NO17G01830, NO17G01830 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01830
Unique Name	NO17G01830
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1560
Alignment location	chr17:526199..527758 +

Link to JBrowse

Properties


Property Name	Value
Description	Amino acid permease family protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:526199..527758 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1

Homology

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: EWM24218.1 (amino acid permease family protein [Nannochloropsis gaditana])

HSP 1 Score: 707.6 bits (1825), Expect = 2.900e-200
Identity = 356/493 (72.21%), Postives = 408/493 (82.76%), Query Frame = 0

Query:    1 MNEAARPLLSGKAVTTLVTPPLSPRKDHQIGTAALAALIFFSVSGGPFGMEECVLAGGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGIIQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRRCCVFLQDPFEASSATAGAWEPLMVVQVYGTD 494
            M+E   PLL+ K    +V+PP    K+HQIGTAALAALIFFSVSGGPFGMEE V + GPL+++VGL+VLP+LWS PEALITAE APAF E +GSVAWVE+AFGPFWGWMKG+LSWLSGVTDNALYPVLI DYL SFF KEAE IGV  G+HRVLLLLGLTLVLTYLNWRGLDVVG AAI+LM LCMLPFV+MC+A ++QY  LD +RLG+LPEGGWGAVQWSS+LNILFWQLNYWDSV+TFAGDVK+PG AFPRALA+A+ +VVLSTL+PLA AV GT F+Y++YTDGFFGK+G+ LVGKWLG ++ALAAALSSVGMFEAEMASDAFSLMG+AERGHLPA FA RSRHGTP+AAI+CSA GI FLA+                   IEF AFVRLRV  P + RPYRIPLGT G+  ML+GPV+LLVCM+AMAPLK W ICGVAV++GCGLY+ LHHP TRR CVFLQDPFE     + +     V++VYGTD
Sbjct:    1 MSETIAPLLAAKK-AVIVSPPSPSPKEHQIGTAALAALIFFSVSGGPFGMEEAVQSAGPLVTIVGLLVLPMLWSVPEALITAECAPAFAEPSGSVAWVESAFGPFWGWMKGYLSWLSGVTDNALYPVLIADYLTSFFHKEAETIGVVDGLHRVLLLLGLTLVLTYLNWRGLDVVGTAAIVLMTLCMLPFVIMCIAALVQYNKLDGSRLGELPEGGWGAVQWSSLLNILFWQLNYWDSVATFAGDVKNPGKAFPRALAIAVALVVLSTLVPLATAVTGTRFAYTEYTDGFFGKVGSDLVGKWLGALIALAAALSSVGMFEAEMASDAFSLMGLAERGHLPAFFAHRSRHGTPSAAIVCSACGITFLASMSFLEIVQVLNFLYMLAMLIEFAAFVRLRVVLPCLPRPYRIPLGTWGICAMLSGPVMLLVCMLAMAPLKTWLICGVAVLMGCGLYYVLHHPCTRRRCVFLQDPFERRRDASTS----SVLRVYGTD 488

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: XP_023921971.1 (probable polyamine transporter At3g19553 [Quercus suber] >POE98534.1 putative polyamine transporter [Quercus suber])

HSP 1 Score: 369.0 bits (946), Expect = 2.400e-98
Identity = 198/448 (44.20%), Postives = 283/448 (63.17%), Query Frame = 0

Query:   25 RKDHQIGTAALAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGI-----IQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRRCCVF 467
            +K+ ++    L ALIF+ VSGGPFG+E+ V A GGPLLS++G ++ P++WS PEAL+TAEL+ +FPE+ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL   F    ++        R+  LLG+T+ LTYLN+RGL +VG +A+ L    + PFVVM +  I      Q+  +DF +L            W    N +FW LNYWD  ST AG+V++P   FP+AL  A+ +VVLS L+PL      T  + SD++DG+F ++G  + G WL   + +AAA+S++G+FEAEM+ DAF L+GM+E G LPA+FA RS++GTPT +ILCSA G+ FL+                    +EF AF++LR+ +P + RPY++PLGT GV+++   P ++LV +M +A LK + + G  ++VG  LY  L H   R+   F
Sbjct:   16 KKNPKLTVLPLIALIFYEVSGGPFGVEDSVKAGGGPLLSLLGFLIFPLIWSIPEALVTAELSTSFPENGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFNQLAA------RIPALLGITVSLTYLNYRGLHIVGFSAVTLAAFSLCPFVVMGILSIPRIRPKQWLVVDFKKL-----------DWRGYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALFGAVVLVVLSYLIPLLAGTGATNSAPSDWSDGYFAEVGMLIGGYWLKWWIQVAAAMSNMGLFEAEMSGDAFQLLGMSEMGMLPAIFASRSKYGTPTISILCSATGVIFLSWMSFQEILEFLNFLYAIGMLLEFAAFIKLRIKKPDLHRPYKVPLGTFGVTMLCLPPALMLVLVMCLASLKTFLVSGAVIIVGFLLYPTLVHAKDRKWTQF 446

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: CBJ26061.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 367.9 bits (943), Expect = 5.400e-98
Identity = 200/446 (44.84%), Postives = 275/446 (61.66%), Query Frame = 0

Query:   35 LAALIFFSVSGGPFGMEECVLAGGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGIIQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAG--------------TTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRRCCVF 467
            L  LIF+ VSGGPFG+E  V A GP L+++G + LP++WS PEAL+TAEL+  FPE+AG VAWV  AFGPFWGWM+G+ SW+SGV DN+LYPVL  DYLVS   ++  +     G+ R   ++ L L L+YL +RGL VVG  AI +    +LPFVV+ + G+      +       P+GGWGA++W + LN++FW LNYWDS ++FAG+V++PG  +PRAL   + +VVL   LP+ V                      +S + DG+F ++  A+ G+WLGV V LAAA +++G+FEAEM SDA  LMGMAERG LPA+FA+R  HG  T AI+ S+ G+AFL                     +EF AF++LRVS   M RPY IPLGT GV ++L      ++ + A + +  W + GVA+++G GLY  L      + C F
Sbjct:   17 LVLLIFYGVSGGPFGVEPVVSAAGPFLALMGFLFLPMVWSIPEALVTAELSTTFPEAAGCVAWVSTAFGPFWGWMEGYASWMSGVADNSLYPVLFLDYLVSLLPRDNFL--REDGLGRWGCVVCLNLALSYLAYRGLRVVGRTAIAVAVFSLLPFVVLVLWGLPDCTMPE--SWISPPDGGWGAIRWGTYLNVMFWNLNYWDSAASFAGEVENPGRTYPRALVACVALVVLCYGLPIFVGTGAXXXXXXXXXXXXXXXXXXWSLWEDGYFAEVAEAITGRWLGVWVVLAAAAANIGLFEAEMTSDALQLMGMAERGMLPAVFAKRGPHGISTLAIVASSTGVAFLGLLGFETIVEILNLLYCFAEILEFVAFIKLRVSHRDMHRPYEIPLGTVGVCLLLLPAASFVLLLAAFSSVITWVVSGVALLIGVGLYPGLLLAKREKWCEF 458

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: EOX98434.1 (Amino acid permease family protein isoform 1 [Theobroma cacao] >EOX98435.1 Amino acid permease family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 366.3 bits (939), Expect = 1.600e-97
Identity = 199/438 (45.43%), Postives = 277/438 (63.24%), Query Frame = 0

Query:   35 LAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGI-----IQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRRCCVF 467
            L ALIF+ VSGGPFG+E+ V A GGPLLS++G ++ P++WS PEAL+TAELA +FPE+ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL   F     +I       R+  LLG+T+ LTYLN+RGL +VG +A+ L    + PF+VM +  I      Q+  +DF +           V+W    N +FW LNYWD  ST AG+V++P   FP+AL  A+ +VV S L+PL         S S++TDG+F ++G  + G WL   +  AAA+S++G+FEAEM+ DAF L+GM+E G LPA+FA RS++GTPT +ILCSA G+ FL+                    +EF AF++LRV +P + RPYR+PL T GV+++   P +LLV +M +A +K + + G+ ++VG  LY AL H   R+   F
Sbjct:   26 LIALIFYEVSGGPFGVEDSVRAGGGPLLSLLGFLIFPLIWSIPEALVTAELATSFPENGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFNNLIA------RIPALLGITVSLTYLNYRGLHIVGFSAVSLAAFSLFPFLVMGILSIPRIKPKQWLVVDFKK-----------VEWRGYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALLGAVVLVVSSYLIPLLAGTGALNSSSSEWTDGYFAEVGMLIGGFWLKWWIQAAAAMSNLGLFEAEMSGDAFQLLGMSEMGMLPAIFASRSKYGTPTVSILCSATGVIFLSWMSFQEILEFLNFLYSIGMLLEFAAFIKLRVKKPDLHRPYRVPLQTFGVTMLCLPPALLLVLVMCLASVKTFVVSGMVIIVGIFLYPALVHAKNRKWTQF 446

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: XP_007042604.2 (PREDICTED: probable polyamine transporter At3g19553 [Theobroma cacao])

HSP 1 Score: 365.9 bits (938), Expect = 2.000e-97
Identity = 199/438 (45.43%), Postives = 277/438 (63.24%), Query Frame = 0

Query:   35 LAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGI-----IQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRRCCVF 467
            L ALIF+ VSGGPFG+E+ V A GGPLLS++G ++ P++WS PEAL+TAELA +FPE+ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL   F     +I       R+  LLG+T+ LTYLN+RGL +VG +A+ L    + PF+VM +  I      Q+  +DF +           V+W    N +FW LNYWD  ST AG+V++P   FP+AL  A+ +VV S L+PL         S S++TDG+F ++G  + G WL   +  AAA+S++G+FEAEM+ DAF L+GM+E G LPA+FA RS++GTPT +ILCSA G+ FL+                    +EF AF++LRV +P + RPYR+PL T GV+++   P +LLV +M +A +K + + G+ ++VG  LY AL H   R+   F
Sbjct:   26 LIALIFYEVSGGPFGVEDSVRAGGGPLLSLLGFLIFPLIWSIPEALVTAELATSFPENGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFNNLIA------RIPALLGITVSLTYLNYRGLHIVGFSAVSLAAFSLFPFLVMGILSIPRIKPKQWLVVDFKK-----------VEWRGYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALLGAVVLVVSSYLIPLLAGTGALNSSSSEWTDGYFAEVGMLIGGFWLKWWIQAAAAMSNLGLFEAEMSGDAFQLLGMSEMGMLPAIFASRSKNGTPTVSILCSATGVIFLSWMSFQEILEFLNFLYSIGMLLEFAAFIKLRVKKPDLHRPYRVPLQTFGVTMLCLPPALLLVLVMCLASVKTFVVSGMVIIVGIFLYPALVHARNRKWTQF 446

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: XP_022028034.1 (probable polyamine transporter At3g19553 [Helianthus annuus] >OTG30942.1 putative amino acid permease family protein [Helianthus annuus])

HSP 1 Score: 364.0 bits (933), Expect = 7.700e-97
Identity = 199/481 (41.37%), Postives = 290/481 (60.29%), Query Frame = 0

Query:    1 MNEAARPLLSGKAVTTLVTPPLSPRKDHQIGTAALAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGI-----IQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRRCCVFLQDPFEASS 476
            M     P+L+    TT        + + ++    L ALIF+ VSGGPFG+E+ V + GG LLS++G ++ P+ WS PEAL+TAELA +FP++ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL    +    V    +   RV +L+GLT++LTYLN+RGL +VG +A++L    +LPFVVM +  I      ++ S+DF +           V+W    N +FW LNYWD  ST AG+V+DP   FP+AL  A+ +VV S L+PL          Y D+TDG+F ++G  + G WL   + +A+A+S++G+FEAEM+SDAF L+GM+E G LP++FA RS+ GTPT +ILCSA G+ FL+                     EF AF++LR+ +P + RPY++PL T   +++   P  LL+ +M +A  + + + GV + VGC LY AL     ++   F+ D  + +S
Sbjct:    1 MGSNKNPILTNDPNTT------DKKSNPKLTLLPLIALIFYEVSGGPFGVEDSVRSGGGALLSLLGFLIFPLFWSIPEALVTAELATSFPKNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYL----KHSVPVFDQLYA--RVPVLIGLTVLLTYLNYRGLHIVGTSAVVLACFSLLPFVVMGIVSIPKIRPKRWVSVDFKK-----------VEWRGYFNSMFWNLNYWDKASTLAGEVEDPSRTFPKALYGAVILVVCSYLIPLLAGTGSLDSDYRDWTDGYFAEVGMLIGGSWLKWWIQVASAMSNLGLFEAEMSSDAFQLLGMSEMGMLPSVFASRSKFGTPTISILCSATGVIFLSWMSFQEILELLNFLYAIGMLFEFAAFIKLRLKKPDLHRPYKVPLKTFSATLLCVPPAFLLILVMCLASARTFLVTGVVLFVGCILYSALMQMKIKKWAHFISDDDDVNS 458

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: XP_022745283.1 (probable polyamine transporter At3g19553 [Durio zibethinus])

HSP 1 Score: 364.0 bits (933), Expect = 7.700e-97
Identity = 193/433 (44.57%), Postives = 274/433 (63.28%), Query Frame = 0

Query:   35 LAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGIIQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRRCCVF 467
            L ALIF+ VSGGPFG+E+ V A GGPLLS++G ++ P++WS PEAL+TAELA +FPE+ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL   F     ++       R+  LLG+T+ LTYLN+RGL +VG +A+ L    + PF+VM +  I Q +   +  +          V W    N +FW LNYWD  ST AG+V++P   FP+AL  A+ +VV S L+PL         SY ++TDG+F ++G  + G WL   +  AAA+S++G+FEAEM+ DA+ L+GM+E G LPA+FA RS++GTPT +ILCSA G+ FL+                    +EF AF++LR+ +P + RPYR+PL T GV+++   P +LLV +M +A +K + + G+ +++G  LY AL H   R+   F
Sbjct:   26 LIALIFYEVSGGPFGIEDSVRAGGGPLLSLLGFLIFPLIWSIPEALVTAELATSFPENGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFNNLVA------RIPALLGITVSLTYLNYRGLHIVGFSAVSLAAFSLFPFLVMGILSIPQIKPTQWLVV------DLKKVDWRGYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALLGAVVLVVSSYLIPLLAGTGALNSSYGEWTDGYFAEVGMLIGGFWLKCWIQAAAAMSNLGLFEAEMSGDAYQLLGMSEMGLLPAIFASRSKYGTPTFSILCSATGVIFLSWMSFQEILEFLNFLYSIGMLLEFAAFIKLRMKKPDLHRPYRVPLQTFGVTMLCLPPSLLLVLVMCLASIKTFVVSGIVIVIGIFLYPALVHAKNRKWTQF 446

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: XP_018827751.1 (PREDICTED: probable polyamine transporter At3g19553 [Juglans regia] >XP_018827752.1 PREDICTED: probable polyamine transporter At3g19553 [Juglans regia])

HSP 1 Score: 362.5 bits (929), Expect = 2.300e-96
Identity = 194/434 (44.70%), Postives = 276/434 (63.59%), Query Frame = 0

Query:   35 LAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGI-----IQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRR 463
            L ALIF+ VSGGPFG+E+ V A GGPLLS++G ++ P++WS PEAL+TAELA +FPE+ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL   F   + ++       R+  LLG+T+ LTYLN+RGL +VG +A+ L    + PF+VM +  I      Q+  +DF +           V W    N +FW LNYWD  ST AG+V++P   FP+AL  A+ +VVLS L+PL      T  + S+++DG+F ++G  + G WL   +  AAA+S++G+FEAEM+ DAF L+GM+E G LPA+FA RS++GTPT +ILCSA G+ FL+                    +EF AF++LR+ +P + RPY++PL T GV+++   P ++LV +M +A  K + + GV ++ G  LY AL H   R+
Sbjct:   26 LIALIFYEVSGGPFGVEDSVRAGGGPLLSLLGFLIFPLVWSIPEALVTAELATSFPENGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFSRLVA------RIPALLGITVSLTYLNYRGLHIVGFSAVTLAAFSLFPFLVMVILSIPRIRPKQWLVVDFKK-----------VDWRGYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALFGAVVLVVLSYLIPLLAGTGATKSAPSEWSDGYFAEVGMLIGGYWLKWWIQAAAAMSNMGLFEAEMSGDAFQLLGMSEMGMLPAIFASRSKYGTPTISILCSATGVIFLSWMSFQEILEFLNFLYAIGMLLEFAAFIKLRIKKPDLHRPYKVPLQTFGVTMLCLPPALMLVLVMCLASAKTFLVSGVVMITGFLLYPALVHAKDRK 442

[Close]

BLAST of NO17G01830 vs. NCBI_GenBank
Match: XP_022726063.1 (probable polyamine transporter At3g19553 [Durio zibethinus])

HSP 1 Score: 362.5 bits (929), Expect = 2.300e-96
Identity = 197/434 (45.39%), Postives = 278/434 (64.06%), Query Frame = 0

Query:   35 LAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGI-----IQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRR 463
            L ALIF+ VSGGPFG+E+ V A GGPLLS++G ++ P++WS PEAL+TAELA +FP++ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL   F     +I       R+  LLG+T+ LTYLN+RGL +VG +A+ L    + PF+VM +  I      Q+  +DF +           V W    N +FW LNYWD  ST AG+V++P   FP+AL  A+ VVV S L+PL +A  G   S S++TDG+F ++G  + G WL   + +AAA+S++G+FEAEM+ DAF L+GM+E G LPA+FA RS++GTPT +ILCSA G+ FL+                    +EF AF++LR+ +P + RPYR+PL T GV+++   P +LLV +M +A +K + + G+ +++G  LY A  H   R+
Sbjct:   26 LIALIFYEVSGGPFGVEDSVRAGGGPLLSLLGFLIFPLIWSIPEALVTAELATSFPKNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFNNLIA------RIPALLGITVSLTYLNYRGLHIVGLSAVFLAAFSLFPFLVMGIISIPRIKPKQWLIVDFKK-----------VDWRGYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALLGAVVVVVCSYLIPL-LAGTGALNSSSEWTDGYFAEVGMLIGGFWLKWWIQVAAAMSNLGLFEAEMSGDAFQLLGMSEMGMLPAIFASRSKYGTPTVSILCSATGVIFLSWMSFQEILEFLNFLYSIGMLLEFAAFIKLRIKKPDLHRPYRVPLHTFGVTMLCLPPALLLVLVMCLASVKTFIVSGIVIIIGILLYPASLHANNRK 441

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BLAST of NO17G01830 vs. NCBI_GenBank
Match: XP_010065932.1 (PREDICTED: probable polyamine transporter At3g19553 [Eucalyptus grandis] >KCW63639.1 hypothetical protein EUGRSUZ_G01271 [Eucalyptus grandis])

HSP 1 Score: 361.7 bits (927), Expect = 3.800e-96
Identity = 195/434 (44.93%), Postives = 272/434 (62.67%), Query Frame = 0

Query:   35 LAALIFFSVSGGPFGMEECVLA-GGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEAAFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGIHRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGI-----IQYQSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGHAFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGKWLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGTPTAAILCSALGIAFLATXXXXXXXXXXXXXXXXXXXIEFGAFVRLRVSRPLMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCGLYFALHHPATRR 463
            L ALIF+ VSGGPFG+E+ V + GGPLLS++G ++ P+ WS PEAL+TAELA +FPE+ G V W+ +AFGPFWG+ +GF  W SGV DNALYPVL  DYL   F     +I       RV  LLG+T  LTYLN+RGL +VG +A+ L    +LPF VM +  I      ++ ++DF++           V W    N +FW LNYWD  ST AG+V++P   FP+AL  A+ +V+ S L+PL           SD++DG+F ++G  + G WL   +  AAA+S++G+FEAEM+SDAF L+GM+E G LP +FAQRS++GTPT +ILCSA G+ FL+                    +EF AF+RLR+ +P + RPYR+PL T GV+++   P +LLV +M +A  K + + G  ++VG  LY  L H   ++
Sbjct:   28 LIALIFYEVSGGPFGVEDSVKSGGGPLLSLLGFLIFPLFWSVPEALVTAELATSFPENGGYVLWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYLKHSFPIFNRLIA------RVPALLGITASLTYLNYRGLHIVGFSAVTLAAFSLLPFAVMGILSIPRIRPAKWVAVDFSK-----------VDWRGYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALFGAVVLVMCSYLIPLLAGTGALNTPASDWSDGYFAQVGFLIGGAWLRWWIQAAAAMSNMGLFEAEMSSDAFQLLGMSEMGLLPTIFAQRSKYGTPTISILCSATGVVFLSWMTFQEILEFLNFLYAIGMILEFAAFIRLRIKKPDLHRPYRVPLQTFGVTMLCVPPTLLLVLVMCLASAKTFLVSGTVILVGLLLYPLLIHARDKK 444

The following BLAST results are available for this feature:

BLAST of NO17G01830 vs. NCBI_GenBank

BLAST of NO17G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24218.1	2.900e-200	72.21	amino acid permease family protein [Nannochloropsi...	[more]
XP_023921971.1	2.400e-98	44.20	probable polyamine transporter At3g19553 [Quercus ...	[more]
CBJ26061.1	5.400e-98	44.84	conserved unknown protein [Ectocarpus siliculosus]	[more]
EOX98434.1	1.600e-97	45.43	Amino acid permease family protein isoform 1 [Theo...	[more]
XP_007042604.2	2.000e-97	45.43	PREDICTED: probable polyamine transporter At3g1955...	[more]
XP_022028034.1	7.700e-97	41.37	probable polyamine transporter At3g19553 [Helianth...	[more]
XP_022745283.1	7.700e-97	44.57	probable polyamine transporter At3g19553 [Durio zi...	[more]
XP_018827751.1	2.300e-96	44.70	PREDICTED: probable polyamine transporter At3g1955...	[more]
XP_022726063.1	2.300e-96	45.39	probable polyamine transporter At3g19553 [Durio zi...	[more]
XP_010065932.1	3.800e-96	44.93	PREDICTED: probable polyamine transporter At3g1955...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL156	nonsL156	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR035	ncniR035	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR028	ngnoR028	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002966	NSK002966	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO17G01830.1	NO17G01830.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|626103	gene_7709	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100020g18	gene6241	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO17G01830.1	NO17G01830.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO17G01830 ID=NO17G01830|Name=NO17G01830|organism=Nannochloropsis oceanica|type=gene|length=1560bp
ATGAATGAAGCCGCCAGGCCCTTACTGTCTGGTAAGGCAGTCACGACTCT
CGTTACCCCACCCTTGTCCCCACGCAAGGATCATCAAATTGGTACCGCAG
CATTGGCTGCCTTGATATTCTTCAGCGTTAGTGGTGGGCCCTTCGGAATG
GAAGAATGCGTGTTGGCAGGAGGCCCTCTTCTGAGCATGGTTGGCCTTGT
CGTGCTTCCCGTGCTTTGGTCAGCACCGGAGGCCCTTATTACCGCGGAAC
TCGCCCCTGCCTTCCCTGAAAGCGCAGGGTCAGTGGCGTGGGTGGAGGCA
GCCTTTGGCCCCTTTTGGGGTTGGATGAAAGGCTTTCTTTCTTGGCTCAG
TGGCGTGACGGACAACGCACTGTATCCCGTCCTTATCTGCGACTACCTGG
TCTCGTTCTTTGAAAAGGAAGCCGAGGTAATTGGCGTCGCCCACGGGATC
CACCGCGTCTTGCTCTTGCTAGGCCTGACGCTGGTGCTCACGTACCTCAA
CTGGCGCGGGTTGGACGTGGTGGGTAATGCGGCTATTTTATTGATGGGAC
TATGTATGCTGCCGTTTGTCGTGATGTGTGTCGCGGGCATCATCCAGTAC
CAGAGCCTTGATTTTACGCGGCTGGGCCAGTTACCCGAAGGAGGATGGGG
GGCCGTGCAATGGTCGAGCATTCTCAACATTTTATTTTGGCAACTCAACT
ATTGGGACTCTGTTTCCACCTTTGCAGGCGATGTCAAGGACCCCGGCCAT
GCCTTTCCACGGGCCCTGGCCGTTGCACTGTTTGTGGTGGTGCTTAGCAC
CCTCCTCCCGCTAGCCGTCGCCGTGGCGGGCACGACTTTTTCGTACAGTG
ATTATACGGACGGGTTCTTCGGGAAGATTGGCACGGCTTTGGTGGGAAAG
TGGCTGGGGGTGATGGTTGCGCTGGCGGCGGCCTTGTCGTCGGTGGGCAT
GTTTGAGGCAGAGATGGCAAGCGATGCCTTCTCGCTCATGGGCATGGCGG
AGCGAGGGCATCTCCCTGCACTCTTTGCCCAGCGCTCACGGCACGGAACG
CCTACTGCTGCCATTTTATGTTCCGCTCTCGGTATCGCTTTCTTGGCGAC
CATGTCCTTTTTGGAAATACTGGAAGTGCTGAACTTTTTGTACATGCTGG
CCATGCTGATTGAGTTTGGCGCCTTTGTTCGCCTGCGCGTGTCGCGGCCT
CTAATGCGTCGGCCATACCGTATCCCGCTCGGCACGGCTGGAGTGAGCGT
GATGTTGACGGGGCCCGTGGTCTTGTTGGTCTGCATGATGGCCATGGCTC
CTCTGAAAGCTTGGGCCATCTGCGGGGTGGCTGTGATGGTGGGATGTGGG
TTGTACTTTGCCCTGCACCACCCTGCCACGCGCCGGTGTTGCGTCTTTTT
GCAGGATCCATTTGAAGCTTCGAGTGCCACAGCGGGTGCATGGGAGCCCC
TAATGGTCGTGCAGGTTTACGGGACAGACGTAGTGGAGGAGGGGGAGGGG
GAAGAGGAGGAAGAGAAGGAGGAGAGGAAGAAGGGGACGGGGGTGATGCC
ATACGTGTGA

protein sequence of NO17G01830.1

>NO17G01830.1-protein ID=NO17G01830.1-protein|Name=NO17G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=520bp
MNEAARPLLSGKAVTTLVTPPLSPRKDHQIGTAALAALIFFSVSGGPFGM
EECVLAGGPLLSMVGLVVLPVLWSAPEALITAELAPAFPESAGSVAWVEA
AFGPFWGWMKGFLSWLSGVTDNALYPVLICDYLVSFFEKEAEVIGVAHGI
HRVLLLLGLTLVLTYLNWRGLDVVGNAAILLMGLCMLPFVVMCVAGIIQY
QSLDFTRLGQLPEGGWGAVQWSSILNILFWQLNYWDSVSTFAGDVKDPGH
AFPRALAVALFVVVLSTLLPLAVAVAGTTFSYSDYTDGFFGKIGTALVGK
WLGVMVALAAALSSVGMFEAEMASDAFSLMGMAERGHLPALFAQRSRHGT
PTAAILCSALGIAFLATMSFLEILEVLNFLYMLAMLIEFGAFVRLRVSRP
LMRRPYRIPLGTAGVSVMLTGPVVLLVCMMAMAPLKAWAICGVAVMVGCG
LYFALHHPATRRCCVFLQDPFEASSATAGAWEPLMVVQVYGTDVVEEGEG
EEEEEKEERKKGTGVMPYV*

Synonyms

Publications