NO17G01790, NO17G01790 (gene) Nannochloropsis oceanica

Overview
NameNO17G01790
Unique NameNO17G01790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4904
Alignment locationchr17:515029..519932 -

Link to JBrowse

Properties
Property NameValue
DescriptionSUZ domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:515029..519932 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036867R3H_dom_sf
IPR001374R3H_ss-bd
IPR024771SUZ
Homology
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: EWM24250.1 (SUZ domain protein [Nannochloropsis gaditana])

HSP 1 Score: 280.8 bits (717), Expect = 9.200e-72
Identity = 197/381 (51.71%), Postives = 227/381 (59.58%), Query Frame = 0 
Query:    1 MADEDDWGPAPLPDFNRLHLGGRDAPATSGSTAASEAEVGGVGDGLSSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTN-DASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRGKFMAALSGDRRSSTPPQSSEQRQWLEDGQKRS--GXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHPRPRGL 379
            MADE+DWGPAPLPDFNRL LGGR APATS +   SEA  G  G GLSSAG VAVT+ E DAAIDP+LTGAM++PRERVNVL+YEDAMVQFMKAGTKQQ LELSP+SSYHRL+LYRLA RFGL H + E E   VG +   NR++  FK PQS +P LLLIDTCGK+G N              VMRLM+R R   G        ++  G+GEEK  ST NG +S+ DREKAY                  XXXXXXXXXXXXXX  PL   G       +   P      G GR     + + D  S+ PP +      LE+G + S                         W ESKVLWRNREAE+ DPDF+RH  PRGL
Sbjct:    1 MADEEDWGPAPLPDFNRLRLGGRGAPATSANVTPSEA-AGIAGKGLSSAGIVAVTTVERDAAIDPILTGAMDNPRERVNVLRYEDAMVQFMKAGTKQQQLELSPNSSYHRLVLYRLAHRFGL-HGAAEGE---VGADAGGNRSVKFFKTPQSSIPHLLLIDTCGKEGVNGXXXXXXXXXXXXXVMRLMQRRRTPGGDSEAKEGAVRGKGSGEEKTSSTVNGARSVIDREKAY---------AEARARIFGXXXXXXXXXXXXXXTRPLDSKG-------KTANPSNGAKLGLGRTSRAGSPAADGLSTPPPSAGP--GLLEEGARSSLEEEARKPRGGAGEQEEKCNGGKMEWGESKVLWRNREAERYDPDFVRHRPPRGL 358
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: ETO62834.1 (hypothetical protein F444_19335 [Phytophthora parasitica P1976])

HSP 1 Score: 117.9 bits (294), Expect = 1.000e-22
Identity = 141/343 (41.11%), Postives = 181/343 (52.77%), Query Frame = 0 
Query:   47 SSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAY------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRG----KFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            +S+  V   +A     +DPVL   +E+ RER+ +LK+ED +V+F+K   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK  QS +PR+LLID    + T   +      A AP + + +RS P  G  GG        GNG +K   T      + DRE+AY      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L+ G   QA GPD   GFG GRG      +A+ S  R     P  ++  ++    Q  +                       W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   87 NSSAPVGTATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLK-NPREPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTAQSAVPRVLLIDLSADRQTPAVT-----PASAPRIMMRKRSAPRLGANGG-------RGNGADKATPT------LQDRERAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNVLRHGSR-QAAGPDGSRGFGRGRGTVSSSMIASGSQSRSPEEGPSGNDSNEYARSSQPSA------------------PNAANWKESKVLWRNREQELNDPDFTRNHDAFRPR 387
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: XP_002907617.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64181.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 115.9 bits (289), Expect = 3.900e-22
Identity = 108/336 (32.14%), Postives = 146/336 (43.45%), Query Frame = 0 
Query:   44 DGLSSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRGKFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            DG +  GT    +A     +DPVL   +E+ RER+ +LK+ED +V+F+K   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK  QS +PR+LLID    + T   +      A AP + + +RS P  G  GG        GNG +K   T      + DRE+AY                                   +S     G +  QA GPD   GFG GRG   +  SG+   +  P+ S+                                   W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   82 DGSAPVGT---ATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLK-NPREPHLNFPPLSSYHRLIIHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTAQSAVPRVLLIDLSPDRQTPTVT-----PASAPKIMMRKRSAPRPGANGG-------RGNGADKATPT------LQDRERAY----------------AEARARIFGEDNGNAVVESVSTFSPHGSR--QAVGPDGSRGFGRGRG--ASPSSGNPGGNEYPRPSQ---------------------------PSALNAASWKESKVLWRNREQELNDPDFTRNHDAFRPR 344
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: ETI34029.1 (hypothetical protein F443_19386 [Phytophthora parasitica P1569] >ETK74390.1 hypothetical protein L915_18810 [Phytophthora parasitica] >ETL27820.1 hypothetical protein L916_18706 [Phytophthora parasitica] >ETM34260.1 hypothetical protein L914_18623 [Phytophthora parasitica] >ETP03917.1 hypothetical protein F441_19207 [Phytophthora parasitica CJ01A1] >KUF79209.1 R3H domain-containing protein 1 [Phytophthora nicotianae])

HSP 1 Score: 115.2 bits (287), Expect = 6.700e-22
Identity = 136/337 (40.36%), Postives = 174/337 (51.63%), Query Frame = 0 
Query:   47 SSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRG----KFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            +S+  V   +A     +DPVL   +E+ RER+ +LK+ED +V+F+K   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK  QS +PR+LLID    + T   +      A AP + + +RS P  G  GG        GNG +K   T              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L+ G   QA GPD   GFG GRG      +A+ S  R     P  ++  ++    Q  +                       W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   87 NSSAPVGTATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLK-NPREPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTAQSAVPRVLLIDLSADRQTPAVT-----PASAPRIMMRKRSAPRPGANGG-------RGNGADKATPTLQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVLRHGSR-QAAGPDGSRGFGRGRGTVSSSMIASGSQSRSPEEGPSGNDSNEYARSSQPSA------------------PNAANWKESKVLWRNREQELNDPDFTRNHDAFRPR 387
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: XP_008897272.1 (hypothetical protein PPTG_05475 [Phytophthora parasitica INRA-310] >ETN17744.1 hypothetical protein PPTG_05475 [Phytophthora parasitica INRA-310])

HSP 1 Score: 115.2 bits (287), Expect = 6.700e-22
Identity = 136/337 (40.36%), Postives = 174/337 (51.63%), Query Frame = 0 
Query:   47 SSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRG----KFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            +S+  V   +A     +DPVL   +E+ RER+ +LK+ED +V+F+K   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK  QS +PR+LLID    + T   +      A AP + + +RS P  G  GG        GNG +K   T              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L+ G   QA GPD   GFG GRG      +A+ S  R     P  ++  ++    Q  +                       W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   87 NSSAPVGTATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLK-NPREPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTAQSAVPRVLLIDLSADRQTPAVT-----PASAPRIMMRKRSAPRPGANGG-------RGNGADKATPTLQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVLRHGSR-QAAGPDGSRGFGRGRGTVSSSMIASGSQSRSPEEGPSGNDSNEYARSSQPSA------------------PNAANWKESKVLWRNREQELNDPDFTRNHDAFRPR 387
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: ETP32071.1 (hypothetical protein F442_19157 [Phytophthora parasitica P10297])

HSP 1 Score: 115.2 bits (287), Expect = 6.700e-22
Identity = 136/337 (40.36%), Postives = 174/337 (51.63%), Query Frame = 0 
Query:   47 SSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRG----KFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            +S+  V   +A     +DPVL   +E+ RER+ +LK+ED +V+F+K   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK  QS +PR+LLID    + T   +      A AP + + +RS P  G  GG        GNG +K   T              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L+ G   QA GPD   GFG GRG      +A+ S  R     P  ++  ++    Q  +                       W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   87 NSSAPVGTATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLK-NPREPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTAQSAVPRVLLIDLSADRQTPAVT-----PASAPRIMMRKRSAPRPGANGG-------RGNGADKATPTLQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVLRHGSR-QAAGPDGSRGFGRGRGTVSSSMIASGSQSRSPEEGPSGNDSNEYARSSQPSA------------------PNAANWKESKVLWRNREQELNDPDFTRNHDAFRPR 387
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: KUF95547.1 (Transient receptor potential channel pyrexia [Phytophthora nicotianae])

HSP 1 Score: 115.2 bits (287), Expect = 6.700e-22
Identity = 136/337 (40.36%), Postives = 174/337 (51.63%), Query Frame = 0 
Query:   47 SSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRG----KFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            +S+  V   +A     +DPVL   +E+ RER+ +LK+ED +V+F+K   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK  QS +PR+LLID    + T   +      A AP + + +RS P  G  GG        GNG +K   T              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L+ G   QA GPD   GFG GRG      +A+ S  R     P  ++  ++    Q  +                       W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   87 NSSAPVGTATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLK-NPREPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTAQSAVPRVLLIDLSADRQTPAVT-----PASAPRIMMRKRSAPRPGANGG-------RGNGADKATPTLQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVLRHGSR-QAAGPDGSRGFGRGRGTVSSSMIASGSQSRSPEEGPSGNDSNEYARSSQPSA------------------PNAANWKESKVLWRNREQELNDPDFTRNHDAFRPR 387
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: ETL81068.1 (hypothetical protein L917_18532 [Phytophthora parasitica])

HSP 1 Score: 113.6 bits (283), Expect = 1.900e-21
Identity = 136/337 (40.36%), Postives = 175/337 (51.93%), Query Frame = 0 
Query:   47 SSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGVQATGPDTLGGFGAGRGKFMAAL--SG--DRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            +S+  V   +A     +DPVL   +E+ RER+ +LK+ED +V+F+K   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK  QS +PR+LLID    + T   +      A AP + + +RS P  G  GG        GNG +K   T              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L+ G   QA GPD   GFG GRG   +++  SG   R     P  ++  ++    Q  +                       W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   87 NSSAPVGTATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLK-NPREPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTAQSAVPRVLLIDLSADRQTPAVT-----PASAPRIMMRKRSAPRPGANGG-------RGNGADKATPTLQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNVLRHGSR-QAAGPDGSRGFGRGRGTVSSSMIASGLQSRSPEEGPSGNDSNEYARSSQPSA------------------PNAANWKESKVLWRNREQELNDPDFTRNHDAFRPR 387
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: OWZ20604.1 (hypothetical protein PHMEG_0004960 [Phytophthora megakarya])

HSP 1 Score: 109.8 bits (273), Expect = 2.800e-20
Identity = 107/348 (30.75%), Postives = 147/348 (42.24%), Query Frame = 0 
Query:   37 AEVGGVGDGLSSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSGGGLKGGKGV-----QATGPDTLGGFGAGRGKFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            A+ GG     SSA  V   +A     +DPVL   +E+ RER+ +LK+ED +V+F++   ++  L   P SSYHRL+++RLAQR GLEH + +        E S  R + LFK PQS +PR+LLID    +     +      A AP + + +RS P  G  GG        GNG +K         S+ DRE+AY                                    +G       G      QA G D   GFG G G   +  +     +   +S ++R    D  +                         W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   55 ADDGGNYPQFSSA-PVGPATASAHGPLDPVLVAGLENARERMTLLKFEDQIVRFLR-NPREPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYENSSARVVTLFKTPQSAVPRVLLIDLSADRQPPTVT-----PASAPRIMMRKRSAPRPGANGG-------RGNGADK------TTPSLQDRERAYAEARARIFGKDNGSTAAESVSSLSPSLTTSSAHESTAGVLSTSNNGARLGSRQAAGLDGSRGFGRGCGVVASGANVRGSQARESRSPKERPSGNDSNE-----------YERSSHPSAPNTASWKESKVLWRNREQEMNDPDFTRNHDAFRPR 367
[Close]
BLAST of NO17G01790 vs. NCBI_GenBank
Match: XP_024584306.1 (mRNA-binding protein Encore [Plasmopara halstedii] >CEG47937.1 mRNA-binding protein Encore [Plasmopara halstedii])

HSP 1 Score: 108.6 bits (270), Expect = 6.200e-20
Identity = 108/344 (31.40%), Postives = 147/344 (42.73%), Query Frame = 0 
Query:   40 GGVGDGLSSAGTVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLLELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAPQSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGGRNILQCNGNGEEKFPSTANGCKSMTDREKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP----LSGGGLKGGKGVQATGPDTLGGFGAGRGKFMAALSGDRRSSTPPQSSEQRQWLEDGQKRSGXXXXXXXXXXXXXXXXXXXXXXWSESKVLWRNREAEKSDPDFLRHP---RPR 377
            G     L+++  V   +A     +DPVL   +E+ RER+ +L++ED +V+F++   K+  L   P SSYHRL+++RLAQR GLEH + +        + S  R + LFK PQS +P +LLID      ++D        A AP + + + S P  G  GG        GN  +K         S+ DRE+AY                                       L   G + G   QA GPD  G  G GRGK     SG+   S  P+S + R    D    S                       W ESKVLWRNRE E +DPDF R+    RPR
Sbjct:   77 GNYAQQLNASAPVGTATASAHGPLDPVLVAGLENARERMTLLQFEDQIVRFLR-NPKEPHLNFPPLSSYHRLIVHRLAQRCGLEHQTADYN----PYDNSSARVVTLFKTPQSAVPLVLLIDL-----SSDRQAPTSTPASAPRIMMRKCSAPRPGVNGG-------RGNSADK------ATPSLQDRERAYAEARARIFGEEDNSTAAEIVILPSPTISLVQDDSKNDDGLGNAGPRHGCR-QAVGPD--GSKGFGRGKETIYSSGNTTGSR-PRSPKARPGGNDSTVHS-----------RSSIPSAPNAANWKESKVLWRNREQEMNDPDFTRNHDAFRPR 382
The following BLAST results are available for this feature:
BLAST of NO17G01790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24250.19.200e-7251.71SUZ domain protein [Nannochloropsis gaditana][more]
ETO62834.11.000e-2241.11hypothetical protein F444_19335 [Phytophthora para... [more]
XP_002907617.13.900e-2232.14conserved hypothetical protein [Phytophthora infes... [more]
ETI34029.16.700e-2240.36hypothetical protein F443_19386 [Phytophthora para... [more]
XP_008897272.16.700e-2240.36hypothetical protein PPTG_05475 [Phytophthora para... [more]
ETP32071.16.700e-2240.36hypothetical protein F442_19157 [Phytophthora para... [more]
KUF95547.16.700e-2240.36Transient receptor potential channel pyrexia [Phyt... [more]
ETL81068.11.900e-2140.36hypothetical protein L917_18532 [Phytophthora para... [more]
OWZ20604.12.800e-2030.75hypothetical protein PHMEG_0004960 [Phytophthora m... [more]
XP_024584306.16.200e-2031.40mRNA-binding protein Encore [Plasmopara halstedii]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002962NSK002962Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01790.1NO17G01790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|654270gene_7713Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100020g22gene6237Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01790.1NO17G01790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01790 ID=NO17G01790|Name=NO17G01790|organism=Nannochloropsis oceanica|type=gene|length=4904bp
TTTCCTTATCTTAATTACTTGTTTCTTCAGTGTTAGCTGGCGTGAGAGGC
CCGTTTTTGGATTTTTCTGCAGCCATCATGTCTCATTGAGGTCCTTCACA
TATGCACAATGCGTTCTTTAGATTCCGTTTGTGGCATCCCGTCATTTTCC
CTTCTCAATATGCAGAGCTAATTGCCATCAAATGTCTTGACCTAGTGTGC
CTCTTGGCTATCCGTCCCTCCCTCTCCACAAGGCTCACTCTCTGTTCTGT
CGTCCTTTAGTCGCCAGCTCAGGTCAGAGATACGCAGGTTCTAGGTGCTG
GCAATCTCCCACTCCGCACAGACATTCTGCATATTCTCCAACAAAATATG
GGGGAAATGCTCCGAGGCCATCGTTGACGATACGTAGATCTCACTCAAAT
CCTCGGGCACCGCCCACACTGGGGTGTAGAATTGCTTGGTCCCTCCTCCG
CCACACATCCAGCCCTCCCGTGGCATCTTATGAGACTTAACAAAATGGAT
AATCTGCCCGGGGGGCACCATCCTCACTTGAGCCATCCGTCGATCGACTT
GTCGCATTTGCTCTTCATACGCTCGCAGCTGCGTCAAGAAATCCGAGGGC
GGGACTTCCTGCGAGGGGTACAGCAATCGTTCCACGGCGGCTCGTGAGTC
CTTATCCATCACGCTCCGCAGCACCGTATTCTTATTGGCCCGGCAACGGG
CAAGGAGACGGAGGATGTCGTCCCGAAGTCCGCGGACAGCATCAAGTGTC
AGACGCGGCACCAAGTCACGACCCAAGACGAAGGTGAGCGTAAAAGGCTT
GGTATACTCGGCCAACCGCTGAGACAAAAGTCCGCCAGGTGTACAATAAG
CAAGGCAACGAAGGTCAGGAAAATCGCGTTGGAGCATAAGCGAAAGGAAG
ACGGCGGCGCCCGCCCCCAGAGAATGGCCCACGATCCGCAGCCTATACCC
CTTGCTCGACTTGGTCAAAGGCGTGTGCGGGCTCGCTGGAGGGGAATCCG
ATCGGTCCCGTTGGATGAGGCGGTGCAGAATCTGGTGCTTGTACAAGTCT
TTGGCAATGCAATCAGCCGCATTCGCCATACCTACGTGCCCGTGCTCTCC
TTCCCCCGGGAAGCCCCACGCCTGCCCCATGGCGTCCAGCGGCCCGGGCT
CGGCGTGGGCATCGTTCAAGAGATCCTCCAAGGACAAGGTCCCACGGATG
GCCACCACCACACACTGCCATTTGTGATCAACAAAAATCGCGTACGGCCG
CTCGTATAGAGTGTTGATGAAGGTGGCATAAGCCAACTCACAGCCTTCCC
GACCCTTCAGCCACTCCCACAGGCCTGCCTCATGGGCGCGAAACCAGTTG
TCGCCCAGCACTGCCCCGATGTCCCCGTGCACATTCGATCGTGTCCCATG
CGGCATCCGAAATAGCCGTCGGGCCCCAAGGGCGGGGAAAGCGTAGCAGG
GGGTCTTGGCGTAGGCGTACATCATCCAGGTATACAAGGCAAGGGCGTAG
GCCTCGAAGTGCGTCCCCTCCTCCAGCACGTTCCGATCTTCAGGGTCTTC
CCGCGACAAGGCATTCTTCACCAAGTAGTGGCCGCATTGAAAGCGGATCC
GTGGGTTCATCCCCGGGCCGGTGGACGTCCCTGACGCTCCTGTTCCGGAC
ATGGTCGTCGTGGCAGTTTCAGCAGCAGCTGCAGCTGTGCCTCCCTCCTC
CAGCTGCTGCATCAACACGCGCTCCTCTGCGTCCAAAAGCTCGGAGTCAC
GTCTTGAGACCATCTCATGCTCCTGCGCCTTCTGGACGTGCCGTAATAGG
ACAAATCCTGCCAAAATGTCCGACGGCAAGACGTCTAGAAACCCCTCTGA
GTGGAACAGGTCGGCCATGACCCGCGCCACCACCTCCATATCCCCCATGT
TCCCCGCTTCTGGTCCCGAGGCCGCCCCGCTCGACAGAAGGTGGCACGTC
GTATACCTAAGGCAGGTACACAGGAAGCTGCAACGACCCCGCCATCGATC
CTCGGCGATGGAATAGGAGACGAGGGACTCATGGTGTTCGAAGTGTCGCA
AGGGGTGCTCCTGCTCCTCGCCCACCGGCTGCCCAACCAGCATGGCGCAG
CAGCAGGCCTTCATCGACACGTCGGCCAATTGCGAAATGGCAATCAGGGC
CACGATCAAGTCCACCCGGTTCTGCAAGGTCATGGAATCACACATAACCA
GATGCTTGGGGTCGGAGAGGATGGCCAGGCCCAGCATCGCAACAATCAAC
TGTACGCCCCCCATGCACGTATGCACCACCACCAGCAGACCCACGGCTTT
GCGAGACTGGGTGTGAACGATAGATCCGCGCTGTGAGGCCGCCACGATGG
CCAGCTCCACCAGTACCATGACCAAGAAGAGTATAATGGAAATTCCGACA
AAGCTGTCGACGACGCCGGGCCGGGAGCATGACTCCAGCAAGTACTGCAG
GTGCATGAACAAGCCTAGCACTACGGCTGACCACACCAGCCGCCCCAACG
CCATGCAAAACGCCGGAACCGTCATGGCGTCACTGGCAATATGGTAGTGC
CGTCCCAGGAGCTGCATGCGCGGCATGGTTGCCGTGCGTGAAGGGATGTT
GACGGGGCGGCCTCGGAGTCTTGGCAGGGGTCGGAGCACGTTTTTGGTAC
ACTTCTGCAGTAGCAGCCTCTTTTGCAAAAACAGGGGCTCTAAAGCAGGG
TCGATCCCCCTTTGCCTCCCCTGTCGCGTGTGGTGTGAGATGTACACAGT
TGCTTCAGAGCTTGATAAGGCGATTGTCTGATCGAACTCGGAAACAGCGA
GCCACCCCCCCATCTCCCATCATCTTAGAAAGCTAGACGCCCTTGCCCCT
CCCTCCCTGCTCCTGTCTATGTCTACATGAGGTCTCTGTTGATAACTTCC
ACCTAAATTTTCTCGTGTCGGTGTGGCCAGGTTTGCCGCATACATGGGAA
TGCACGGTCCGCCCAGAGAGGAGCGAGGAAGCTTCTCCTCCATCGCCCGC
GCTCACGACACACACCACCATCATTCGTCCACAACACAACACAGGCACAC
CGCGCAGTAATGGCGGACGAGGACGATTGGGGGCCGGCTCCTTTGCCTGA
CTTTAATAGACTCCATTTAGGGGGCCGGgtaagaagtggcgagggacgga
gggatggaggagaggaggagaatgtagatatgtacgattcccaatgcctc
gagaagcgctacatcctcgttcaactttattcacaccactgtaaaagGAT
GCGCCTGCGACGAGTGGCAGCACAGCAGCGTCGGAAGCGGAAGTGGGCGG
GGTGGGTGACGGTTTGTCCTCGGCGGGCACAGTGGCAGTCACGTCGGCAG
AAGACGACGCGGCGATCGATCCAGTCCTGACGGGAGCTATGGAGAGCCCT
CGGGAACGCGTGAATGTGCTAAAATACGAGGATGCTATGGTACAGTTCAT
GAAGGCCGGGACTAAGCAGCAGTTGCTGGAATTGTCCCCTAGCTCGTCTT
ACCACCGCCTTCTGCTCTACCGCCTCGCCCAGCGCTTTGGCCTGGAGCAC
GCTTCCGGGGAAGCCGAGGGTGGTGGCGTAGGGATGGAACCCAGCATGAA
CCGGACCCTCGTGCTTTTCAAGGCACCGCAAAGCTTTATGCCCCGCCTTC
TACTGATTGACACGTGCGGAAAGAAAGGCACGAATGATGCAAGTGGGGGG
AGGGACGGAGGTGCCAAGGCCCCCGTGATGAGGCTGATGCGACGGAGTCG
GCCGGCCGAGGGCAAGCAGGGAGGAGGCAGAAACATATTACAATGTAACG
GTAATGGTGAGGAAAAATTCCCATCCACGGCCAATGGATGCAAGAGTATG
ACAGACAGGGAGAAGGCGTACGCCGAGGCACGAGCTCGCATTTTTGGTGC
CCCATCTGAGTCTGCATCATCCTCGTCCACCTCTACCAGCAGCGCAGTCA
GCATCTCCTCCTCCTCCTCGTGTCCTCTCTCAGGTGGGGGCTTGAAAGGC
GGCAAGGGCGTGCAAGCAACTGGACCTGATACCTTGGGTGGATTTGGAGC
CGGGCGGGGCAAGTTCATGGCGGCGCTGTCGGGAGACCGTCGGTCGAGCA
CTCCACCTCAATCCTCCGAGCAGCGGCAGTGGCTTGAGGATGGGCAGAAA
AGAAGCGGCAGGGGTGGAGGGGGCGAGGGGGACGGGGACGGGGGAGAAGG
AGGAGGAGGTGGCGCGAAAGGGGAATGGAGCGAGAGCAAGGTGCTGTGGC
GGAACCGCGAGGCCGAAAAGAGCGACCCGGATTTTCTCCGGCATCCTCGT
CCGCGCGGGTTGCCACCTGGTGGAGGGATGATGTGCGCGTTCTCAAGAGG
GGGAGGAGGGGGAGGAGGGGGAATGTACGGTACCATGTCTGGTCCTCCTC
CAGCCTTCAACAGCTTACCTCCCCCTCCAGGTGCTCCTCCCGGCGCCTTC
TACGTGGACCATTACATGCAGCAACAGGTGATGCAGCAGCATATGGCCGC
CATATATCACCACCATCACTACCACCATCAGCAACAGCAGCAGTACCACC
CGCACCACCAGCAGGCGCCGTTTCCGTCTTCATCGATTTTTCCGCAAGGT
TACTACAACGATCCACGGTATGCCTCGTATTCTTACCAAGGAGGGGGAGA
AGGAGATGGGCCAGAAAGAGGTGGAGGAATCGAAGAACGGGGGATGTGGG
GGCGGGGAAGAGGGATGGGAAGAGGTGGAATTTTTGTGGGGAGGCCATTG
CCGTCGTCCCACTCGAGAGGAGGAAGCTCTGGGAACGACACTGACCAGAG
ATGTGTGGAGGAGGACTTTCCGCCGTTAGGTAGATAGGTAGAGCATATGA
AACAGAGGGTATATGCTCAAAGGAACGAAAAACGAAACACGCAATAACTG
AAGG
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protein sequence of NO17G01790.1

>NO17G01790.1-protein ID=NO17G01790.1-protein|Name=NO17G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=553bp
MADEDDWGPAPLPDFNRLHLGGRDAPATSGSTAASEAEVGGVGDGLSSAG
TVAVTSAEDDAAIDPVLTGAMESPRERVNVLKYEDAMVQFMKAGTKQQLL
ELSPSSSYHRLLLYRLAQRFGLEHASGEAEGGGVGMEPSMNRTLVLFKAP
QSFMPRLLLIDTCGKKGTNDASGGRDGGAKAPVMRLMRRSRPAEGKQGGG
RNILQCNGNGEEKFPSTANGCKSMTDREKAYAEARARIFGAPSESASSSS
TSTSSAVSISSSSSCPLSGGGLKGGKGVQATGPDTLGGFGAGRGKFMAAL
SGDRRSSTPPQSSEQRQWLEDGQKRSGRGGGGEGDGDGGEGGGGGAKGEW
SESKVLWRNREAEKSDPDFLRHPRPRGLPPGGGMMCAFSRGGGGGGGGMY
GTMSGPPPAFNSLPPPPGAPPGAFYVDHYMQQQVMQQHMAAIYHHHHYHH
QQQQQYHPHHQQAPFPSSSIFPQGYYNDPRYASYSYQGGGEGDGPERGGG
IEERGMWGRGRGMGRGGIFVGRPLPSSHSRGGSSGNDTDQRCVEEDFPPL
GR*
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Synonyms
Publications