NO17G01840, NO17G01840 (gene) Nannochloropsis oceanica

Overview
NameNO17G01840
Unique NameNO17G01840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2121
Alignment locationchr17:528441..530561 +

Link to JBrowse

Properties
Property NameValue
Descriptionglutamate:glyoxylate aminotransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:528441..530561 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR004839Aminotransferase_I/II
Homology
BLAST of NO17G01840 vs. NCBI_GenBank
Match: EWM24220.1 (alanine-2-oxoglutarate aminotransferase 2 [Nannochloropsis gaditana])

HSP 1 Score: 901.4 bits (2328), Expect = 1.300e-258
Identity = 433/484 (89.46%), Postives = 465/484 (96.07%), Query Frame = 0
Query:    3 SSQPRVLNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTSVSTR 487
            ++QPRVLNYD LP+HVK CEYAVRGELYRAAT RVAAGKEVIFTNVGNPHGLGQKP+TFIRQVFALVSAPFLL+HPDV R+FPRD IARAKAY+KAAPGGIGAYSDSKGLPIVRQEFADFL RRDGFG++ID IFLTNGASE VRLGLTA+LRGPQDGILVPIPQYPLYSAAI+LL+GSMVGYYL EESGWSLDF+ELERAVRDAKRQGV+VRGMVFINPGNPTGQCLSR+DLEGL+KFA+KHKLVLMADEVYQDNIYQ+VRPF+SARHVALSMG+P+A  +E+ATFHTASKGVYGECGFRGGVMELLNFD+RV+DELYKLASINLSPNVPGQV+LGLM+NGPRPGDESYAQYAREKQ+LLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLP  AMAAAKAAGK+PDVFYCLKLLE TGISTVPGSGFKQRDGTFHFRTTILPPES+FQ IIQRFLAFHSAFMAEYKGS+G    +R
Sbjct:   46 AAQPRVLNYDSLPDHVKHCEYAVRGELYRAATERVAAGKEVIFTNVGNPHGLGQKPITFIRQVFALVSAPFLLEHPDVHRIFPRDVIARAKAYMKAAPGGIGAYSDSKGLPIVRQEFADFLQRRDGFGSDIDKIFLTNGASEAVRLGLTAMLRGPQDGILVPIPQYPLYSAAIELLSGSMVGYYLHEESGWSLDFEELERAVRDAKRQGVRVRGMVFINPGNPTGQCLSRQDLEGLVKFAYKHKLVLMADEVYQDNIYQTVRPFVSARHVALSMGSPYAQGLELATFHTASKGVYGECGFRGGVMELLNFDERVADELYKLASINLSPNVPGQVILGLMVNGPRPGDESYAQYAREKQDLLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPPAAMAAAKAAGKSPDVFYCLKLLETTGISTVPGSGFKQRDGTFHFRTTILPPESKFQDIIQRFLAFHSAFMAEYKGSTGRGTDSR 529          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: CBJ25743.1 (nicotinanamine aminotransferase A [Ectocarpus siliculosus])

HSP 1 Score: 645.2 bits (1663), Expect = 1.600e-181
Identity = 312/490 (63.67%), Postives = 375/490 (76.53%), Query Frame = 0
Query:    1 MASSQPRVLNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTSVST-RARL 490
            MA+S  +VL YD + E VK C+YAVRGE+Y AAT R+ AGKEVIFTNVGNPHGLGQKPLTF+RQV ALV APFLL+ P V  +FP DAIARA+ YL    GG GAYSDSKG P VRQE  DF+ RRDG   + DNIFLTNGASE VRL L   +RGP DG++VP+PQYPLYSA++ L +G+ VGY L E  GW LD   L  A+ +A+R G+ +R +VFINPGNPTG CL+ +DL  L++FA+ ++LVLMADEVYQ+NIYQS  PF S + V   MG P+++ VE+ +FHT SKGVYGECG RGG MEL N DQRVSDE+YKL SINLSPNV GQV +G+M N P+PG ESYA + REK+ LL SL RRAR+I DAFN  +G+ C+ETEGA+Y+FPKI LP  A+ AAKAAGKAPDVFYCL+LL++TG+S VPGSGF Q +GT+HFRTTILP E  FQS++  F +FH  FMA+Y        ST RARL
Sbjct:    1 MAASGGKVLTYDTIAECVKDCQYAVRGEIYLAATERIKAGKEVIFTNVGNPHGLGQKPLTFLRQVMALVMAPFLLEDPRVSDMFPGDAIARAREYLVHVKGGFGAYSDSKGNPYVRQEVCDFIERRDGHRTSPDNIFLTNGASEAVRLVLRTAIRGPSDGVMVPVPQYPLYSASVALYSGTFVGYNLCEAKGWGLDTASLNNALNEARRNGITLRALVFINPGNPTGNCLTVEDLRQLVRFAYDNRLVLMADEVYQENIYQSKTPFTSCKKVLAEMGYPYSSSVELVSFHTVSKGVYGECGLRGGYMELTNIDQRVSDEMYKLCSINLSPNVTGQVAMGIMCNPPKPGSESYALHMREKEVLLQSLIRRARSIVDAFNGLDGVTCEETEGALYAFPKIDLPRAAIDAAKAAGKAPDVFYCLELLKETGLSCVPGSGFGQAEGTYHFRTTILPAEDTFQSVVDGFTSFHRGFMAKYGXXXXXXHSTWRARL 490          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: XP_018436204.1 (PREDICTED: glutamate--glyoxylate aminotransferase 1-like [Raphanus sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 4.200e-169
Identity = 287/474 (60.55%), Postives = 357/474 (75.32%), Query Frame = 0
Query:    9 LNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTS 483
            L Y+ L E+VK+C+YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLDHP+V  LFP DAIARAK YL    GG+GAYSDS+GLP VR+E A+F+ RRDG+ ++ + IFLT+GAS+GV   L  ++RG +DGILVP+PQYPLYSA I LL GS+V YYL E   W LD + L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L  +++F +  KLVL+ DEVYQ NIYQ  RPFIS++ V + MG+PF+ +V++ +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLM++ P+PGD SY Q+ARE + +L+SLRRRAR +TD FNSC+ +VC  TEGAMYSFP+I LP GA+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +   I+  F  F+  FM +Y+ S G S
Sbjct:    3 LEYESLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDHPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGERDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLREILRFCYSEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRARIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMTQYENSFGYS 476          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: XP_013605461.1 (PREDICTED: glutamate--glyoxylate aminotransferase 1 [Brassica oleracea var. oleracea] >XP_013711295.1 glutamate--glyoxylate aminotransferase 1 [Brassica napus])

HSP 1 Score: 603.6 bits (1555), Expect = 5.500e-169
Identity = 288/474 (60.76%), Postives = 357/474 (75.32%), Query Frame = 0
Query:    9 LNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTS 483
            L YD+L E+VK+C+YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLD P+V  LFP DAIARAK YL    GG+GAYSDS+GLP VR+E A+F+ RRDG+ ++ + IFLT+GAS+GV   L  ++RG  DGILVP+PQYPLYSA I LL GS+V YYL E   W LD + L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L+ ++KF +  KLVL+ DEVYQ NIYQ  RPFIS++ V + MG+PF+  V++ +FHT SKG +GECG RGG  E+ NF  RV +E+YK+ASI LSPNV  Q+ +GLM++ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LP GA+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +   I+  F  F+  FMA+Y+   G S
Sbjct:    3 LEYDLLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGEGDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLKEILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNFPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMAQYENGFGYS 476          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: XP_009115544.1 (PREDICTED: glutamate--glyoxylate aminotransferase 1-like [Brassica rapa] >XP_013738229.1 glutamate--glyoxylate aminotransferase 1 [Brassica napus] >CDY44130.1 BnaA09g31220D [Brassica napus])

HSP 1 Score: 603.2 bits (1554), Expect = 7.100e-169
Identity = 286/474 (60.34%), Postives = 357/474 (75.32%), Query Frame = 0
Query:    9 LNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTS 483
            L Y+ L E+VK+C+YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLD P+V  +FP DAIARAK YL    GG+GAYSDS+GLP VR+E A+F+ RRDG+ ++ + IFLT+GAS+GV   L  ++RG +DGILVP+PQYPLYSA I LL GS+V YYL E   W LD + L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L  +++F H  KLVL+ DEVYQ NIYQ  RPFIS++ V + MG+PF+ +V++ +FHT SKG +GECG RGG  E+ NF  RV +E+YK+ASI LSPNV  Q+ +GLM++ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LP GA+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +   I+  F  F+  FM +Y+ S G S
Sbjct:    3 LEYESLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMIFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGERDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLREILRFCHSEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNFPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIKLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMTQYENSFGYS 476          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: XP_009110107.1 (PREDICTED: glutamate--glyoxylate aminotransferase 1 [Brassica rapa])

HSP 1 Score: 602.8 bits (1553), Expect = 9.300e-169
Identity = 288/474 (60.76%), Postives = 357/474 (75.32%), Query Frame = 0
Query:    9 LNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTS 483
            L YD+L E+VK+C+YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLD P+V  LFP DAIARAK YL    GG+GAYSDS+GLP VR+E A+F+ RRDG+ ++ + IFLT+GAS+GV   L  ++RG  DGILVP+PQYPLYSA I LL GS+V YYL E   W LD + L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L+ ++KF +  KLVL+ DEVYQ NIYQ  RPFIS++ V + MG+PF+  V++ +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLM++ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LP GA+ AAK AGKAPDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +   I+  F  F+  FMA+Y+   G S
Sbjct:    3 LEYDLLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGEGDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLKEILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKAPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMAQYENGFGYS 476          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: AAL24255.1 (At1g23310/F26F24_4 [Arabidopsis thaliana] >AAO11559.1 At1g23310/F26F24_4 [Arabidopsis thaliana])

HSP 1 Score: 601.7 bits (1550), Expect = 2.100e-168
Identity = 287/476 (60.29%), Postives = 355/476 (74.58%), Query Frame = 0
Query:    7 RVLNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTS 483
            + L+YD L E+VK+C+YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLD P+V  LFP DAIARAK YL    GG+GAYSDS+GLP VR+E A+F+ RRDG+ +N + IFLT+GAS+GV   L  ++RG  DGILVP+PQYPLYSA I LL G++V YYL E   W LD   L ++V  A+ QG+ VR MV INPGNPTGQCLS  ++  ++KF +  KLVL+ DEVYQ NIYQ  RPFIS++ V + MG+PF+ +V++ +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLM+N P+PGD SY Q+ARE + +L+SLRRRAR +TD FNSC+ +VC  TEGAMYSFP+I LP GA+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +   I+  F  F+  FM +Y  + G S
Sbjct:    4 KALDYDTLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSNPELIFLTDGASKGVMQILNCVIRGNGDGILVPVPQYPLYSATISLLGGTLVPYYLDESENWGLDVANLRQSVAQARSQGITVRAMVIINPGNPTGQCLSEANIREILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMEMGSPFSKEVQLVSFHTVSKGYWGECGQRGGYFEMTNLPPRVVEEIYKVASIALSPNVSAQIFMGLMVNPPKPGDISYDQFARESKGILESLRRRARLMTDGFNSCKNVVCNFTEGAMYSFPQIRLPTGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEDEMPEIMDSFKKFNDEFMTQYDNNFGYS 479          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: PAN09220.1 (hypothetical protein PAHAL_B00051 [Panicum hallii])

HSP 1 Score: 601.7 bits (1550), Expect = 2.100e-168
Identity = 285/471 (60.51%), Postives = 357/471 (75.80%), Query Frame = 0
Query:    9 LNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSS 480
            L+YD L E+VK+ +YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLD P+V  +FP DAIARAK YL  APGG+GAYSDS+G+P +R+E ADF+ RRDG+ ++ + I+LT+GAS+GV   L A++R  +DGILVP+PQYPLYSAAI L  GS+V YYL EE+ W LDF  + + V +A+ +G+ VR MV INPGNPTGQCLS  +++ L++F +   L L+ADEVYQ NIYQ  RPFISAR V   MG P + +V++ +FHT SKG +GECG RGG  E+ N   +  DE+YK+ASI LSPNVPGQ+ +G+M+N P+PGD SY ++A E + +L+S+RRRAR +TD FNSC  IVC  TEGAMYSFP+I LP  A+ AAK AGKAPDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E  F +II  F  F+ +FM +Y+G S
Sbjct:    6 LDYDQLNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLMFPADAIARAKHYLSLAPGGLGAYSDSRGIPGIRKEVADFIQRRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERDGILVPVPQYPLYSAAISLFGGSLVPYYLEEEANWGLDFVNIRQTVAEARSKGITVRAMVIINPGNPTGQCLSEANIKELLQFCYHENLALLADEVYQQNIYQDERPFISARKVLFDMGPPLSREVQLVSFHTVSKGFWGECGQRGGYFEMTNLPPKTVDEIYKVASIALSPNVPGQIFMGVMVNPPKPGDISYLKFAAESKSILESMRRRARMMTDGFNSCRNIVCNFTEGAMYSFPQIRLPPRAIEAAKRAGKAPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDFPAIISSFKKFNDSFMDQYEGYS 476          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: PUZ68197.1 (hypothetical protein GQ55_2G005900 [Panicum hallii var. hallii])

HSP 1 Score: 600.9 bits (1548), Expect = 3.500e-168
Identity = 284/471 (60.30%), Postives = 357/471 (75.80%), Query Frame = 0
Query:    9 LNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSS 480
            L+YD L E+VK+ +YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLD P+V  +FP DAIARAK YL  APGG+GAYSDS+G+P +R+E ADF+ RRDG+ ++ + I+LT+GAS+GV   L A++R  +DGILVP+PQYPLYSAAI L  GS+V YYL EE+ W LDF  + + V +A+ +G+ VR MV INPGNPTGQCLS  +++ L++F +   L L+ADEVYQ NIYQ  RPFISAR V   MG P + +V++ +FHT SKG +GECG RGG  E+ N   +  DE+YK+ASI LSPNVPGQ+ +G+M+N P+PGD SY ++A E + +L+S+RRRAR +TD FNSC  I+C  TEGAMYSFP+I LP  A+ AAK AGKAPDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E  F +II  F  F+ +FM +Y+G S
Sbjct:    6 LDYDQLNENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLMFPEDAIARAKHYLSLAPGGLGAYSDSRGIPGIRKEVADFIQRRDGYPSDPELIYLTDGASKGVMQMLNAIIRNERDGILVPVPQYPLYSAAISLFGGSLVPYYLEEEANWGLDFVNIRQTVAEARSKGITVRAMVIINPGNPTGQCLSEANIKELLQFCYHENLALLADEVYQQNIYQDERPFISARKVLFDMGPPLSREVQLVSFHTVSKGFWGECGQRGGYFEMTNLPPKTVDEIYKVASIALSPNVPGQIFMGVMVNPPKPGDISYLKFAAESKSILESMRRRARMMTDGFNSCRNIMCNFTEGAMYSFPQIRLPPRAIEAAKRAGKAPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDFPAIISSFKKFNDSFMDQYEGYS 476          
BLAST of NO17G01840 vs. NCBI_GenBank
Match: XP_013730520.1 (glutamate--glyoxylate aminotransferase 1 [Brassica napus] >CDY41452.1 BnaA08g20540D [Brassica napus])

HSP 1 Score: 600.5 bits (1547), Expect = 4.600e-168
Identity = 287/474 (60.55%), Postives = 355/474 (74.89%), Query Frame = 0
Query:    9 LNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGNPHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAPGGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGLTALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDELERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLMADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGECGFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDESYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITLPAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTILPPESQFQSIIQRFLAFHSAFMAEYKGSSGTS 483
            L YD+L E+VK+C+YAVRGELY  A+     GK++IFTNVGNPH LGQKPLTF RQV AL  APFLLD P+V  LFP DAIARAK YL    GG+GAYSDS+GLP VR+E A+F+ RRDG+ ++ + IFLT+GAS+GV   L  ++RG  DGILVP+PQYPLYSA I LL GS+V YYL E   W LD + L ++V  A+ QG+ VR MV INPGNPTGQCLS  +L+ ++KF +  KLVL+ DEVYQ NIYQ  RPFIS++ V + MG+PF+  V++ +FHT SKG +GECG RGG  E+ N   RV +E+YK+ASI LSPNV  Q+ +GLM++ P+PGD SY Q+ARE + +L+SLRRRA+ +TD FNSC+ +VC  TEGAMYSFP+I LP GA+ AAK AGK PDVFYCLKLLE TGISTVPGSGF Q++G FH RTTILP E +   I+  F  F+  FMA+Y    G S
Sbjct:    3 LEYDLLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGMLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIQRRDGYPSDPELIFLTDGASKGVMQILNCVIRGEGDGILVPVPQYPLYSATISLLGGSLVPYYLDESENWGLDVNNLRQSVAQARSQGISVRAMVIINPGNPTGQCLSEANLKEILKFCYNEKLVLLGDEVYQQNIYQDERPFISSKKVLMDMGSPFSKGVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPRVVEEIYKVASIALSPNVSAQIFMGLMVSPPKPGDISYDQFARESKGILESLRRRAKIMTDGFNSCKNVVCNFTEGAMYSFPQIRLPPGALQAAKQAGKVPDVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEEMPEIMDSFKKFNDEFMAQYDNGFGYS 476          
The following BLAST results are available for this feature:
BLAST of NO17G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24220.11.300e-25889.46alanine-2-oxoglutarate aminotransferase 2 [Nannoch... [more]
CBJ25743.11.600e-18163.67nicotinanamine aminotransferase A [Ectocarpus sili... [more]
XP_018436204.14.200e-16960.55PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
XP_013605461.15.500e-16960.76PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
XP_009115544.17.100e-16960.34PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
XP_009110107.19.300e-16960.76PREDICTED: glutamate--glyoxylate aminotransferase ... [more]
AAL24255.12.100e-16860.29At1g23310/F26F24_4 [Arabidopsis thaliana] >AAO1155... [more]
PAN09220.12.100e-16860.51hypothetical protein PAHAL_B00051 [Panicum hallii][more]
PUZ68197.13.500e-16860.30hypothetical protein GQ55_2G005900 [Panicum hallii... [more]
XP_013730520.14.600e-16860.55glutamate--glyoxylate aminotransferase 1 [Brassica... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002967NSK002967Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01840.1NO17G01840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599737gene_7708Nannochloropsis oceanica (N. oceanica CCMP1779)gene
OsNAAT1gene6242Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01840.1NO17G01840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01840 ID=NO17G01840|Name=NO17G01840|organism=Nannochloropsis oceanica|type=gene|length=2121bp
CAGAACGACCTTGTCACTGAGACACTGCCAGGGCGCGCAACCGTGGGCAA
TTTACCCCCTTTCTCAAGTAGCAGCATCAGCAGCAGCGGCCGCCGCAGCA
GTATCACAACGCGCACAAGCACCATGGCGTCGTCGCAACCACGTGTCCTG
AACTATGACATGTTGCCGGAGCATGTCAAACGTTGCGAGTACGCCGTCCG
TGGAGAGCTGTATCGTGCAGCCACGGCTAGGGTGGCCGCGGGCAAGGAGG
TTATCTTTACCAACGTGGGCAATCCCCACGGCTTGGGCCAGAAGCCCCTG
ACCTTCATTCGCCAAGTGTTTGCCCTTGTCAGTGCCCCTTTTCTGTTGGA
TCACCCCGATGTCCAACGCCTGTTTCCGCGCGACGCCATTGCCCGTGCCA
AGGCATACCTGAAGGCCGCGCCGGGCGGGATAGGCGCCTACAGCGACTCC
AAGGGTCTCCCCATCGTCCGGCAAGAGTTTGCCGACTTTCTGATGCGGCG
TGATGGCTTTGGTGCCAACATTGATAATATATTTCTTACTAACGGGGCCA
GCGAGGGCGTGCGCCTGGGCTTGACTGCGTTGCTCCGCGGGCCGCAAGAC
GGCATCCTGGTGCCCATTCCCCAGTATCCGCTATACTCGGCCGCCATACA
GCTCTTGAACGGGAGCATGGTCGGCTACTACTTGCGCGAGGAGTCTGGCT
GGTCCCTTGACTTCGACGAGCTGGAGCGGGCGGTACGGGACGCGAAGCGG
CAGGGCGTGCAGGTGCGTGGGATGGTGTTCATCAACCCGGGCAATCCCAC
GGGCCAGTGCCTTAGCCGCAAGGACTTGGAGGGCCTCATCAAGTTCGCAC
ACAAGCACAAGCTTGTCCTGATGGCGGACGAAGTTTACCAGGACAATATC
TATCAGAGCGTGCGGCCCTTCATCTCGGCGCGGCACGTGGCCCTGAGCAT
GGGCGCACCCTTCGCCACGGACGTGGAGATTGCCACCTTCCACACGGCCT
CCAAAGGCGTGTACGGTGAGTGTGGCTTTCGCGGGGGGGTGATGGAGCTG
CTCAACTTTGATCAGCGCGTGTCCGACGAACTGTACAAGCTGGCATCTAT
CAACCTGTCGCCCAACGTTCCCGGCCAGGTTGTGCTGGGGCTGATGATCA
ATGGGCCTCGACCGGGAGACGAGTCGTATGCACAATACGCGCGTGAGAAG
CAGGAGCTGCTTGACTCGCTTCGACGCCGGGCCCGGGCCATCACTGACGC
CTTCAACAGCTGTGAGGGGATAGTGTGTCAGGAGACGGAGGGTGCCATGT
ACTCCTTTCCAAAGATCACCCTTCCGGCCGGGGCGATGGCGGCGGCTAAG
GCGGCAGGCAAGGCACCCGATGTCTTTTACTGCCTCAAGCTTCTGGAGCA
GACGGGCATTTCTACTGTACCGGGATCGGGCTTCAAGCAACGGGACGGGA
CGTTCCACTTCCGCACCACCATCTTGCCGCCCGAGAGCCAGTTCCAATCA
ATCATTCAGCGGTTTCTGGCCTTCCATTCCGCCTTCATGGCCGAGTACAA
GGGCTCGAGTGGGACAAGTGTCAGTACACGCGCGCGATTGTAGATAGCGA
AAAAAGTGAGATCTGAGAGGGAGAGACGGTGGGGAGAGGAAAAACAAAGA
GGAATGTGTCTAGACAGAATAGAAAGGGAAAGAGGAGATGAGTGGGCCGG
GTATCGTGTCAATTTCTTTGTGGCTATTGACGTAAGCGTCACCGGCATAC
GTAAGGCATGTCTTGCGCTTCTTTAAAAATCGTGCCTGTGAAAGGATGAT
GCATTTTTGTGTTCTTGGTGTCTGTGTGTGTGCGAAAGCGCGTGTGAGGG
TGTAGCATGCGATTATTAGAGACCTGCGAATCGACACTTCATTACGATAT
ACATACGAGCAGGTAGAGCTGTCCGCGCGTATTAGCTCCGTACAATAGAG
ACTCATGGGGCTCTGCAACCGCGAGCATCGTCATCATGTGTGCGTGGAGG
AGATAAAGATGGGAAGCCAAAAGTTTTTTTCTTTTGCAGCAATAGATAAT
ATCAAACGATTTAAGTAGGAGAGAAAGAAGAGAATCAAGGGTAAAACACC
AGCTTTCCCATCCAAAAAAGA
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protein sequence of NO17G01840.1

>NO17G01840.1-protein ID=NO17G01840.1-protein|Name=NO17G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MASSQPRVLNYDMLPEHVKRCEYAVRGELYRAATARVAAGKEVIFTNVGN
PHGLGQKPLTFIRQVFALVSAPFLLDHPDVQRLFPRDAIARAKAYLKAAP
GGIGAYSDSKGLPIVRQEFADFLMRRDGFGANIDNIFLTNGASEGVRLGL
TALLRGPQDGILVPIPQYPLYSAAIQLLNGSMVGYYLREESGWSLDFDEL
ERAVRDAKRQGVQVRGMVFINPGNPTGQCLSRKDLEGLIKFAHKHKLVLM
ADEVYQDNIYQSVRPFISARHVALSMGAPFATDVEIATFHTASKGVYGEC
GFRGGVMELLNFDQRVSDELYKLASINLSPNVPGQVVLGLMINGPRPGDE
SYAQYAREKQELLDSLRRRARAITDAFNSCEGIVCQETEGAMYSFPKITL
PAGAMAAAKAAGKAPDVFYCLKLLEQTGISTVPGSGFKQRDGTFHFRTTI
LPPESQFQSIIQRFLAFHSAFMAEYKGSSGTSVSTRARL*
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Synonyms
Publications