NO17G01870, NO17G01870 (gene) Nannochloropsis oceanica

Overview
NameNO17G01870
Unique NameNO17G01870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1522
Alignment locationchr17:540670..542191 +

Link to JBrowse

Properties
Property NameValue
DescriptionPlatelet-activating factor acetylhydrolase ib subunit alpha
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:540670..542191 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR037190LIS1_N
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR006594LisH
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Homology
BLAST of NO17G01870 vs. NCBI_GenBank
Match: EWM24244.1 (platelet-activating factor acetylhydrolase ib subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 456.8 bits (1174), Expect = 7.900e-125
Identity = 288/444 (64.86%), Postives = 330/444 (74.32%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARNLPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDAQXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDKCXXXXXXXXXXXXXXXXXXGKAGNSISGRAVRAYLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWECR 471
            MLTERQKADLHVAILEYLRD G  LA++AE FA E GLE A VPK TGTLEKKW+AVVRLQKK+MELEER+   EQELK  R H + + G R  AAG  RNLPRAPA+++ +GHRGGVTCL  HP+FALLVSGS+D+TIKTWDLESG +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +T P+C+RTLRGHDH ISGL F+GP+DAQXXXXXXXXXXXXXXVSTG+C R+L   HTDWVRC+A S                             REH+HVVE++AFPP G  VK+D                       AG    G A  AYLVSG RDKT+ LW+A TGQCL   +DH+NWVRSV FHPSGQ++LSVSDDRS+RVFDIA+ARC+R++ DAH QFV+AL QH  LPY+ATGSV+REIK+WECR
Sbjct:    1 MLTERQKADLHVAILEYLRDEGDSLAKTAELFALETGLEAAAVPKLTGTLEKKWSAVVRLQKKLMELEERMLVAEQELKAYRGHSH-MGGTRAPAAGDDRNLPRAPAIRSFLGHRGGVTCLAMHPIFALLVSGSDDATIKTWDLESGAHELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAPECVRTLRGHDHTISGLAFIGPTDAQXXXXXXXXXXXXXXVSTGFCQRSLVGAHTDWVRCIATSADGALLASGGSDRLVAVWALDTCAPVAVLREHSHVVEAVAFPPPGVAVKIDGN------KGGSTGLGSENGEASAGLQSQGSAEEAYLVSGSRDKTIMLWNARTGQCLLRLADHENWVRSVRFHPSGQFLLSVSDDRSLRVFDIAKARCIRSLPDAHEQFVSALAQHPTLPYLATGSVNREIKLWECR 437          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: GAY03951.1 (putative dynein regulator [Pythium insidiosum])

HSP 1 Score: 293.9 bits (751), Expect = 8.900e-76
Identity = 205/452 (45.35%), Postives = 264/452 (58.41%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGG---ARNLPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLG-PSDAQXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDKCXXXXXXXXXXXXXXXXXXGK-----AGNSISGRAVRAYLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            +LTE+Q+ DLH ++L+YL   G   A +A +F RE G+  +   K    LEKKWT+V+RLQKKVMELE ++   E+  K       G+V  R +  GG   A  LPRAP   +L GHR  +TC+  HPVF++ VSGSED+TIK WD E+G Y XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CL+TLRGHDHN+ GL F   P   +              +STGYCL T+  GH DWVR +  S+                            REH HVVES+ F   G + +  +K                   G      A +  S R ++ +L+SG RD+TV+LW+A +   L +FS H+NWVR V FHP G+Y +SV++DR++RV DI   RCVRT+  AH  F+T+L  H  LP + TG +D+ I VWEC
Sbjct:    2 VLTEKQRQDLHQSMLDYLVAMGDRFADTAAAFEREAGITQSHDGKHADMLEKKWTSVLRLQKKVMELESKIKQLEESNKLG-----GIVSRRDVLGGGRSRAEFLPRAPCKYSLSGHRNPITCVAFHPVFSVFVSGSEDATIKVWDFETGEYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDY-ECLKTLRGHDHNVCGLAFSPLPDSDRLYSCSRDHTIKVWEISTGYCLHTMNNGHADWVRDICVSDDGLYLASCGNDRSILFWDLQHHRVLQSLREHEHVVESVVFAKSGAQEQAIEKFHAQKLVTVSSPSSETALNGSGSTTDAAHVASPRKIK-FLLSGSRDRTVRLWEAFSATMLMSFSSHENWVRCVRFHPCGRYAVSVAEDRTIRVHDIETGRCVRTVDQAHEHFLTSLDIHASLPLMITGGIDKHINVWEC 446          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: XP_009514540.1 (hypothetical protein PHYSODRAFT_553886 [Phytophthora sojae] >EGZ27265.1 hypothetical protein PHYSODRAFT_553886 [Phytophthora sojae])

HSP 1 Score: 293.1 bits (749), Expect = 1.500e-75
Identity = 206/465 (44.30%), Postives = 271/465 (58.28%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARN--LPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDA--QXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDK----------CXXXXXXXXXXXXXXXXXXGKAGNSISGRAVRA--------YLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            +LT++Q+ DLH A+L+YL   G+  A SA +F +E  +  +   K  G LEKKWT+V+RLQ+KVMELE ++A  E+  K       GV+  R +     R+  LPRAPA  +L GHR  +TC+  HPVF++LVSGSED+++K WD E+G Y  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CLRTLRGHDHN+ G++F GP  A  +              +STGYC+ TL  GH+DWVR +A S+                            REH HVVES+ F   G + ++ ++                             G +    +G    A        +L+SG RD+TV+LW+A +G  L  F+ H+NWVR V FHPSG+Y LS  +D+S+RVFDI   RCVRT+ +AHS FVT L  H  LP + +G +D+ I VWEC
Sbjct:    2 VLTDKQRQDLHQAMLDYLVGMGERFADSAAAFEKEADVSKSSDGKHAGLLEKKWTSVIRLQRKVMELETKVAQLEENAKLG-----GVLSRRDVLGARQRSEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDASVKVWDFETGEYERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDY-ECLRTLRGHDHNVCGIVF-GPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHSDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGIQEQVIERAHSKKLSATGALITANGNASPESDDHDMTGSSAGEPTGAVTVASSSPRRMKFLLSGSRDRTVRLWEAFSGMQLMLFASHENWVREVRFHPSGKYALSAGEDKSIRVFDIETGRCVRTLDEAHSHFVTCLDVHPSLPLIISGGIDKIINVWEC 459          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: XP_024573286.1 (lissencephaly-1 homolog [Plasmopara halstedii] >CEG36917.1 lissencephaly-1 homolog [Plasmopara halstedii])

HSP 1 Score: 286.2 bits (731), Expect = 1.900e-73
Identity = 205/465 (44.09%), Postives = 270/465 (58.06%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARN--LPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDA--QXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLD-------------DKCXXXXXXXXXXXXXXXXXXGKAGNSISGRAV-----RAYLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            +LT++Q+ DLH A+L+YL   G+  A +A +F  E  +  +   K  G LEKKWT+V+RLQ+KVMELE +LA  E+  K       GV+  R +     R   LPRAPA  +L GHR  +TC   HP+F++LVSGSED+T+K WD E+G Y XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CLRTLRGHDHN+ G++F GP  A  +              +STGYC+ TL  GH+DWVR +A S                             REH HVVES+ F  +G E  ++                                  G+   +++  +V       +L+SG RD+TV+LW+A +G  L  F++H+NWVR V FHPSG+Y LS  +D+++RV+DI   RCVRT+ +AHS FVT L  H  LP + +G +D+ I VWEC
Sbjct:    2 VLTDKQRQDLHQAMLDYLVGMGERFAGTATAFENEADVTKSCDGKHAGLLEKKWTSVIRLQRKVMELETKLAQLEENAKLG-----GVLSRRDMLGARQRTEFLPRAPAKLSLTGHRSPITCACFHPIFSVLVSGSEDATVKVWDFETGEYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDY-ECLRTLRGHDHNVCGVVF-GPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHSDWVRDVAVSHDGLYLASCGNDRSILLWDLQHMRVLQSIREHEHVVESVVFAKLGQEHVIEKIHAKKLAAAGVFSPANGGTSPQSSSHAMSDSTAGEPTGAVAVSSVPTIRRMKFLLSGSRDRTVRLWEAFSGVQLMIFANHENWVREVRFHPSGKYALSAGEDKTIRVYDIESGRCVRTLDEAHSHFVTCLDVHPSLPLIVSGGIDKIINVWEC 459          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: CCA18839.1 (putative dynein regulator [Albugo laibachii Nc14])

HSP 1 Score: 285.8 bits (730), Expect = 2.400e-73
Identity = 214/458 (46.72%), Postives = 278/458 (60.70%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARN--LPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDAQXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPV-----GTEVKLDDK---CXXXXXXXXXXXXXXXXXXGKAGNSI---SGRAVR--AYLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            +LT++Q+ DLH +IL+YL   G+   +++ +F RE  +  +   K  G LEKKWT+V+RLQKKVMELE ++   E+  K       G V  R    G  R+  LPRAP    L GHR  +TC+  HPVF++LVSGSED+T+K WD E G Y  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +C+RTLRGHDHN+S +IF    + +              +STGYC +TL  GHTDW+R +A ++       XXXXXXXXXXX          REH HV+E + F        GTE  +  K                        A N +    G+A +   YL+SG RD+TV+LW+A++G  L  F+ H+NWVR V FHPSG+Y++S ++D+S+RVFDI   RCVRT+ DAH+ FVT L  H  LP + +G +D+ I VWEC
Sbjct:    2 VLTDKQQQDLHQSILDYLNGMGERFTETSAAFEREANIHRSADGKHAGLLEKKWTSVLRLQKKVMELEAKVHQMEEAAK------LGNVISRRDVVGPHRSACLPRAPRKFELSGHRSPITCVIFHPVFSVLVSGSEDATLKVWDFEMGEYERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGNY-ECIRTLRGHDHNVSCVIFDTIQNERIITCSRDQQIKLWDISTGYCTKTLVNGHTDWIRDIALTDDSQLLASXXXXXXXXXXXMQTFRPIQTIREHEHVIECITFSKTAVEHRGTEKAVSRKVAPAGLANSPAAMMILANSENRDTAENGVHLDHGKAPKKLRYLLSGSRDRTVRLWEALSGVLLMNFTQHENWVRMVRFHPSGKYVISAAEDKSVRVFDIETGRCVRTLLDAHTHFVTCLDIHPTLPLLISGGIDKVINVWEC 452          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: GAY03820.1 (putative dynein regulator [Pythium insidiosum])

HSP 1 Score: 284.6 bits (727), Expect = 5.400e-73
Identity = 202/452 (44.69%), Postives = 259/452 (57.30%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGG---ARNLPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLG-PSDAQXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDKCXXXXXXXXXXXXXXXXXXGK-----AGNSISGRAVRAYLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            +LTE+Q+ DLH ++L+YL   G   A +A +F RE G+  +   K    LEKKWT+V+RLQKKVME         +  K       G+V  R +  GG   A  LPRAP   +L GHR  +TC+  HPVF++ VSGSED+TIK WD E+G Y XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CL+TLRGHDHN+ GL F   P   +              +STGYCL T+  GH DWVR +  S+                            REH HVVES+ F   G + +  +K                   G      A +  S R ++ +L+SG RD+TV+LW+A +   L +FS H+NWVR V FHP G+Y +SV++DR++RV DI   RCVRT+  AH  F+T+L  H  LP + TG +D+ I VWEC
Sbjct:    2 VLTEKQRQDLHQSMLDYLVAMGDRFADTAAAFEREAGITQSHDGKHADMLEKKWTSVLRLQKKVMEXXXXXXXXXESSKLG-----GIVSRRDVLGGGRSRAEFLPRAPCKYSLSGHRNPITCVAFHPVFSVFVSGSEDATIKVWDFETGEYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDY-ECLKTLRGHDHNVCGLAFSPLPDSDRLYSCSRDHTIKVWEISTGYCLHTMNNGHADWVRDICVSDDGLYLASCGNDRSILFWDLQHHRVLQSLREHEHVVESVVFAKSGAQEQAIEKFHAQKLVTVSSPSSETALNGSGSTTDAAHVASPRKIK-FLLSGSRDRTVRLWEAFSATMLMSFSSHENWVRCVRFHPCGRYAVSVAEDRTIRVHDIETGRCVRTVDQAHEHFLTSLDIHASLPLMITGGIDKHINVWEC 446          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: ETI50954.1 (hypothetical protein F443_05584 [Phytophthora parasitica P1569] >ETK90850.1 hypothetical protein L915_05449 [Phytophthora parasitica] >ETL44261.1 hypothetical protein L916_05395 [Phytophthora parasitica] >ETM50585.1 hypothetical protein L914_05401 [Phytophthora parasitica] >ETP20721.1 hypothetical protein F441_05598 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 274.2 bits (700), Expect = 7.300e-70
Identity = 201/465 (43.23%), Postives = 261/465 (56.13%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARN--LPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDA--QXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDKCXXXXXXXXXXXXXXXXXXGKAGN-----SISGRAVRA-------------YLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            +LT++Q+ DLH A+L+YL   G+  A +A +F +E  +  +   K  G LEKKWT+V+RLQ+KVMELE ++   E+  K       GV+  R +     R   LPRAPA  +L GHR  +TC+  HPVF++LVSGSED+++K WD E+G Y  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CLRTLRGHDHN+ G++F GP  A  +              +STGYC+ TL  GHTDWVR +A S+                            REH HVVES+ F   G E  ++                      +A N     S +G    A             +L+SG RD+TV+LW+A +G  L  F+ H+NWVR V FHPSG+Y LS  +D+++RVFD+   RCVRT+ +AHS FVT L               + I VWEC
Sbjct:    2 VLTDKQRQDLHQAMLDYLVGMGERFADTAAAFEKEADVTKSSDGKHAGLLEKKWTSVIRLQRKVMELESKMVQLEENAKLG-----GVLSRRDVLGARQRTEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDASVKVWDFETGEYERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDY-ECLRTLRGHDHNVCGIVF-GPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHTDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGQEQVIEKIHSKKLAATGALTPANGVASPEANNHDMTDSTAGEPTGAVAVASVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMLFASHENWVREVRFHPSGKYALSAGEDKTIRVFDVDTGRCVRTLDEAHSHFVTCLDVXXXXXXXXXXXXXKIINVWEC 459          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: XP_008903076.1 (hypothetical protein PPTG_10198 [Phytophthora parasitica INRA-310] >ETL97428.1 hypothetical protein L917_05284 [Phytophthora parasitica] >ETN11259.1 hypothetical protein PPTG_10198 [Phytophthora parasitica INRA-310] >ETO79708.1 hypothetical protein F444_05635 [Phytophthora parasitica P1976] >ETP48664.1 hypothetical protein F442_05630 [Phytophthora parasitica P10297])

HSP 1 Score: 273.9 bits (699), Expect = 9.500e-70
Identity = 201/465 (43.23%), Postives = 261/465 (56.13%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARN--LPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDA--QXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDKCXXXXXXXXXXXXXXXXXXGKAGN-----SISGRAVRA-------------YLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            +LT++Q+ DLH A+L+YL   G+  A +A +F +E  +  +   K  G LEKKWT+V+RLQ+KVMELE ++   E+  K       GV+  R +     R   LPRAPA  +L GHR  +TC+  HPVF++LVSGSED+++K WD E+G Y  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CLRTLRGHDHN+ G++F GP  A  +              +STGYC+ TL  GHTDWVR +A S+                            REH HVVES+ F   G E  ++                      +A N     S +G    A             +L+SG RD+TV+LW+A +G  L  F+ H+NWVR V FHPSG+Y LS  +D+++RVFD+   RCVRT+ +AHS FVT L               + I VWEC
Sbjct:    2 VLTDKQRQDLHQAMLDYLVGMGERFADTAAAFEKEADVTKSSDGKHAGLLEKKWTSVIRLQRKVMELETKMVQLEENAKLG-----GVLSRRDVLGARQRTEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDASVKVWDFETGEYERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDY-ECLRTLRGHDHNVCGIVF-GPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHTDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGQEQVIEKIHSKKLAATGALTPANGVASPEANNHDMTDSTAGEPTGAVAVASVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMLFASHENWVREVRFHPSGKYALSAGEDKTIRVFDVDTGRCVRTLDEAHSHFVTCLDVXXXXXXXXXXXXXKIINVWEC 459          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: OWZ11474.1 (Dynein light chain [Phytophthora megakarya])

HSP 1 Score: 255.8 bits (652), Expect = 2.700e-64
Identity = 189/434 (43.55%), Postives = 248/434 (57.14%), Query Frame = 0
Query:   27 MLTERQKADLHVAILEYLRDGGKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARN--LPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDA--QXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDKCXXXXXXXXXXXXXXXXXXGKAGN------SISGRAVRA-------------YLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIAD 438
            +LT++Q+ DLH A+L+YL   G+  A +A  F +E  +  +   K  G LEKKWT+V+RLQ+KVMELE ++A  E+ +K       GV+  R +     R   LPRAPA  +L GHR  +TC+  HPVF++LVSGSED+T+K WD E+G Y  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CLRTLRGHDHN+ G++F GP  A  +              +STGYC+ TL  GHTDWVR +  S+                            REH HVVES+ F   GT+ ++ +K                       N      S +G    A             +L+SG RD+TV+LW+  +G  L  F+ H+NWVR + FHPSG++ LS  +D+++RVFDI   RCVRT+ D
Sbjct:    2 VLTDKQRQDLHQAMLDYLVGMGERFADTAAVFEKEADVTKSSDGKHAGLLEKKWTSVIRLQRKVMELETKVAQLEENVKLG-----GVLSRRDVLGARQRTEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDATVKVWDFETGEYERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDY-ECLRTLRGHDHNVCGIVF-GPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHTDWVRDVTVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKSGTQEQVIEKAHAKKLAGTGVLTPVNERSSSESNNHNMTGSTAGEPTGAVAVATAPTIRRVKFLLSGSRDRTVRLWEGFSGMQLMLFASHENWVREIRFHPSGKFALSAGEDKTIRVFDIETGRCVRTLDD 428          
BLAST of NO17G01870 vs. NCBI_GenBank
Match: KUF64350.1 (Lissencephaly-1 [Phytophthora nicotianae])

HSP 1 Score: 253.4 bits (646), Expect = 1.300e-63
Identity = 191/444 (43.02%), Postives = 244/444 (54.95%), Query Frame = 0
Query:   48 GKGLAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANTEQELKTSRFHPYGVVGVRPLAAGGARN--LPRAPAVQTLVGHRGGVTCLTTHPVFALLVSGSEDSTIKTWDLESGVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSATVPDCLRTLRGHDHNISGLIFLGPSDA--QXXXXXXXXXXXXXXVSTGYCLRTLTEGHTDWVRCLAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXREHTHVVESLAFPPVGTEVKLDDKCXXXXXXXXXXXXXXXXXXGKAGN-----SISGRAVRA-------------YLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWVRSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHVVLPYVATGSVDREIKVWEC 470
            G+  A +A +F +E  +  +   K  G LEKKWT+V+RLQ+KVMELE ++   E+  K       GV+  R +     R   LPRAPA  +L GHR  +TC+  HPVF++LVSGSED+++K WD E+G Y  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +CLRTLRGHDHN+ G++F GP  A  +              +STGYC  TL  GHTDWVR +A S+                            REH HVVES+ F   G E  ++                      +A N     S +G    A             +L+SG RD+TV+LW+A +G  L  F+ H+NWVR V FHPSG+Y LS  +D+++RVFD+   RCVRT+ +AHS FVT L               + I VWEC
Sbjct:    2 GERFADTAAAFEKEADVTKSSDGKHAGLLEKKWTSVIRLQRKVMELETKMVQLEENAKLG-----GVLSRRDVLGARQRTEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDASVKVWDFETGEYERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDY-ECLRTLRGHDHNVCGIVF-GPDLASDRLYSCSRDNTIKVWELSTGYCXNTLNAGHTDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGQEQVIEKIHSKKLAATGALTPANGVASPEANNHDMTDSTAGEPTGAVAVASVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMLFASHENWVREVRFHPSGKYALSAGEDKTIRVFDVDTGRCVRTLDEAHSHFVTCLDVXXXXXXXXXXXXXKIINVWEC 438          
The following BLAST results are available for this feature:
BLAST of NO17G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24244.17.900e-12564.86platelet-activating factor acetylhydrolase ib subu... [more]
GAY03951.18.900e-7645.35putative dynein regulator [Pythium insidiosum][more]
XP_009514540.11.500e-7544.30hypothetical protein PHYSODRAFT_553886 [Phytophtho... [more]
XP_024573286.11.900e-7344.09lissencephaly-1 homolog [Plasmopara halstedii] >CE... [more]
CCA18839.12.400e-7346.72putative dynein regulator [Albugo laibachii Nc14][more]
GAY03820.15.400e-7344.69putative dynein regulator [Pythium insidiosum][more]
ETI50954.17.300e-7043.23hypothetical protein F443_05584 [Phytophthora para... [more]
XP_008903076.19.500e-7043.23hypothetical protein PPTG_10198 [Phytophthora para... [more]
OWZ11474.12.700e-6443.55Dynein light chain [Phytophthora megakarya][more]
KUF64350.11.300e-6343.02Lissencephaly-1 [Phytophthora nicotianae][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002970NSK002970Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01870.1NO17G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|623860gene_7704Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100020g13gene6246Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01870.1NO17G01870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01870 ID=NO17G01870|Name=NO17G01870|organism=Nannochloropsis oceanica|type=gene|length=1522bp
ATGTTTCCGATCACTGAGACACTGAACAAACGCACAGCCACCAAAGTGCG
GAGCCCAGACAGCGCCATACGTGTGCCCATGCTGACGGAGCGACAAAAGG
CGGACCTgtaagtacatcttgtatctgctttccccccatatcctcaacca
ccatcgccattgcctcccccatccaacacgcaccctccacacctccactc
cacaacccaaacaaagGCATGTGGCCATCCTGGAGTACCTGCGCGACGGC
GGGAAAGGCCTAGCACAGTCCGCAGAGTCCTTTGCCCGGGAAGTTGGCCT
GGAAACGGCCGACGTCCCTAAGTCCACAGGTACCCTGGAAAAGAAATGGA
CCGCAGTGGTGCGCCTGCAAAAAAAAGTCATGGAGCTCGAAGAGCGCCTT
GCAAACACCGAGCAAGAGCTCAAGACCTCGCGGTTTCATCCTTATGGTGT
GGTGGGTGTGCGGCCGCTGGCTGCCGGCGGGGCTCGCAACCTGCCTCGTG
CCCCGGCAGTGCAGACGCTTGTGGGCCATCGTGGCGGCGTGACATGTCTG
ACGACGCACCCCGTCTTTGCCCTACTCGTCTCCGGGAGCGAAGATTCTAC
GATTAAAACCTGGGATTTGGAGAGCGGGGTGTATGAAAAGACATTGAAAG
GGCACACGAATGGATTGCAATCCCTGGTGTTTAACCGAGCAGGCACCCTC
TTAGCTTCTTGCTCCAGCGACCTTAGCATCAAGATTTGGGATTTCGGTCC
CTCAGCGACCGTGCCTGACTGCCTTCGAACGCTCCGAGGCCACGACCATA
ACATCTCTGGCTTGATTTTTTTAGGGCCATCGGACGCGCAGCTTGTGTCG
TGCTCCCGGGACACGACTGTGAAGATATGGGAGGTTAGCACAGGGTATTG
CTTGCGGACATTGACGGAAGGACACACGGACTGGGTGCGTTGCTTGGCTG
CAAGTGAGGATGGCGCTCTTGTGGCGAGTGGAGGAAATGATCAGACAATT
GTGGTGTGGAATTTGTCGACGGGCTCACCGACCTTGACGCTACGGGAGCA
CACGCACGTGGTGGAGAGTTTGGCGTTTCCGCCCGTCGGGACGGAGGTGA
AGTTGGACGACAAATGCAGCAGCAGCAGTAGTAGCAGCAGCAGCAGCACC
ACCACCAATACTACTACCATTGGGAAAGCGGGTAATAGTATCAGCGGCCG
AGCTGTGCGTGCTTATTTGGTGTCGGGTGGGCGGGATAAGACTGTCAAGC
TATGGGACGCCGTGACGGGCCAATGTCTCTCGACCTTTTCTGACCACGAT
AACTGGGTACGTTCCGTCTGTTTCCACCCCTCTGGACAATATATCTTGAG
CGTTTCGGATGACAGAAGCATGCGTGTTTTTGATATTGCCAGGGCACGGT
GTGTCCGCACAATAGCGGACGCACACAGTCAGTTTGTGACTGCGCTGACA
CAGCACGTGGTCTTGCCCTATGTGGCGACAGGGAGCGTAGATAGAGAGAT
AAAGGTGTGGGAGTGCCGGTAG
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protein sequence of NO17G01870.1

>NO17G01870.1-protein ID=NO17G01870.1-protein|Name=NO17G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=471bp
MFPITETLNKRTATKVRSPDSAIRVPMLTERQKADLHVAILEYLRDGGKG
LAQSAESFAREVGLETADVPKSTGTLEKKWTAVVRLQKKVMELEERLANT
EQELKTSRFHPYGVVGVRPLAAGGARNLPRAPAVQTLVGHRGGVTCLTTH
PVFALLVSGSEDSTIKTWDLESGVYEKTLKGHTNGLQSLVFNRAGTLLAS
CSSDLSIKIWDFGPSATVPDCLRTLRGHDHNISGLIFLGPSDAQLVSCSR
DTTVKIWEVSTGYCLRTLTEGHTDWVRCLAASEDGALVASGGNDQTIVVW
NLSTGSPTLTLREHTHVVESLAFPPVGTEVKLDDKCSSSSSSSSSSTTTN
TTTIGKAGNSISGRAVRAYLVSGGRDKTVKLWDAVTGQCLSTFSDHDNWV
RSVCFHPSGQYILSVSDDRSMRVFDIARARCVRTIADAHSQFVTALTQHV
VLPYVATGSVDREIKVWECR*
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Synonyms
Publications