NO17G01880, NO17G01880 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01880
Unique Name	NO17G01880
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2055
Alignment location	chr17:542373..544427 -

Link to JBrowse

Properties


Property Name	Value
Description	Membrane transporter, Tim44-related/Ribosomal protein L45

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:542373..544427 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032710	NTF2-like_dom_sf
IPR007379	Tim44-like_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Homology

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: EWM24233.1 (Membrane transporter, Tim44-related/Ribosomal protein L45 [Nannochloropsis gaditana])

HSP 1 Score: 484.6 bits (1246), Expect = 4.400e-133
Identity = 267/328 (81.40%), Postives = 285/328 (86.89%), Query Frame = 0

Query:  260 DSFYTRWLAGRPPREAARAWTQDFKVGLKEAFADLFGMQEKSTGMKKHIYQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTWERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQPVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 588
            ++ +TRWLAGRPPRE+ R + +DF+VGL+EAFADLFGM+EKSTGM+KHIYQ            XXXXXXXXXXXXXXXXXXXXX            TWERLAEQL+DAPIIQEILKAGTKLADTELGRQA             ARE+WETSQNP+VYKLSSMWDDLTSETELGIALREIRRADP+FV+EDWV TL+ESFLPLFFKAYLKGDLKTLKPYLSEGMY+QMAEEFRLRKAEGLALDPHVLEISNAEIVQAK+HDHQPVLVLGTLIQHINCVRNREG IVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI
Sbjct:  257 ENVFTRWLAGRPPRESVRVFVRDFQVGLREAFADLFGMREKSTGMRKHIYQQ--RASEADGEAXXXXXXXXXXXXXXXXXXXXXGGALVVVKQQQKTWERLAEQLRDAPIIQEILKAGTKLADTELGRQAXXXXXXXXXXXXXARELWETSQNPIVYKLSSMWDDLTSETELGIALREIRRADPDFVVEDWVNTLSESFLPLFFKAYLKGDLKTLKPYLSEGMYRQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKLHDHQPVLVLGTLIQHINCVRNREGAIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 582

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: CBJ27872.1 (Import inner membrane translocase subunit TIM44, mitochondrial precursor [Ectocarpus siliculosus])

HSP 1 Score: 228.4 bits (581), Expect = 5.700e-56
Identity = 106/221 (47.96%), Postives = 155/221 (70.14%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEI--VQAKIHDHQPVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKI 576
            WERL E+LK++PIIQ++L A   +A   LG+ A   +  + D+VED +E WETSQ+PLVYKLSS WD LT+E++ GI +RE+RR DP F +EDW   + E FLP F  A+L+GD+K LK +  E  Y ++A E + RKA+G+ LDPHVL+I   E+  ++A      P + L  + Q INCVRN++G+I+EG ED++RA++Y+L F RE+++ E  L+W++
Sbjct:  370 WERLQERLKESPIIQDLLGASRVVASGSLGQGAKSAKDTVKDKVEDVQEAWETSQHPLVYKLSSAWDSLTAESDEGIGVRELRRLDPSFSVEDWKRDIQELFLPEFMSAFLRGDVKLLKQWTGEACYNKLASEAKQRKADGMVLDPHVLDIRQGEVLAIKADAGKANPTIALQFMCQQINCVRNKKGEILEGAEDDIRATYYILAFQREFNDDEAELRWRV 590

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: CCA26040.1 (Mitochondrial Protein Translocase (MPT) Family puta [Albugo laibachii Nc14])

HSP 1 Score: 216.9 bits (551), Expect = 1.700e-52
Identity = 107/229 (46.72%), Postives = 151/229 (65.94%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAG----KLRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581
            W++++ + ++APIIQ IL A  K A TE GR  G    K R KL+D  E+  E WETSQNP +Y+LSS++D    ET +GIA+REIRRA+PEF++E W   + E  LP    A+LKG  + LK +  E  Y ++    R RK+EGL +DP+VLEI N ++++A   D Q P++++    Q INC+RNREG+IVEG EDEV A +Y+  F REYDE    L+W+I + ++
Sbjct:  174 WQKISARFREAPIIQSILDAAKKAARTEAGRNVGTKAKKAREKLDDAREEVLEFWETSQNPWIYRLSSLYDGFFGETSMGIAIREIRRAEPEFILEQWKEDIAEFVLPGVLDAFLKGRSRDLKKWFGEAAYNRINIAIRERKSEGLVMDPNVLEIDNVDVIEASAEDKQAPIILVRFRSQQINCIRNREGEIVEGAEDEVLAYYYIFAFQREYDESTERLRWRIVDVHM 402

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: OQR81857.1 (Mitochondrial Protein Translocase (MPT) Family [Thraustotheca clavata])

HSP 1 Score: 216.1 bits (549), Expect = 2.900e-52
Identity = 108/236 (45.76%), Postives = 155/236 (65.68%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGK----LRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI 588
            W+R+  +LK+ PIIQ +L+A    A+T+ G+  G      + KL D  EDARE WETSQNP VY+LSS++D L  ET   IA+REIRRADP F +E+W   + ++ +P    A+LKG+ + LK ++ E  Y  +    R RKA+GL +DP+VL I +  ++     D Q P++ +  + Q INC+RNREG+I+EG EDE++A+FY+  F REYDE+E AL+WKI E  +  S P+I
Sbjct:  187 WDRIGARLKETPIIQGLLEAARLAAETKAGQTLGSSAKVAKDKLGDTAEDAREYWETSQNPWVYRLSSIYDGLFGETAESIAIREIRRADPSFNVEEWKDQVADTVVPFVLDAFLKGNSRDLKKWMGEAAYNTVNMSIRERKADGLVVDPNVLAIRDVTVIALSAEDKQAPIIGIQLMAQQINCIRNREGEIIEGAEDEIKANFYVFAFRREYDEEEMALRWKIIEFGVIGSVPYI 422

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: ETK73484.1 (hypothetical protein L915_19587 [Phytophthora parasitica])

HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52
Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581
            W+R++ + ++APIIQ IL A  + A TE G++  +   ++ D++ DA+    E+WETSQNP VY+LSS++D L  ET +G+A++EIRRA+P+F++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG++VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  257 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: ETL26914.1 (hypothetical protein L916_19478 [Phytophthora parasitica] >ETP03001.1 hypothetical protein F441_20004 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52
Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581
            W+R++ + ++APIIQ IL A  + A TE G++  +   ++ D++ DA+    E+WETSQNP VY+LSS++D L  ET +G+A++EIRRA+P+F++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG++VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  257 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: ETL80161.1 (hypothetical protein L917_19318 [Phytophthora parasitica] >ETM33409.1 hypothetical protein L914_19353 [Phytophthora parasitica])

HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52
Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581
            W+R++ + ++APIIQ IL A  + A TE G++  +   ++ D++ DA+    E+WETSQNP VY+LSS++D L  ET +G+A++EIRRA+P+F++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG++VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  257 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: XP_008914210.1 (hypothetical protein PPTG_17989 [Phytophthora parasitica INRA-310] >ETN00539.1 hypothetical protein PPTG_17989 [Phytophthora parasitica INRA-310] >ETP31152.1 hypothetical protein F442_19953 [Phytophthora parasitica P10297])

HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52
Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581
            W+R++ + ++APIIQ IL A  + A TE G++  +   ++ D++ DA+    E+WETSQNP VY+LSS++D L  ET +G+A++EIRRA+P+F++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG++VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  257 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: ETO61906.1 (hypothetical protein F444_20138 [Phytophthora parasitica P1976])

HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52
Identity = 99/229 (43.23%), Postives = 158/229 (69.00%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRVEDAR----EMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581
            W+R++ + ++APIIQ IL A  + A TE G++  +   ++ D++ DA+    E+WETSQNP VY+LSS++D L  ET +G+A++EIRRA+P+F++E+W   + E  LP   +A+L+G+ + LK +  E  Y ++    R RK+EGL +DPHVL I N E+++A   D Q P++++    Q INC+RNREG++VEG EDEV A +Y+  F R+YDE++  L+W+I + ++
Sbjct:  257 WQRVSARFREAPIIQGILDAAKQAAKTEAGKKVQQTTKQVKDKISDAQEEVLEVWETSQNPWVYRLSSIYDGLFGETPMGVAIKEIRRAEPDFILEEWKENIEEIVLPGVLEAFLRGNSRDLKKWFGEAAYSRVNIAIRERKSEGLVMDPHVLSIDNVEVIEATAEDKQAPIILMRFQAQQINCIRNREGEVVEGSEDEVLAYYYIFAFQRDYDEEQETLRWRIVDLHM 485

[Close]

BLAST of NO17G01880 vs. NCBI_GenBank
Match: CCI48541.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 214.5 bits (545), Expect = 8.600e-52
Identity = 104/229 (45.41%), Postives = 151/229 (65.94%), Query Frame = 0

Query:  357 WERLAEQLKDAPIIQEILKAGTKLADTELGRQAG----KLRGKLNDRVEDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDWVGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLALDPHVLEISNAEIVQAKIHDHQ-PVLVLGTLIQHINCVRNREGKIVEGKEDEVRASFYLLLFVREYDEKEGALQWKIQERYL 581
            W++++ + ++APIIQ IL A  K A TE GR  G    K + KL+D  E+  E WETSQNP +Y+LSS++D    ET +GIA+REIRRA+P+F++E W   + E  LP    A+LKG  + LK +  E  Y ++    R RK+EGL +DP+VLEI N ++++A   D Q P++++    Q INC+RNREG+IVEG EDEV A +Y+  F R+YDE    L+W+I + ++
Sbjct:  176 WQKISARFREAPIIQSILDAAKKAARTEAGRNVGTKAKKAKEKLDDAREEVLEFWETSQNPWIYRLSSLYDGFFGETSMGIAIREIRRAEPDFILEQWKEDIAEFVLPGVLDAFLKGQSRNLKKWFGEAAYNRINIAIRERKSEGLVMDPNVLEIDNVDVIEASAEDKQAPIILVRFRSQQINCIRNREGEIVEGAEDEVLAYYYIFAFQRQYDESTERLRWRIVDVHM 404

The following BLAST results are available for this feature:

BLAST of NO17G01880 vs. NCBI_GenBank

BLAST of NO17G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24233.1	4.400e-133	81.40	Membrane transporter, Tim44-related/Ribosomal prot...	[more]
CBJ27872.1	5.700e-56	47.96	Import inner membrane translocase subunit TIM44, m...	[more]
CCA26040.1	1.700e-52	46.72	Mitochondrial Protein Translocase (MPT) Family put...	[more]
OQR81857.1	2.900e-52	45.76	Mitochondrial Protein Translocase (MPT) Family [Th...	[more]
ETK73484.1	8.600e-52	43.23	hypothetical protein L915_19587 [Phytophthora para...	[more]
ETL26914.1	8.600e-52	43.23	hypothetical protein L916_19478 [Phytophthora para...	[more]
ETL80161.1	8.600e-52	43.23	hypothetical protein L917_19318 [Phytophthora para...	[more]
XP_008914210.1	8.600e-52	43.23	hypothetical protein PPTG_17989 [Phytophthora para...	[more]
ETO61906.1	8.600e-52	43.23	hypothetical protein F444_20138 [Phytophthora para...	[more]
CCI48541.1	8.600e-52	45.41	unnamed protein product [Albugo candida]	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL156	nonsL156	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR035	ncniR035	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR028	ngnoR028	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002971	NSK002971	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO17G01880.1	NO17G01880.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|599724	gene_7703	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
TIM44	gene6247	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO17G01880.1	NO17G01880.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO17G01880 ID=NO17G01880|Name=NO17G01880|organism=Nannochloropsis oceanica|type=gene|length=2055bp
ACAGGAACTATAGAGCCTGGGGAACGCCGACGGTAGGGAGCCAGTGACTC
CAAGCAGCACAAGGCACCATCCGATCAAGAAGCTACACCTGAGGGGGTAA
TGCTGCGGCGGGGCGGAGCATTGTGGCGGGGGGCCCACTACCATTCAGgt
gtgtacgtatgtgaaacgagcaatgcggatacatgaggcagcgtttgtgc
aaccgtgttatgtgtttcacgttaacttaatccttttttgcatctgctca
gGCACCAGGGTACGGCAGCCAGCGCTGGTGGCCCTACTATTGCAGCAGCA
GGGTTTGACGCCACCAGCACCCGGCAGCATCAGCAACTTGTCGGGAGCGC
GGCGGGCCTTGGCGGGAGGCTTCTTTGATCAACTTAAAAAGTCATTCAAT
AAGGAGGTGGAGCAAAACAAGGAGTTCAAGGAGAGTCTGTCGAAGCTCCG
GAAGGAGACTGGGGACCTGACGGACAAGACGTTCAAGCTGACGGATAGCG
TGCAGAAGTACTCGTCTGCGTTTTCCACCCGCTTGAGCGAGACAACCGAA
ACGCTAAGCAAGAGCTCGCAGGCTGTCGTGTCTCAGCTCAAGGAGAAGAT
GGCGGCGGCGCAGCAGGGGCAAGAGAAGGAAAAAGAGGAAGAGGGAGGGG
ACGCAGGAGCCAGGGGTGCCGCTGCAGCTGCAAGGCCTACGGAGGAGAGT
AAGGCACCAAGTGTCGAGTCTACGGCAGAGACTGTGCGAGCAGAGGGAGA
TGTAGAATCACAACCACTGTCATCGGCCTCGACAAGCACCCAGAGGAGAA
GAGAAGAGAAGGTAGGAGATGAAGCAGGTGGAGAGGGAACAGTCAAGACC
TCCACTTCTGGAGCCCACAATGAAGAAAGCAAGGGAGGAGGAGTTGGAGA
GGAAGCCAAAGATGACTCCTCTTCCTCCTCTTCCACCAACGGCGGAAGCA
CCAGTAGCACGGCAGCCTCCGCAGATGGGGATAGTTTCTACACGCGCTGG
CTGGCAGGACGGCCACCCAGGGAGGCAGCTAGAGCCTGGACCCAAGACTT
TAAAGTGGGTTTGAAGGAGGCTTTCGCGGACTTATTTGGCATGCAAGAAA
AGAGCACCGGTATGAAGAAGCACATCTACCAGCATTCCTCCACGGACGCA
GCAGCAGCGGCCGCAGCCGCCGACAAAGTGGATGAAGAGAAGGATGACGA
GGCGGAGGAAGCCGAGAAGAAGGCAGTGGGGCGCGGTGCGCTTGTGGTGG
TTAAGCAGCAGCAGAAGACTTGGGAGCGACTGGCAGAACAATTGAAGGAC
GCACCGATCATTCAGGAAATCCTTAAGGCAGGGACTAAGCTGGCCGATAC
CGAGCTGGGTCGACAGGCAGGAAAGCTGAGGGGAAAGCTTAACGACAGGG
TAGAGGACGCTAGGGAGATGTGGGAGACGAGTCAAAACCCATTGGTGTAC
AAGTTGTCGTCGATGTGGGATGACTTGACCTCAGAAACCGAGCTGGGGAT
AGCGTTACGGGAGATCAGGCGGGCCGACCCAGAGTTTGTCATGGAGGATT
GGGTGGGTACGCTCACGGAGTCGTTTTTGCCTTTGTTTTTTAAGGCCTAC
CTGAAGGGAGATCTGAAGACGTTGAAGCCCTATCTGTCGGAGGGGATGTA
CAAGCAGATGGCGGAGGAGTTTAGGTTGAGGAAGGCGGAGGGGTTGGCAC
TTGACCCCCATGTGCTGGAGATAAGCAATGCCGAGATTGTTCAGGCGAAA
ATTCACGATCATCAACCTGTTCTGGTGCTTGGAACCTTGATTCAGCATAT
CAACTGTGTGCGAAACCGCGAGGGAAAAATTGTGGAGGGGAAGGAAGATG
AGGTCCGCGCGTCGTTTTACCTGCTGTTGTTTGTGCGGGAGTATGATGAG
AAGGAGGGGGCCCTGCAGTGGAAGATCCAGGAGCGATACCTTGGCTTCTC
CCAGCCCTTCATTTAGGGAGGACGATGGGTGGTTGGTAAGCTTAGATGTC
AAGAGCCAGAGTGGAGGGGAGCCGCAGAGGGTAAGACCGAAGCAAAAAGG
GCTGT

protein sequence of NO17G01880.1

>NO17G01880.1-protein ID=NO17G01880.1-protein|Name=NO17G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bp
MLRRGGALWRGAHYHSGTRVRQPALVALLLQQQGLTPPAPGSISNLSGAR
RALAGGFFDQLKKSFNKEVEQNKEFKESLSKLRKETGDLTDKTFKLTDSV
QKYSSAFSTRLSETTETLSKSSQAVVSQLKEKMAAAQQGQEKEKEEEGGD
AGARGAAAAARPTEESKAPSVESTAETVRAEGDVESQPLSSASTSTQRRR
EEKVGDEAGGEGTVKTSTSGAHNEESKGGGVGEEAKDDSSSSSSTNGGST
SSTAASADGDSFYTRWLAGRPPREAARAWTQDFKVGLKEAFADLFGMQEK
STGMKKHIYQHSSTDAAAAAAAADKVDEEKDDEAEEAEKKAVGRGALVVV
KQQQKTWERLAEQLKDAPIIQEILKAGTKLADTELGRQAGKLRGKLNDRV
EDAREMWETSQNPLVYKLSSMWDDLTSETELGIALREIRRADPEFVMEDW
VGTLTESFLPLFFKAYLKGDLKTLKPYLSEGMYKQMAEEFRLRKAEGLAL
DPHVLEISNAEIVQAKIHDHQPVLVLGTLIQHINCVRNREGKIVEGKEDE
VRASFYLLLFVREYDEKEGALQWKIQERYLGFSQPFI*

Synonyms

Publications