NO17G01880, NO17G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01880 vs. NCBI_GenBank
Match: KUF88525.1 (hypothetical protein AM588_10006935 [Phytophthora nicotianae]) HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52 Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581 W+R++ + ++APIIQ IL A + A TE G++ + ++ D++ DA+ E+WETSQNP VY+LSS++D L ET +G+A++EIRRA+P+F++E+W + E LP +A+L+G+ + LK + E Y ++ R RK+EGL +DPHVL I N E+++A D Q P++++ Q INC+RNREG++VEG EDEV A +Y+ F R+YDE++ L+W+I + ++ Sbjct: 220 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 448
BLAST of NO17G01880 vs. NCBI_GenBank
Match: KUF99749.1 (Meiotic recombination protein DMC1 [Phytophthora nicotianae]) HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52 Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581 W+R++ + ++APIIQ IL A + A TE G++ + ++ D++ DA+ E+WETSQNP VY+LSS++D L ET +G+A++EIRRA+P+F++E+W + E LP +A+L+G+ + LK + E Y ++ R RK+EGL +DPHVL I N E+++A D Q P++++ Q INC+RNREG++VEG EDEV A +Y+ F R+YDE++ L+W+I + ++ Sbjct: 220 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 448
BLAST of NO17G01880 vs. NCBI_GenBank
Match: OWZ22428.1 (Mitochondrial Protein Translocase [Phytophthora megakarya]) HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52 Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581 W+R++ + ++APIIQ IL A + A TE G++ K ++ D++ DA+ E+WETSQNP VY+LSS++D L ET +G+A++EIRRA+P+F++E+W + E LP +A+L+G+ + LK + E Y ++ R RK+EGL +DPHVL I N E+++A D Q P++++ Q INC+RNREG++VEG EDEV A +Y+ F R+YD+++ L+W+I + ++ Sbjct: 249 WQRVSARFREAPIIQGILDAAKQAAKTEAGQKVQKTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDDEQETLRWRIVDLHM 477
BLAST of NO17G01880 vs. NCBI_GenBank
Match: XP_009821831.1 (hypothetical protein H257_00717 [Aphanomyces astaci] >ETV89431.1 hypothetical protein H257_00717 [Aphanomyces astaci]) HSP 1 Score: 213.8 bits (543), Expect = 1.500e-51 Identity = 107/236 (45.34%), Postives = 153/236 (64.83%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTE----LGRQAGKLRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 588 WER+A +L++ PIIQ +L A + A TE LG A K R K+ D ED RE WETSQNP VY++SS++D L ET IA++EIRRADP F +E W + E+ +P A+L+G+ + LK ++ E Y + R RKA+GL +DP++L I N ++ D Q P++ + + Q INC+RNREG+IVEG +D+++A+FY+ F REYDE+ AL+WKI E + S P+I Sbjct: 182 WERVASRLRETPIIQGLLDAANQAAKTEAGKVLGSTAKKARDKVGDATEDVREYWETSQNPWVYRMSSIYDGLFGETPESIAIKEIRRADPSFDVETWKDAVAENVVPHVLDAFLRGNSRDLKQWMGEAAYNTVNMAIRERKADGLVVDPNILAIRNVTVIALSAEDKQAPIIGIQLMAQQINCIRNREGEIVEGADDDIQANFYIFAFRREYDEEASALKWKIVEFGVIGSVPYI 417
BLAST of NO17G01880 vs. NCBI_GenBank
Match: XP_002997475.1 (Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4] >EEY68783.1 Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4]) HSP 1 Score: 213.8 bits (543), Expect = 1.500e-51 Identity = 99/229 (43.23%), Postives = 157/229 (68.56%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581 W+R++ + ++APIIQ IL A + A TE G++ + ++ D++ DA+ E+WETSQNP VY+LSS++D L ET + +A++EIRRA+P+F++E+W + E LP +A+L+G+ + LK + E Y +M R RK+EGL +DPHVL I N E+++A D Q P++++ Q INC+RNREG++VEG EDEV A +Y+ F R+YDE++ L+W+I + ++ Sbjct: 232 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMAVAIKEIRRAEPDFILEEWKENIEEVVLPGVLEAFLRGNSRDLKKWFGEAAYSRMNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 460
BLAST of NO17G01880 vs. NCBI_GenBank
Match: ETI33170.1 (hypothetical protein F443_20124 [Phytophthora parasitica P1569]) HSP 1 Score: 213.4 bits (542), Expect = 1.900e-51 Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581 W+R++ + ++APIIQ IL A + A TE G++ + ++ D++ DA+ E+WETSQNP VY+LSS++D L ET +G+A++EIRRA+P+F++E+W + E LP +A+L+G+ + LK + E Y ++ R RK+EGL +DPHVL I N E+++A D Q P++++ Q INC+RNREG++VEG EDEV A +Y+ F R+YDE++ L+W+I + ++ Sbjct: 257 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYCRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485
BLAST of NO17G01880 vs. NCBI_GenBank
Match: XP_008862349.1 (hypothetical protein H310_01104 [Aphanomyces invadans] >ETW08544.1 hypothetical protein H310_01104 [Aphanomyces invadans]) HSP 1 Score: 213.4 bits (542), Expect = 1.900e-51 Identity = 107/236 (45.34%), Postives = 153/236 (64.83%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTE----LGRQAGKLRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 588 WER+A +L++ PIIQ +L A + A TE LG A K R K+ D ED RE WETSQNP VY++SS++D L ET IA++EIRRADP F +E W + E+ +P A+L+G+ + LK ++ E Y + R RK++GL +DP++L I N ++ D Q P++ + + Q INC+RNREG+IVEG ED+++A+FY+ F REYDE+ AL+WKI E + S P+I Sbjct: 181 WERVASRLRETPIIQGLLDAANQAAKTEAGKVLGSTAKKARDKVGDATEDVREYWETSQNPWVYRMSSIYDGLFGETAESIAIKEIRRADPSFDVETWKDAVAENVVPHVLDAFLRGNSRDLKQWMGEAAYNTVNMAIRERKSDGLVVDPNILAIRNVTVIALSAEDKQAPIIGIQLMAQQINCIRNREGEIVEGAEDDIQANFYIFAFRREYDEEASALKWKIIEFGVIGSVPYI 416
BLAST of NO17G01880 vs. NCBI_GenBank
Match: XP_012196472.1 (hypothetical protein SPRG_02509 [Saprolegnia parasitica CBS 223.65] >KDO32816.1 hypothetical protein SPRG_02509 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 212.6 bits (540), Expect = 3.300e-51 Identity = 108/236 (45.76%), Postives = 151/236 (63.98%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGK----LRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 588 W+R+ +LK+ PIIQ +L+A A T+ G+ G + K+ D ED RE WETSQNP VY+LSS++D L ET IA+REIRRADP F +E+W + ES +P A+LKG+ + LK ++ E Y + R RK +GL +DP+VL I + ++ D Q PV+ L + Q I+C+RNREG+I+EG EDE++A+FY+ F REYDE E AL+WKI E + S P+I Sbjct: 171 WDRIGARLKETPIIQGLLEAARLAAKTKAGQTVGSGAKVAKDKIGDATEDVREYWETSQNPWVYRLSSIYDGLFGETAESIAIREIRRADPSFNVEEWKDNVAESVVPFVLDAFLKGNSRDLKKWMGEAAYSTVNMAIRERKTDGLVVDPNVLAIRDVTVIALSAEDKQAPVIGLQLMAQQIHCIRNREGEIIEGAEDEIKANFYVFAFRREYDEDEMALRWKIVEFGVIGSVPYI 406
BLAST of NO17G01880 vs. NCBI_GenBank
Match: XP_008609561.1 (hypothetical protein SDRG_05614 [Saprolegnia diclina VS20] >EQC36780.1 hypothetical protein SDRG_05614 [Saprolegnia diclina VS20]) HSP 1 Score: 211.5 bits (537), Expect = 7.300e-51 Identity = 107/236 (45.34%), Postives = 151/236 (63.98%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGK----LRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 588 W+R+ +LK+ PIIQ +L+A A T+ G+ G + K+ D ED RE WETSQNP VY+LSS++D L ET IA+REIRRADP F +E+W + E+ +P A+LKG+ + LK ++ E Y + R RK +GL +DP+VL I + ++ D Q PV+ L + Q I+C+RNREG+I+EG EDE++A+FY+ F REYDE E AL+WKI E + S P+I Sbjct: 183 WDRIGARLKETPIIQGLLEAARLAAKTKAGQTVGSGAKVAKDKIGDATEDVREYWETSQNPWVYRLSSIYDGLFGETAESIAIREIRRADPSFNVEEWKDNVAEAVVPFVLDAFLKGNSRDLKKWMGEAAYSTVNMAIRERKTDGLVVDPNVLAIRDVTVIALSAEDKQAPVIGLQLMAQQIHCIRNREGEIIEGAEDEIKANFYVFAFRREYDEDEMALRWKIVEFGVIGSVPYI 418
BLAST of NO17G01880 vs. NCBI_GenBank
Match: OQR99043.1 (Mitochondrial Protein Translocase (MPT) Family [Achlya hypogyna]) HSP 1 Score: 211.5 bits (537), Expect = 7.300e-51 Identity = 105/236 (44.49%), Postives = 154/236 (65.25%), Query Frame = 0 Query: 357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGK----LRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 588 W+R+ +LK+ PIIQ +L+A A T+ G+ G + K+ D ED RE WETSQNP VY+LSS++D L ET IA+REIRRADP F +E+W ++ ++ +P A+LKG+ + LK ++ E Y + R RK++GL +DP+VL I + ++ D Q PV+ + + Q I+C+RNREG+I+EG EDE++A+FY+ F REYDE+E AL+WKI E + S P+I Sbjct: 181 WDRIGARLKETPIIQGLLEAARLAAKTQAGQTVGSGAKAAKDKIGDATEDVREYWETSQNPWVYRLSSIYDGLFGETAESIAIREIRRADPSFNVEEWKDSVADTVVPFVLDAFLKGNSRDLKKWMGEAAYSTVNMAIRERKSDGLVVDPNVLAIRDVTVIALSAEDKQAPVIGIQLMAQQIHCIRNREGEIIEGAEDEIKANFYVFAFRREYDEEEMALRWKIVEFGVIGSVPYI 416 The following BLAST results are available for this feature:
BLAST of NO17G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01880 ID=NO17G01880|Name=NO17G01880|organism=Nannochloropsis oceanica|type=gene|length=2055bpback to top protein sequence of NO17G01880.1 >NO17G01880.1-protein ID=NO17G01880.1-protein|Name=NO17G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bpback to top Synonyms
Publications
|