NO17G01890, NO17G01890 (gene) Nannochloropsis oceanica

Overview
NameNO17G01890
Unique NameNO17G01890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1490
Alignment locationchr17:544670..546159 +

Link to JBrowse

Properties
Property NameValue
DescriptionProhibitin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:544670..546159 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036013Band_7/SPFH_dom_sf
IPR001107Band_7
IPR000163Prohibitin
Homology
BLAST of NO17G01890 vs. NCBI_GenBank
Match: EWM24278.1 (Prohibitin [Nannochloropsis gaditana])

HSP 1 Score: 483.8 bits (1244), Expect = 3.600e-133
Identity = 259/275 (94.18%), Postives = 267/275 (97.09%), Query Frame = 0
Query:    1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ 276
            MEALLGRVA+LGAGVAGAAFVGNNFLFNVEGG+RAVVFDRF GVLPKPL EGTSIVIPVLQSA+LFDVR+KPRVINSVTGTKDLQHVNISLRVLSRPVEQ LPEIFSKIG D DERVLPGVGNEVLKAVVAQYNAEELLSKREQIS QIR+NLIKRA EFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMY+VQRADQERKAVVIRAEGEAEAA KISKAVAD+G+ALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ
Sbjct:    1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ 275          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_009035488.1 (hypothetical protein AURANDRAFT_59995 [Aureococcus anophagefferens] >EGB09418.1 hypothetical protein AURANDRAFT_59995 [Aureococcus anophagefferens])

HSP 1 Score: 340.5 bits (872), Expect = 4.900e-90
Identity = 179/274 (65.33%), Postives = 220/274 (80.29%), Query Frame = 0
Query:    1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSG---LLLGL 272
            ME +L  VARLG GVAG +F+G+N L+NVEGG+RAV+FD   GVLPKP+ EGT   IPVLQ+  + D+R++PR I SVTGTKDLQ VNI LRVLSRP E+ LP+I+  +G + D+RVLP +GNEVLK+VVAQYNA++LLS REQIS QIR  L KRA  F+LILDDVSITHL F KEFT AIEQKQVA+Q+AERQ Y+V +A+QE+KA +IRAEGEAEAA  ISKA+   GS LIE+RRIDAAR++A+ LS++R +TYLP G + G   +LLGL
Sbjct:    1 MEKVLTGVARLGMGVAGVSFIGSNCLYNVEGGHRAVMFDNIRGVLPKPISEGTGFKIPVLQTPIIMDIRSRPREIKSVTGTKDLQMVNIYLRVLSRPREEALPKIYMTLGTNFDDRVLPSLGNEVLKSVVAQYNADQLLSMREQISQQIRSTLTKRAEAFNLILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGL 274          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: CBJ25476.1 (Prohibitin complex subunit 1 [Ectocarpus siliculosus])

HSP 1 Score: 313.5 bits (802), Expect = 6.400e-82
Identity = 171/270 (63.33%), Postives = 206/270 (76.30%), Query Frame = 0
Query:    2 EALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGL 272
            E LL  V+RLG GV   A      LFNV+GG RAV+FDRF GV    + EGT  +IP++Q   + DVRA+PR INS+TGTKDLQ  NISLRVLSRP+E +LP I+ ++G D D+RVLP +GNEVLKAVVA+YNAEELLSKRE +S +IR  L  RA +FHLI+DDVSITHLTF  EFTKAIE KQVA+Q+AERQ+Y+V  +DQER A +IRAEGEAEAA  IS A+ + G  LIE+RRID A++IA  L+ SRNITYLP G  S +LLGL
Sbjct:    3 EKLLQNVSRLG-GVVAIAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPIVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGL 271          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_002289569.1 (hypothetical protein THAPSDRAFT_26224 [Thalassiosira pseudonana CCMP1335] >EED93106.1 hypothetical protein THAPSDRAFT_26224 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 304.3 bits (778), Expect = 3.900e-79
Identity = 163/266 (61.28%), Postives = 205/266 (77.07%), Query Frame = 0
Query:    1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRF-NGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNS 266
            M+ +L RV+     +A  AF  N+ L+NV+GG RAV+FD    G+LP   EEGT  +IP++Q   + DVR KPR I SVTGTKDLQ VNI LRVL RPV +KLP+++ ++G D DERVLP +GNEVLK+VVAQYNAEELLSKR ++S +I+  LIKR + FHL LDDV+ITHLTF +EF KAIEQKQVA Q+AERQ Y+V RA+QER A V RAEGEAEAA  I+KA+   G+A++E+RRIDAA++IA  L++ RNITYLPGG +S
Sbjct:    1 MDKILSRVSTAAGALAAGAFTVNSCLYNVDGGERAVLFDTLRGGILPDVREEGTHFIIPMVQRPIIIDVRTKPREIPSVTGTKDLQMVNIKLRVLWRPVIEKLPQLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKRAEVSARIKAELIKRGAHFHLTLDDVAITHLTFGREFMKAIEQKQVAFQEAERQQYVVLRAEQERIASVTRAEGEAEAATIITKAMEKTGNAIVEVRRIDAAKEIATKLARGRNITYLPGGTSS 266          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: EJK64680.1 (hypothetical protein THAOC_14563 [Thalassiosira oceanica])

HSP 1 Score: 301.2 bits (770), Expect = 3.300e-78
Identity = 161/263 (61.22%), Postives = 202/263 (76.81%), Query Frame = 0
Query:    1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRF-NGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGG 263
            M+ +L R++     +   AF  N+ L+NV+GG RAV+FD    G+LP   +EGT ++IPV+Q   + DVR KPR I SVTGTKDLQ VNI LRVL RPV +KLP+++ ++G D DERVLP +GNEVLK+VVAQYNAEELLSKR ++S +I+  LIKR + FHL LDDVSITHLTF +EF KAIE KQVA Q+AERQ Y+V RA+QER A V RAEGEAEAA  I+KA+   G+A++E+RRIDAA++IA  L+K RNITYLPGG
Sbjct:    1 MDKVLSRISSAAGALTVGAFTVNSCLYNVDGGERAVLFDTLRGGILPDVRDEGTHLMIPVIQRPIIIDVRTKPREIPSVTGTKDLQMVNIKLRVLWRPVIEKLPQLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKRAEVSARIKAELIKRGAHFHLTLDDVSITHLTFGREFMKAIESKQVASQEAERQQYVVMRAEQERIANVTRAEGEAEAATIITKAMEKTGNAIVEVRRIDAAKEIATKLAKGRNITYLPGG 263          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: GAX74679.1 (hypothetical protein CEUSTIGMA_g2127.t1 [Chlamydomonas eustigma])

HSP 1 Score: 300.8 bits (769), Expect = 4.300e-78
Identity = 156/271 (57.56%), Postives = 206/271 (76.01%), Query Frame = 0
Query:    5 LGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ 276
            L +V R   G+   A      L+ V+GG RAV+FDRF GVLP+P+ EGT   IP +Q+  + DVR +PR INSVTGTKDLQ VN+SLR+LS+P E +LP IF  +G+D DERVLP +GNEV+K+VVAQYNAE+LL++RE++S  +R +L+ RA++F + L+DV+ITHL+F  EFTKA+EQKQVAEQDAER  ++V  A+QER A +IRAEGE+EAA  IS+A   +G  LIE+RRI+AA+DIAD ++KSRN+ YLPGG N  +LL +   Q
Sbjct:   14 LNKVVRYAVGLGITASALQTSLYTVDGGERAVIFDRFRGVLPEPVGEGTHFRIPWVQTPNIMDVRTRPRTINSVTGTKDLQMVNMSLRILSKPHEARLPSIFQNLGLDWDERVLPSIGNEVVKSVVAQYNAEQLLTQREKVSRAVRESLMTRAADFGITLEDVAITHLSFGVEFTKAVEQKQVAEQDAERAKFVVMLAEQERNAAIIRAEGESEAASLISEATRQFGGGLIELRRIEAAKDIADTMAKSRNVVYLPGGGN--MLLNVNPNQ 282          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: GAA88589.1 (prohibitin [Aspergillus kawachii IFO 4308] >GAQ41852.1 prohibitin [Aspergillus niger] >GAT28590.1 prohibitin [Aspergillus luchuensis] >OJI91083.1 hypothetical protein ASPTUDRAFT_111444 [Aspergillus tubingensis CBS 134.48] >OJZ88496.1 hypothetical protein ASPFODRAFT_59252 [Aspergillus luchuensis CBS 106.47])

HSP 1 Score: 298.1 bits (762), Expect = 2.800e-77
Identity = 157/277 (56.68%), Postives = 215/277 (77.62%), Query Frame = 0
Query:    1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP------GGQNSGLLLGL 272
            M  LL +V RL   ++   ++ N+ +++V GG RAV+FDR +GV  K + EGT  +IP LQ A ++DVR KPR I++ TG+KDLQ V+++LRVL RP   KLP I+   GID DERVLP +GNEVLKA+VAQ++A EL+++RE +S++IR +L+KRAS+F++ L+DVSITH+TF KEFT+A+EQKQ+A+QDAER  ++V+RA+QER+A VIRAEGEAE+A  ISKAVA  GS LIEIRRIDA+++IA  L+ + N+TYLP      GG+++ LLLGL
Sbjct:    1 MSTLLQQVYRLAVPISAGVYLFNSSIYDVRGGTRAVIFDRLSGVQEKVMNEGTHFLIPWLQRAIIYDVRTKPRNISTTTGSKDLQMVSLTLRVLHRPEVPKLPAIYQSYGIDYDERVLPSIGNEVLKAIVAQFDAAELITQREAVSNRIRTDLMKRASQFNIALEDVSITHMTFGKEFTRAVEQKQIAQQDAERARFIVERAEQERQANVIRAEGEAESADIISKAVAKAGSGLIEIRRIDASKEIATTLANNPNVTYLPGNDGKEGGKSTSLLLGL 277          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: KOO29328.1 (prohibitin [Chrysochromulina sp. CCMP291])

HSP 1 Score: 298.1 bits (762), Expect = 2.800e-77
Identity = 164/273 (60.07%), Postives = 210/273 (76.92%), Query Frame = 0
Query:    5 LGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP-GGQNSGLLLGLTAGQA 277
            L  +AR   G+  AA +    LFNV+GG+RAV+F+R  GV    + EGT   IP LQ+ +LFDVR KPR I+S TGTKDLQ V I+LRVLSRP E+ LP+IFS +G+D DERVLP +GNEVLKAVVAQYNAE L++KRE +SH++R  L KRA+EFH+ LDDV+IT L F KEFT AIE KQVAEQDAER  +LV++A+QE+KA +IRAEGEA AA  +S+A+     AL+E+RRI+AA++IA+ LSKSRN+TYLP GGQN  +LL +++  +
Sbjct:    6 LNNLARGAIGIGAAASLAQASLFNVDGGFRAVMFNRLQGVQKGVIGEGTHFRIPWLQTPHLFDVRIKPRNISSSTGTKDLQVVTINLRVLSRPDEEFLPDIFSSLGLDYDERVLPSIGNEVLKAVVAQYNAEALITKRETVSHEVRTALTKRANEFHIKLDDVAITDLKFGKEFTSAIESKQVAEQDAERARFLVEKAEQEKKAAIIRAEGEATAAAVVSEALQG-SPALVELRRIEAAKEIAETLSKSRNVTYLPSGGQN--MLLNISSASS 275          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_001392769.1 (prohibitin-1 [Aspergillus niger CBS 513.88] >CAK45624.1 unnamed protein product [Aspergillus niger] >EHA18205.1 hypothetical protein ASPNIDRAFT_55755 [Aspergillus niger ATCC 1015] >OWW28541.1 SPFH domain / Band 7 family protein [Aspergillus niger] >SPB52526.1 unnamed protein product [Aspergillus niger])

HSP 1 Score: 297.0 bits (759), Expect = 6.200e-77
Identity = 155/277 (55.96%), Postives = 214/277 (77.26%), Query Frame = 0
Query:    1 MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP------GGQNSGLLLGL 272
            M   L ++ RL   ++   ++ N+ +++V GG RAV+FDR +GV  K + EGT  +IP LQ A ++DVR KPR I++ TG+KDLQ V+++LRVL RP   KLP I+   GID DERVLP +GNEVLKA+VAQ++A EL+++RE +S++IR +L+KRAS+F++ L+DVSITH+TF KEFT+A+EQKQ+A+QDAER  ++V+RA+QER+A VIRAEGEAE+A  ISKAVA  GS LIEIRRIDA+++IA  L+ + N+TYLP      GG+++ LLLGL
Sbjct:    1 MSTFLQQIYRLAVPISAGVYIFNSSIYDVRGGTRAVIFDRLSGVQEKVMNEGTHFLIPWLQRAIIYDVRTKPRNISTTTGSKDLQMVSLTLRVLHRPEVPKLPAIYQSYGIDYDERVLPSIGNEVLKAIVAQFDAAELITQREAVSNRIRTDLMKRASQFNIALEDVSITHMTFGKEFTRAVEQKQIAQQDAERARFIVERAEQERQANVIRAEGEAESADIISKAVAKAGSGLIEIRRIDASKEIATTLANNPNVTYLPGNDGKEGGKSTSLLLGL 277          
BLAST of NO17G01890 vs. NCBI_GenBank
Match: XP_015410546.1 (prohibitin-1, partial [Aspergillus nomius NRRL 13137] >KNG89623.1 prohibitin-1, partial [Aspergillus nomius NRRL 13137])

HSP 1 Score: 296.6 bits (758), Expect = 8.100e-77
Identity = 158/273 (57.88%), Postives = 211/273 (77.29%), Query Frame = 0
Query:    5 LGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLEEGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQKLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIRMNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQRADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADILSKSRNITYLP------GGQNSGLLLGL 272
            L  + RL   VA  A + NN +++V GG RAV+FDR +GV  K + EGT  +IP LQ A ++DVR KPR I++ TG+KDLQ V+++LRVL RP   KLP I+   G D DERVLP +GNEVLKA+VAQ++A EL+++RE +S++IR +L+KRA++F++ L+DVSITH+TF KEFT+A+EQKQ+A+QDAER  ++V+RA+QER+A VIRAEGEAE+A  ISKAVA  GS LIEIRRIDA+++IA  LS + N+TYLP      GG+N+ LLLGL
Sbjct:   13 LYNIYRLALPVATGALIFNNSIYDVRGGSRAVIFDRLSGVQEKVVNEGTHFLIPWLQKAIVYDVRTKPRNISTTTGSKDLQMVSLTLRVLHRPEVPKLPAIYQSYGTDYDERVLPSIGNEVLKAIVAQFDAAELITQREAVSNRIRTDLMKRAAQFNIALEDVSITHMTFGKEFTRAVEQKQIAQQDAERARFIVERAEQERQANVIRAEGEAESADIISKAVAKAGSGLIEIRRIDASKEIAQTLSTNPNVTYLPGNDGKEGGKNTSLLLGL 285          
The following BLAST results are available for this feature:
BLAST of NO17G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24278.13.600e-13394.18Prohibitin [Nannochloropsis gaditana][more]
XP_009035488.14.900e-9065.33hypothetical protein AURANDRAFT_59995 [Aureococcus... [more]
CBJ25476.16.400e-8263.33Prohibitin complex subunit 1 [Ectocarpus siliculos... [more]
XP_002289569.13.900e-7961.28hypothetical protein THAPSDRAFT_26224 [Thalassiosi... [more]
EJK64680.13.300e-7861.22hypothetical protein THAOC_14563 [Thalassiosira oc... [more]
GAX74679.14.300e-7857.56hypothetical protein CEUSTIGMA_g2127.t1 [Chlamydom... [more]
GAA88589.12.800e-7756.68prohibitin [Aspergillus kawachii IFO 4308] >GAQ418... [more]
KOO29328.12.800e-7760.07prohibitin [Chrysochromulina sp. CCMP291][more]
XP_001392769.16.200e-7755.96prohibitin-1 [Aspergillus niger CBS 513.88] >CAK45... [more]
XP_015410546.18.100e-7757.88prohibitin-1, partial [Aspergillus nomius NRRL 131... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002972NSK002972Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01890.1NO17G01890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599720gene_7701Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100020g11gene6248Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01890.1NO17G01890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01890 ID=NO17G01890|Name=NO17G01890|organism=Nannochloropsis oceanica|type=gene|length=1490bp
ACAGCGACGCCACGACCATCGTCCCTTTCCGCTCCCAACATTCTCAGCAC
TAGATACTGCGCCCTTTGTTAGGGAAGGAATAGGAACGAGTACACCGTCA
AGgtacgcattctcgtcatgagcgaccatcacgtatatgcctctccagtt
acttgatcaagagccgtggggctctgctggacgagtgaaaaaatgcagtg
agaaaggaaaagcacccgcatcattatcgttatcatgactcactcatccc
ttcctccctgtcacaccacagGTACAGACGCTAGATAGTAAGATGGAGGC
ACTTCTAGGCCGTGTCGCAAGACTAGGCGCTGGTGTGGCAGGGGCAGCTT
TTGTGGGCAACAACTTTTTGTTCAACGgtaggtcgtttgtgactcccacc
ccagagaggacgaggacagggcctgcacgcacatcacatttacttgcgga
ggcatgcataccaacttttcggcaaaacgccctttgacatcaagatccct
ttcagcactcaccctttctgctctccctccatcctctttcccaaaatctc
agTGGAAGGCGGGTACCGCGCAGTGGTCTTCGATCGGTTCAACGGGGTGC
TCCCGAAGCCATTGGAGGAAGGCACGAGCATCGTTATTCCTGTTCTCCAG
AGCGCCTACCTGTTCGACGTCCGTGCCAAACCGCGTGTCATTAACTCCGT
CACGGGAACCAAGGACCTGCAACACGTCAACATCTCCCTCCGTGTCCTCT
CCAGGCCCGTCGAGCAGAAGCTCCCCGAGATTTTCTCCAAGATCGGTATT
GACATCGACGAGCGAGTCCTGCCCGGTGTGGGGAATGAGGTACTGAAAGC
TGTCGTTGCCCAGTACAATGCCGAAGAGCTGTTGAGCAAGCGTGAGCAGA
TCTCTCACCAGATCCGCATGAACCTTATCAAGCGCGCCAGCGAATTTCAC
CTTATTTTGGACGACGTCTCCATCACCCACTTGACCTTTTCCAAGGAGTT
CACCAAGGCCATCGAGCAAAAGCAGGTGGCGGAGCAGGATGCCGAGCGAC
AGATGTACTTGGTGCAGCGGGCGGACCAGGAGCGAAAGGCGGTGGTTATC
CGCGCCGAGGGTGAGGCTGAGGCCGCCGGCAAGATCTCCAAGGCAGTGGC
AGACTACGGGAGCGCCTTGATTGAGATCCGACGAATTGATGCTGCGCGTG
ACATTGCCGATATTCTGAGTAAGAGTCGCAATATCACTTATCTTCCTGGT
GGACAGAACTCGGGTCTGCTTTTGGGCTTGACGGCGGGGCAGGCGTAAAG
GATAAGTAAACGGAGGGAGGGGGAAATAGAGCGGGAGGGAGATGAGTTGA
GGAAAGACCCGTAGAAGTGTACTCAACGGGCCCCTTTATTTGGGAGGAAA
TGGGTCAAAACCAGAAAGAAAGAGGATGAGAGAAGAGAAGATACAACTAA
AACAACAACGACATCCGAAAGAAAGAAACGAACGACAGAA
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protein sequence of NO17G01890.1

>NO17G01890.1-protein ID=NO17G01890.1-protein|Name=NO17G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bp
MEALLGRVARLGAGVAGAAFVGNNFLFNVEGGYRAVVFDRFNGVLPKPLE
EGTSIVIPVLQSAYLFDVRAKPRVINSVTGTKDLQHVNISLRVLSRPVEQ
KLPEIFSKIGIDIDERVLPGVGNEVLKAVVAQYNAEELLSKREQISHQIR
MNLIKRASEFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYLVQ
RADQERKAVVIRAEGEAEAAGKISKAVADYGSALIEIRRIDAARDIADIL
SKSRNITYLPGGQNSGLLLGLTAGQA*
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Synonyms
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