NO17G01890, NO17G01890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01890 vs. NCBI_GenBank
Match: EWM24278.1 (Prohibitin [Nannochloropsis gaditana]) HSP 1 Score: 483.8 bits (1244), Expect = 3.600e-133 Identity = 259/275 (94.18%), Postives = 267/275 (97.09%), Query Frame = 0 Query: 1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ 276 MEALLGRVA+LGAGVAGAAFVGNNFLFNVEGG+RAVVFDRF GVLPKPL EGTSIVIPVLQSA+LFDVR+KPRVINSVTGTKDLQHVNISLRVLSRPVEQ LPEIFSKIG D DERVLPGVGNEVLKAVVAQYNAEELLSKREQIS QIR+NLIKRA EFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMY+VQRADQERKAVVIRAEGEAEAA KISKAVAD+G+ALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ Sbjct: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ 275
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_009035488.1 (hypothetical protein AURANDRAFT_59995 [Aureococcus anophagefferens] >EGB09418.1 hypothetical protein AURANDRAFT_59995 [Aureococcus anophagefferens]) HSP 1 Score: 340.5 bits (872), Expect = 4.900e-90 Identity = 179/274 (65.33%), Postives = 220/274 (80.29%), Query Frame = 0 Query: 1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSG---LLLGL 272 ME +L VARLG GVAG +F+G+N L+NVEGG+RAV+FD GVLPKP+ EGT IPVLQ+ + D+R++PR I SVTGTKDLQ VNI LRVLSRP E+ LP+I+ +G + D+RVLP +GNEVLK+VVAQYNA++LLS REQIS QIR L KRA F+LILDDVSITHL F KEFT AIEQKQVA+Q+AERQ Y+V +A+QE+KA +IRAEGEAEAA ISKA+ GS LIE+RRIDAAR++A+ LS++R +TYLP G + G +LLGL Sbjct: 1 MEKVLTGVARLGMGVAGVSFIGSNCLYNVEGGHRAVMFDNIRGVLPKPISEGTGFKIPVLQTPIIMDIRSRPREIKSVTGTKDLQMVNIYLRVLSRPREEALPKIYMTLGTNFDDRVLPSLGNEVLKSVVAQYNADQLLSMREQISQQIRSTLTKRAEAFNLILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGL 274
BLAST of NO17G01890 vs. NCBI_GenBank
Match: CBJ25476.1 (Prohibitin complex subunit 1 [Ectocarpus siliculosus]) HSP 1 Score: 313.5 bits (802), Expect = 6.400e-82 Identity = 171/270 (63.33%), Postives = 206/270 (76.30%), Query Frame = 0 Query: 2 EALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGL 272 E LL V+RLG GV A LFNV+GG RAV+FDRF GV + EGT +IP++Q + DVRA+PR INS+TGTKDLQ NISLRVLSRP+E +LP I+ ++G D D+RVLP +GNEVLKAVVA+YNAEELLSKRE +S +IR L RA +FHLI+DDVSITHLTF EFTKAIE KQVA+Q+AERQ+Y+V +DQER A +IRAEGEAEAA IS A+ + G LIE+RRID A++IA L+ SRNITYLP G S +LLGL Sbjct: 3 EKLLQNVSRLG-GVVAIAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPIVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGL 271
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_002289569.1 (hypothetical protein THAPSDRAFT_26224 [Thalassiosira pseudonana CCMP1335] >EED93106.1 hypothetical protein THAPSDRAFT_26224 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 304.3 bits (778), Expect = 3.900e-79 Identity = 163/266 (61.28%), Postives = 205/266 (77.07%), Query Frame = 0 Query: 1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRF-NGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNS 266 M+ +L RV+ +A AF N+ L+NV+GG RAV+FD G+LP EEGT +IP++Q + DVR KPR I SVTGTKDLQ VNI LRVL RPV +KLP+++ ++G D DERVLP +GNEVLK+VVAQYNAEELLSKR ++S +I+ LIKR + FHL LDDV+ITHLTF +EF KAIEQKQVA Q+AERQ Y+V RA+QER A V RAEGEAEAA I+KA+ G+A++E+RRIDAA++IA L++ RNITYLPGG +S Sbjct: 1 MDKILSRVSTAAGALAAGAFTVNSCLYNVDGGERAVLFDTLRGGILPDVREEGTHFIIPMVQRPIIIDVRTKPREIPSVTGTKDLQMVNIKLRVLWRPVIEKLPQLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKRAEVSARIKAELIKRGAHFHLTLDDVAITHLTFGREFMKAIEQKQVAFQEAERQQYVVLRAEQERIASVTRAEGEAEAATIITKAMEKTGNAIVEVRRIDAAKEIATKLARGRNITYLPGGTSS 266
BLAST of NO17G01890 vs. NCBI_GenBank
Match: EJK64680.1 (hypothetical protein THAOC_14563 [Thalassiosira oceanica]) HSP 1 Score: 301.2 bits (770), Expect = 3.300e-78 Identity = 161/263 (61.22%), Postives = 202/263 (76.81%), Query Frame = 0 Query: 1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRF-NGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGG 263 M+ +L R++ + AF N+ L+NV+GG RAV+FD G+LP +EGT ++IPV+Q + DVR KPR I SVTGTKDLQ VNI LRVL RPV +KLP+++ ++G D DERVLP +GNEVLK+VVAQYNAEELLSKR ++S +I+ LIKR + FHL LDDVSITHLTF +EF KAIE KQVA Q+AERQ Y+V RA+QER A V RAEGEAEAA I+KA+ G+A++E+RRIDAA++IA L+K RNITYLPGG Sbjct: 1 MDKVLSRISSAAGALTVGAFTVNSCLYNVDGGERAVLFDTLRGGILPDVRDEGTHLMIPVIQRPIIIDVRTKPREIPSVTGTKDLQMVNIKLRVLWRPVIEKLPQLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKRAEVSARIKAELIKRGAHFHLTLDDVSITHLTFGREFMKAIESKQVASQEAERQQYVVMRAEQERIANVTRAEGEAEAATIITKAMEKTGNAIVEVRRIDAAKEIATKLAKGRNITYLPGG 263
BLAST of NO17G01890 vs. NCBI_GenBank
Match: GAX74679.1 (hypothetical protein CEUSTIGMA_g2127.t1 [Chlamydomonas eustigma]) HSP 1 Score: 300.8 bits (769), Expect = 4.300e-78 Identity = 156/271 (57.56%), Postives = 206/271 (76.01%), Query Frame = 0 Query: 5 LGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ 276 L +V R G+ A L+ V+GG RAV+FDRF GVLP+P+ EGT IP +Q+ + DVR +PR INSVTGTKDLQ VN+SLR+LS+P E +LP IF +G+D DERVLP +GNEV+K+VVAQYNAE+LL++RE++S +R +L+ RA++F + L+DV+ITHL+F EFTKA+EQKQVAEQDAER ++V A+QER A +IRAEGE+EAA IS+A +G LIE+RRI+AA+DIAD ++KSRN+ YLPGG N +LL + Q Sbjct: 14 LNKVVRYAVGLGITASALQTSLYTVDGGERAVIFDRFRGVLPEPVGEGTHFRIPWVQTPNIMDVRTRPRTINSVTGTKDLQMVNMSLRILSKPHEARLPSIFQNLGLDWDERVLPSIGNEVVKSVVAQYNAEQLLTQREKVSRAVRESLMTRAADFGITLEDVAITHLSFGVEFTKAVEQKQVAEQDAERAKFVVMLAEQERNAAIIRAEGESEAASLISEATRQFGGGLIELRRIEAAKDIADTMAKSRNVVYLPGGGN--MLLNVNPNQ 282
BLAST of NO17G01890 vs. NCBI_GenBank
Match: GAA88589.1 (prohibitin [Aspergillus kawachii IFO 4308] >GAQ41852.1 prohibitin [Aspergillus niger] >GAT28590.1 prohibitin [Aspergillus luchuensis] >OJI91083.1 hypothetical protein ASPTUDRAFT_111444 [Aspergillus tubingensis CBS 134.48] >OJZ88496.1 hypothetical protein ASPFODRAFT_59252 [Aspergillus luchuensis CBS 106.47]) HSP 1 Score: 298.1 bits (762), Expect = 2.800e-77 Identity = 157/277 (56.68%), Postives = 215/277 (77.62%), Query Frame = 0 Query: 1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP------GGQNSGLLLGL 272 M LL +V RL ++ ++ N+ +++V GG RAV+FDR +GV K + EGT +IP LQ A ++DVR KPR I++ TG+KDLQ V+++LRVL RP KLP I+ GID DERVLP +GNEVLKA+VAQ++A EL+++RE +S++IR +L+KRAS+F++ L+DVSITH+TF KEFT+A+EQKQ+A+QDAER ++V+RA+QER+A VIRAEGEAE+A ISKAVA GS LIEIRRIDA+++IA L+ + N+TYLP GG+++ LLLGL Sbjct: 1 MSTLLQQVYRLAVPISAGVYLFNSSIYDVRGGTRAVIFDRLSGVQEKVMNEGTHFLIPWLQRAIIYDVRTKPRNISTTTGSKDLQMVSLTLRVLHRPEVPKLPAIYQSYGIDYDERVLPSIGNEVLKAIVAQFDAAELITQREAVSNRIRTDLMKRASQFNIALEDVSITHMTFGKEFTRAVEQKQIAQQDAERARFIVERAEQERQANVIRAEGEAESADIISKAVAKAGSGLIEIRRIDASKEIATTLANNPNVTYLPGNDGKEGGKSTSLLLGL 277
BLAST of NO17G01890 vs. NCBI_GenBank
Match: KOO29328.1 (prohibitin [Chrysochromulina sp. CCMP291]) HSP 1 Score: 298.1 bits (762), Expect = 2.800e-77 Identity = 164/273 (60.07%), Postives = 210/273 (76.92%), Query Frame = 0 Query: 5 LGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP-GGQNSGLLLGLTAGQA 277 L +AR G+ AA + LFNV+GG+RAV+F+R GV + EGT IP LQ+ +LFDVR KPR I+S TGTKDLQ V I+LRVLSRP E+ LP+IFS +G+D DERVLP +GNEVLKAVVAQYNAE L++KRE +SH++R L KRA+EFH+ LDDV+IT L F KEFT AIE KQVAEQDAER +LV++A+QE+KA +IRAEGEA AA +S+A+ AL+E+RRI+AA++IA+ LSKSRN+TYLP GGQN +LL +++ + Sbjct: 6 LNNLARGAIGIGAAASLAQASLFNVDGGFRAVMFNRLQGVQKGVIGEGTHFRIPWLQTPHLFDVRIKPRNISSSTGTKDLQVVTINLRVLSRPDEEFLPDIFSSLGLDYDERVLPSIGNEVLKAVVAQYNAEALITKRETVSHEVRTALTKRANEFHIKLDDVAITDLKFGKEFTSAIESKQVAEQDAERARFLVEKAEQEKKAAIIRAEGEATAAAVVSEALQG-SPALVELRRIEAAKEIAETLSKSRNVTYLPSGGQN--MLLNISSASS 275
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_001392769.1 (prohibitin-1 [Aspergillus niger CBS 513.88] >CAK45624.1 unnamed protein product [Aspergillus niger] >EHA18205.1 hypothetical protein ASPNIDRAFT_55755 [Aspergillus niger ATCC 1015] >OWW28541.1 SPFH domain / Band 7 family protein [Aspergillus niger] >SPB52526.1 unnamed protein product [Aspergillus niger]) HSP 1 Score: 297.0 bits (759), Expect = 6.200e-77 Identity = 155/277 (55.96%), Postives = 214/277 (77.26%), Query Frame = 0 Query: 1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP------GGQNSGLLLGL 272 M L ++ RL ++ ++ N+ +++V GG RAV+FDR +GV K + EGT +IP LQ A ++DVR KPR I++ TG+KDLQ V+++LRVL RP KLP I+ GID DERVLP +GNEVLKA+VAQ++A EL+++RE +S++IR +L+KRAS+F++ L+DVSITH+TF KEFT+A+EQKQ+A+QDAER ++V+RA+QER+A VIRAEGEAE+A ISKAVA GS LIEIRRIDA+++IA L+ + N+TYLP GG+++ LLLGL Sbjct: 1 MSTFLQQIYRLAVPISAGVYIFNSSIYDVRGGTRAVIFDRLSGVQEKVMNEGTHFLIPWLQRAIIYDVRTKPRNISTTTGSKDLQMVSLTLRVLHRPEVPKLPAIYQSYGIDYDERVLPSIGNEVLKAIVAQFDAAELITQREAVSNRIRTDLMKRASQFNIALEDVSITHMTFGKEFTRAVEQKQIAQQDAERARFIVERAEQERQANVIRAEGEAESADIISKAVAKAGSGLIEIRRIDASKEIATTLANNPNVTYLPGNDGKEGGKSTSLLLGL 277
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_015410546.1 (prohibitin-1, partial [Aspergillus nomius NRRL 13137] >KNG89623.1 prohibitin-1, partial [Aspergillus nomius NRRL 13137]) HSP 1 Score: 296.6 bits (758), Expect = 8.100e-77 Identity = 158/273 (57.88%), Postives = 211/273 (77.29%), Query Frame = 0 Query: 5 LGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP------GGQNSGLLLGL 272 L + RL VA A + NN +++V GG RAV+FDR +GV K + EGT +IP LQ A ++DVR KPR I++ TG+KDLQ V+++LRVL RP KLP I+ G D DERVLP +GNEVLKA+VAQ++A EL+++RE +S++IR +L+KRA++F++ L+DVSITH+TF KEFT+A+EQKQ+A+QDAER ++V+RA+QER+A VIRAEGEAE+A ISKAVA GS LIEIRRIDA+++IA LS + N+TYLP GG+N+ LLLGL Sbjct: 13 LYNIYRLALPVATGALIFNNSIYDVRGGSRAVIFDRLSGVQEKVVNEGTHFLIPWLQKAIVYDVRTKPRNISTTTGSKDLQMVSLTLRVLHRPEVPKLPAIYQSYGTDYDERVLPSIGNEVLKAIVAQFDAAELITQREAVSNRIRTDLMKRAAQFNIALEDVSITHMTFGKEFTRAVEQKQIAQQDAERARFIVERAEQERQANVIRAEGEAESADIISKAVAKAGSGLIEIRRIDASKEIAQTLSTNPNVTYLPGNDGKEGGKNTSLLLGL 285 The following BLAST results are available for this feature:
BLAST of NO17G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01890 ID=NO17G01890|Name=NO17G01890|organism=Nannochloropsis oceanica|type=gene|length=1490bpback to top protein sequence of NO17G01890.1 >NO17G01890.1-protein ID=NO17G01890.1-protein|Name=NO17G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top Synonyms
Publications
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