGCPF-VQGAEMLIAQGVEQFQLWTK 739
            ++TFFLSLTFPD+ +    +  + +G DALELRVDLL+  + T + +  QVA+L+S + LPII+TVRSK Q GAFP+  E    +F+LL LG+R G E +D+E CW RK R  LL     ++R  + ++ S+H V + T++ EA  IF+EC+  GRV  VKVV+ A S  DA  V  +A   A+     +P+++LC  E GKL+RVLN   TPVT+ LLP  AAPGQL+  EIM  R+ LG++P+  F L G PI KSPSPAMHNA F+   L    TY L +T DV+++  +    N  +FGG SVTIP K  ++  L  +SP+  AIGAVNTV+  R+   G   W G NTDW GI++PI +RL                ALVVG GGT++AA+Y M  LG+ +L VFNRT +KAQ VAARF    +  LTPE++          +DVVV TIP+ AGF LP  L+ A+      VV+D AY P  T +LA A  AG    +QG EML  QG+EQF  W K
Sbjct: 1017 SDTFFLSLTFPDLNDAHSLIDDISKGADALELRVDLLKYAEDTKF-VAAQVALLRSLSTLPIIFTVRSKVQGGAFPDGEEHEKKMFELLQLGVRLGCEFVDMETCWSRKAREQLL-----AHRHRSAIISSFHAVQKPTSEAEAKAIFRECYSQGRVQIVKVVVKAYSPVDALMVDRVAKDFASAWQQHMPIISLCTTEAGKLTRVLNRTLTPVTHPLLPAAAAPGQLSIEEIMTLRKQLGLLPAREFFLFGSPIQKSPSPAMHNAGFESTSLASLFTYGLHDTTDVVEIVKRMQVPNT-NFGGGSVTIPFKVDIMEHLDELSPAARAIGAVNTVM--RQDRNGSPYWKGDNTDWLGILRPITKRLATLS---VKKPAHELTALVVGAGGTSMAASYAMRQLGVGKLFVFNRTLNKAQAVAARFEAEALSELTPETLAR--------VDVVVGTIPAQAGFQLPDHLVAARADGSKVVVLDAAYMPPVTPMLAHAHAAGGVLCIQGYEMLYEQGIEQFYRWHK 1519          
The following BLAST results are available for this feature:
BLAST of NO17G01900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24256.12.400e-28067.81pentafunctional arom polypeptide [Nannochloropsis ... [more]
CBN78053.11.000e-15051.32Bifunctional 3-dehydroquinate dehydratase/shikimat... [more]
OQR86371.11.900e-11546.77pentafunctional AROM polypeptide [Achlya hypogyna][more]
XP_012202470.12.300e-11341.06hypothetical protein SPRG_08112 [Saprolegnia paras... [more]
XP_009838843.11.100e-11046.373-phosphoshikimate 1-carboxyvinyltransferase [Apha... [more]
OQR97948.12.300e-11045.44pentafunctional AROM polypeptide [Thraustotheca cl... [more]
XP_008869352.11.200e-10941.223-phosphoshikimate 1-carboxyvinyltransferase [Apha... [more]
XP_008617870.17.500e-10941.42hypothetical protein SDRG_13554 [Saprolegnia dicli... [more]
XP_009514689.19.800e-10946.17pentafunctional aromatic amino acid protein [Phyto... [more]
XP_002896252.12.200e-10846.46pentafunctional AROM polypeptide, putative [Phytop... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002973NSK002973Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01900.1NO17G01900.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599717gene_7700Nannochloropsis oceanica (N. oceanica CCMP1779)gene
DHQ-SDHgene6249Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01900.1NO17G01900.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01900 ID=NO17G01900|Name=NO17G01900|organism=Nannochloropsis oceanica|type=gene|length=2277bp
ATGTCCTCTCCTCGGTGGCGGTACGTCGCAGCAGCAGCCCTCTTCTTCTT
GTCCGGCCTGACCGCCACAGTCGACTCCTTTCCAGTACTGAGGTGCCCGC
CATCCCCCCCCTCCTCTTCATCCAGCTCCTCGGCATCTGCCGCAAGAACG
TCAGCGTCCTTAGCATTAAATCAACACTCCTGTAAGCTCCCTTCTTCCTC
CACCTCAACTCGCCCAGCCTCCGGTCTCAGCATGCTGGCGAGTAGCATCG
CTAGCACGATATGTCGCACGGTTAGTGGCGGCAACATGGCCATTTACCTC
GTGGGTGCGACCAATCAGCGGATAGCGGTCGCGGAGGCCGTGAGCAAGGC
GGTGGGCTGGCCAGTGGTCAAGGCTACGAGTACTGCCGCCCTCCTTTCTT
CGCCCTCCATTCCTGCTATCGTTGACGTGGACGACTCTACGATAGCTGAT
GCGAAGGGCGCTGAGTTCCTGGAGGCGCAGCCACTCGTCATCCAGCTGGT
GGAGATGGAAGATTTCGCTGACAACGACGAGAAGCATAAGAGCCGGCAGG
CCGTGAGTCGTTTTGACGTAGCCGTCGGCTCGGAGCCTGACGTCCCGCTC
GCCCAAATAGTCCAGTCCATCCGACACATCACCCGCCTATCGGATGGTTT
CGGAGACGGTACAATCGATGCAAACCTTAACCTCGACCTGGGGGCTAACA
CCTTCTTCCTCTCCCTCACCTTTCCCGACATGCGGGAATGCCTCCCCTTC
CTCCCGGGCCTTGAACGGGGGGTGGACGCGTTGGAGCTTCGCGTGGACCT
CCTACAAGACCGTACCCCCTGGAGCATCCTTCGCCAGGTTGCCATTTTGA
AGTCTGCTACACAGCTCCCAATCATCTACACCGTACGCTCCAAAGACCAA
TGCGGCGCCTTCCCTAACGACGCCGAAGCCATTTTCAAGCTCCTCGGCCT
GGGTTTACGAGCAGGTGTTGAAGTCTTGGATGTGGAGGCGTGCTGGGACC
GGAAGATACGAAGTCACTTGCTGGATGCAGCGTGGCGTAGCTATAGGGGT
ACTACCCGTCTTTTGGGTTCGTATCACGTTGTGGGTCGTTCGACAACTGA
TCAGGAGGCACTACGGATTTTTCAAGAGTGCTTCCATGATGGGAGGGTGG
ATGCTGTTAAGGTTGTTTTGACTGCGAATTCGATGCGCGATGCGTATCAT
GTGCATGAACTAGCGGCTGCGGCGGGGCTGCCAGCGTCGGTGCCTGTGGT
GGCGTTGTGCTTGGGGGAGGTGGGGAAATTGAGTCGGGTTTTGAACAGTA
GATATACACCCGTTACAAACAAGCTTCTGCCTTATGTCGCCGCTCCCGGT
CAGTTGACTGCGGGAGAGATCATGAATTTTAGGAGGGATCTTGGCATGGT
CCCCTCGGCATCGTTCTGTTTGTTGGGGCATCCTATTTCGAAGTCGCCGT
CGCCTGCCATGCATAACGCGGCCTTTCAACACTGTCTGTTACCCCACACC
TATTCCCTCTTCGAGACGGAAGACGTCCTTGATCTCAAAGCCAAATACTC
AGATCAAAATGCGCAGTCCTTCGGGGGTTGTTCTGTCACTATCCCTCATA
AGCAAGCTGTGATTCCCTTGCTTCATCGTGTATCGCCCTCCGTGGACGCC
ATCGGTGCAGTCAACACAGTGGTTGTCGAGCGAGAGGCAGGCACGGGGCA
ACTCCGCTGGGTGGGGCACAATACAGATTGGAAGGGGATCGTGAAGCCCA
TTGTTCAACGTCTTCGAGAGACGGGTCGAGGGGTAACGGACGCGGAGGGG
CGGCCTCGAGTGGCCCTTGTCGTGGGGGGAGGAGGGACGGCGCTTGCGGC
AGCGTATGGCATGACCTCCCTGGGGCTACGCCTGCTTGTCTTCAATCGCA
CCCCGAGCAAGGCTCAGGATGTCGCCGCGCGCTTTGGAGGGACGGTAGTG
CATGCCCTGACGCCTGAATCTATCCTGGAAGCGACGGGTGGCCAGCAAGG
AGGTATAGATGTAGTTGTCTCCACCATTCCTTCTACCGCCGGCTTCCTCC
TACCCCCCTCTCTGCTGCGAGCACAACCAGTGGTTATGGACGTGGCATAC
CGCCCAGCGGAAACGGCGCTACTGGCACAGGCTCGCGAGGCGGGATGCCC
ATTCGTCCAGGGAGCCGAAATGTTGATTGCGCAGGGGGTGGAGCAGTTCC
AGTTGTGGACTAAGAGGCGGGCACCTGAGGCAGTGATGCGGGCAGCGGTC
TATGCCACGGTGGAGGAGTTGAAGTAG
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protein sequence of NO17G01900.1

>NO17G01900.1-protein ID=NO17G01900.1-protein|Name=NO17G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MSSPRWRYVAAAALFFLSGLTATVDSFPVLRCPPSPPSSSSSSSASAART
SASLALNQHSCKLPSSSTSTRPASGLSMLASSIASTICRTVSGGNMAIYL
VGATNQRIAVAEAVSKAVGWPVVKATSTAALLSSPSIPAIVDVDDSTIAD
AKGAEFLEAQPLVIQLVEMEDFADNDEKHKSRQAVSRFDVAVGSEPDVPL
AQIVQSIRHITRLSDGFGDGTIDANLNLDLGANTFFLSLTFPDMRECLPF
LPGLERGVDALELRVDLLQDRTPWSILRQVAILKSATQLPIIYTVRSKDQ
CGAFPNDAEAIFKLLGLGLRAGVEVLDVEACWDRKIRSHLLDAAWRSYRG
TTRLLGSYHVVGRSTTDQEALRIFQECFHDGRVDAVKVVLTANSMRDAYH
VHELAAAAGLPASVPVVALCLGEVGKLSRVLNSRYTPVTNKLLPYVAAPG
QLTAGEIMNFRRDLGMVPSASFCLLGHPISKSPSPAMHNAAFQHCLLPHT
YSLFETEDVLDLKAKYSDQNAQSFGGCSVTIPHKQAVIPLLHRVSPSVDA
IGAVNTVVVEREAGTGQLRWVGHNTDWKGIVKPIVQRLRETGRGVTDAEG
RPRVALVVGGGGTALAAAYGMTSLGLRLLVFNRTPSKAQDVAARFGGTVV
HALTPESILEATGGQQGGIDVVVSTIPSTAGFLLPPSLLRAQPVVMDVAY
RPAETALLAQAREAGCPFVQGAEMLIAQGVEQFQLWTKRRAPEAVMRAAV
YATVEELK*
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Synonyms
Publications