NO17G01780, NO17G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01780 vs. NCBI_GenBank
Match: EWM24287.1 (rmd5 like protein [Nannochloropsis gaditana]) HSP 1 Score: 531.2 bits (1367), Expect = 3.000e-147 Identity = 283/433 (65.36%), Postives = 332/433 (76.67%), Query Frame = 0 Query: 1 MCDSLLADWARLRDKQRQNTEVTLRLVDRVSVAVEEVATATASTTSRGPPSPTSLDDVIPQLVQQHKTYHAALSKFIKAVDRIFLEAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGRLDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNSTGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMK----GGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 MCDSLL + RLR+KQRQNTE+ LRLV+ V A+E+ + TT + P S SL+D++PQLVQQHKTYHAALSK K+VDR+FL+A PPV MCRP D L+D+MV HLYR GRT TA KLV+EAGL S+AL +AHEALARVH+VI AA ++R+LGPA WAAEH EGL+ +GSNLEF+LARLQF+ L+ D ++ K E EDAK+EEEE E +DD+A++FAR+HLAPFAV GGG+ E+VR LMG LLYAGRLDRSPY+ L+P LW +AMEALHTEGCR+LGLPVES LSVCYRASL A+GPLAKMRQVV NS GDWE LEELPG I+ G SLRFHSVFSCPVTREQAS ANPPM+LKCGHVICR+SL RL+K GG G H RFKCF+CPVEQ QDAQQ+YF Sbjct: 1 MCDSLLTELTRLREKQRQNTEIMLRLVNSVGAALED--SLGEPTTPQVPHS--SLEDIMPQLVQQHKTYHAALSKMTKSVDRVFLDATPPVFMCRPLRKEDRGLVDQMVGQHLYRRGRTRTAVKLVQEAGLCSSALNLQAHEALARVHEVIAAASKKRDLGPARAWAAEHREGLKHVGSNLEFKLARLQFVKLVAGD---GSQGKRAE----EDAKEEEEETPLGCEGEASTHQDDLAISFAREHLAPFAVEGGGNAEEVRKLMGSLLYAGRLDRSPYKRYLAPRLWADAMEALHTEGCRMLGLPVESSLSVCYRASLHAMGPLAKMRQVVLNSKGDWEALEELPGGIEWGRDSSLRFHSVFSCPVTREQASRANPPMVLKCGHVICRNSLNRLLKPQTAGGRASQGQH---RFKCFICPVEQTLQDAQQIYF 419
BLAST of NO17G01780 vs. NCBI_GenBank
Match: XP_011149860.1 (PREDICTED: protein RMD5 homolog A isoform X1 [Harpegnathos saltator]) HSP 1 Score: 221.9 bits (564), Expect = 3.900e-54 Identity = 144/384 (37.50%), Postives = 199/384 (51.82%), Query Frame = 0 Query: 53 TSLDDVIPQLVQQHKTYHAALSKFIKAVDRIFL----EAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGR-LDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNS--TGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 T + D + +L H+ H+ +SK KA+DR F+ V C P + L+++++ H YR+G A +L EAG+ + R E L I +++R L PA WA +H E L S+LEF+L RLQF + L + C K+TE A+ +ARQ+L F G H ++V++LMG LLY + SPY LL+P LW E + E C LLGL V+SPLSVC A AL L ++QV+Q TG W G +ELP EIDLG + R+HSVF+CP+ R+Q++ +NPPM L CGHVI R +L +L N R KC CPVEQ P+DA+ +YF Sbjct: 65 TKVRDTVIKLATDHRDLHSTVSKVGKAIDRNFIADFASTSREDVFCGPEKS---HLLNQVICQHFYRQGMLDIADELAAEAGIKTDEGRKEPFTEL----NFILDCLKQRNLEPALEWAKKHREALMAQNSSLEFKLHRLQF-IRLVQQGPC----KQTE-----------------------------AILYARQNLTRFV---GRHEKEVQSLMGTLLYLPHGIQSSPYSHLLNPTLWLEIHDVFTREACMLLGLSVDSPLSVCINAGCTALPALLNIKQVMQQRQVTGIWNGKDELPIEIDLGKQG--RYHSVFACPILRQQSTESNPPMKLVCGHVISRDALNKLTNA----NKNQFVSRLKCPYCPVEQNPEDARLIYF 398
BLAST of NO17G01780 vs. NCBI_GenBank
Match: XP_011149939.1 (PREDICTED: protein RMD5 homolog A isoform X2 [Harpegnathos saltator] >EFN90030.1 Protein RMD5-like protein A [Harpegnathos saltator]) HSP 1 Score: 219.2 bits (557), Expect = 2.500e-53 Identity = 142/384 (36.98%), Postives = 198/384 (51.56%), Query Frame = 0 Query: 53 TSLDDVIPQLVQQHKTYHAALSKFIKAVDRIFL----EAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGR-LDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNS--TGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 T + D + +L H+ H+ +SK KA+DR F+ V C P + L+++++ H YR+G A +L EAG+ + R E L I +++R L PA WA +H E L S+LEF+L RLQF + L + C K+TE A+ +ARQ+L F G H ++V++LMG LLY + SPY LL+P LW E + E C LLGL V+SPLSVC A AL L ++QV+Q TG W G +ELP EIDLG + R+HSVF+CP+ R+Q++ +NPPM L CGHVI R +L +L + KC CPVEQ P+DA+ +YF Sbjct: 65 TKVRDTVIKLATDHRDLHSTVSKVGKAIDRNFIADFASTSREDVFCGPEKS---HLLNQVICQHFYRQGMLDIADELAAEAGIKTDEGRKEPFTEL----NFILDCLKQRNLEPALEWAKKHREALMAQNSSLEFKLHRLQF-IRLVQQGPC----KQTE-----------------------------AILYARQNLTRFV---GRHEKEVQSLMGTLLYLPHGIQSSPYSHLLNPTLWLEIHDVFTREACMLLGLSVDSPLSVCINAGCTALPALLNIKQVMQQRQVTGIWNGKDELPIEIDLGKQG--RYHSVFACPILRQQSTESNPPMKLVCGHVISRDALNKLTNA----------NKLKCPYCPVEQNPEDARLIYF 392
BLAST of NO17G01780 vs. NCBI_GenBank
Match: XP_014482125.1 (PREDICTED: protein RMD5 homolog A isoform X2 [Dinoponera quadriceps]) HSP 1 Score: 219.2 bits (557), Expect = 2.500e-53 Identity = 143/384 (37.24%), Postives = 197/384 (51.30%), Query Frame = 0 Query: 53 TSLDDVIPQLVQQHKTYHAALSKFIKAVDRIFL----EAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGR-LDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNS--TGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 T + D + +L H+ H+ +SK KA+DR F+ V C P + L+++++ H YR+G A +L EAG+ + R E L I +++R L PA WA +H E L S+LEF+L RL F + L + C K+TE A+ +ARQ+L F G H ++V++LMG LLY + SPY LL P LW E + E C LLGL V+SPLSVC A AL L ++QV+Q TG W G +ELP EIDLG + R+HSVF+CP+ R+Q++ +NPPM L CGHVI R +L +L N R KC CPVEQ P+DA+ +YF Sbjct: 65 TKVRDTVIKLATDHRDLHSTVSKVGKAIDRNFIADFASTSREDVFCGPEKS---HLLNQVICQHFYRQGMLDIADELAAEAGIKTDEGRKEPFTEL----NFILDCLKQRNLEPALEWAKKHREALLAQSSSLEFKLHRLHF-IRLVQQGPC----KQTE-----------------------------AILYARQNLTQFV---GRHEKEVQSLMGTLLYLPHGIQSSPYSHLLDPTLWLEIHDVFTKEACMLLGLSVDSPLSVCINAGCTALPALLNIKQVMQQRQVTGIWSGKDELPIEIDLGKQG--RYHSVFACPILRQQSTESNPPMKLVCGHVISRDALNKLTSA----NKNQFVSRLKCPYCPVEQNPEDARLIYF 398
BLAST of NO17G01780 vs. NCBI_GenBank
Match: XP_004348076.1 (hypothetical protein CAOG_04251 [Capsaspora owczarzaki ATCC 30864] >KJE93463.1 hypothetical protein CAOG_004251 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 217.2 bits (552), Expect = 9.700e-53 Identity = 136/379 (35.88%), Postives = 196/379 (51.72%), Query Frame = 0 Query: 54 SLDDVIPQLVQQHKTYHAALSKFIKAVDRIFLEAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGRLDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQN---STGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 S+ + ++ ++H+ HA +S+F K +D+ F+ L++E++A HL R+G A + E+GL+ + + I A ++++L PA RWA+E+ + L+R+GS+LEF+L +L+FL L D RD AL +AR PF+ H+ +V+ LMGCLLY GR +PY +L+ W E A + C +LG+ +SPL V + A AL L KM V+Q S+ W +ELP EI+LG +FHSVF+CPV+REQAS NPPMM+KCGHV+C+ SL RL K NGG RFKC CPVEQ P DA ++F Sbjct: 93 SVKEACDKVTEEHRDMHATVSRFGKTIDKAFVTDIDKFANPAAFEGAQAALLNEVIAKHLLRQGHFAAAETFIRESGLTLEQPQLGPFIEMYN----IMEAFKQQDLAPALRWASENRQALERIGSSLEFKLHKLEFLRRLQIDR-----------------------------------RD--ALQYARVQFVPFS---HSHLNEVQRLMGCLLYYGRAPPTPYMELVDSIHWTEIAHAFTRDCCAMLGMTYDSPLFVSFLAGCAALPTLLKMASVMQGRGASSTLWTSKDELPVEIELG--KDSQFHSVFACPVSREQASPENPPMMMKCGHVVCKLSLERLSK-----NGG----RFKCPYCPVEQTPADAHIVHF 416
BLAST of NO17G01780 vs. NCBI_GenBank
Match: XP_014482124.1 (PREDICTED: protein RMD5 homolog A isoform X1 [Dinoponera quadriceps]) HSP 1 Score: 216.5 bits (550), Expect = 1.600e-52 Identity = 141/384 (36.72%), Postives = 196/384 (51.04%), Query Frame = 0 Query: 53 TSLDDVIPQLVQQHKTYHAALSKFIKAVDRIFL----EAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGR-LDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNS--TGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 T + D + +L H+ H+ +SK KA+DR F+ V C P + L+++++ H YR+G A +L EAG+ + R E L I +++R L PA WA +H E L S+LEF+L RL F + L + C K+TE A+ +ARQ+L F G H ++V++LMG LLY + SPY LL P LW E + E C LLGL V+SPLSVC A AL L ++QV+Q TG W G +ELP EIDLG + R+HSVF+CP+ R+Q++ +NPPM L CGHVI R +L +L + KC CPVEQ P+DA+ +YF Sbjct: 65 TKVRDTVIKLATDHRDLHSTVSKVGKAIDRNFIADFASTSREDVFCGPEKS---HLLNQVICQHFYRQGMLDIADELAAEAGIKTDEGRKEPFTEL----NFILDCLKQRNLEPALEWAKKHREALLAQSSSLEFKLHRLHF-IRLVQQGPC----KQTE-----------------------------AILYARQNLTQFV---GRHEKEVQSLMGTLLYLPHGIQSSPYSHLLDPTLWLEIHDVFTKEACMLLGLSVDSPLSVCINAGCTALPALLNIKQVMQQRQVTGIWSGKDELPIEIDLGKQG--RYHSVFACPILRQQSTESNPPMKLVCGHVISRDALNKLTSA----------NKLKCPYCPVEQNPEDARLIYF 392
BLAST of NO17G01780 vs. NCBI_GenBank
Match: NP_001149153.2 (uncharacterized LOC100282775 [Zea mays] >XP_008676793.1 uncharacterized LOC100282775 isoform X1 [Zea mays] >XP_008676800.1 uncharacterized LOC100282775 isoform X1 [Zea mays] >XP_008676805.1 uncharacterized LOC100282775 isoform X1 [Zea mays] >XP_008676809.1 uncharacterized LOC100282775 isoform X1 [Zea mays] >ACR34292.1 unknown [Zea mays] >ONM05412.1 LisH/CRA/RING-U-box domains-containing protein [Zea mays]) HSP 1 Score: 216.1 bits (549), Expect = 2.200e-52 Identity = 149/440 (33.86%), Postives = 220/440 (50.00%), Query Frame = 0 Query: 3 DSLLADWARLRDKQRQNTEVTLRLVDRVSVAVEEVATA-----TASTTSRGPPS-----PTSLDDVIP--QLVQQHKTYHAALSKFIKAVDRIFLEAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAG-LSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGRLDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNSTGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 DSL + R+ +K+ ++ L +VD++ +E+ T ST + PS L+++ P QL K + ALSK++K +++ F P + +V + ++ ++A H YR+G V E G L A+L+ E A I A++ R L PA WAA++H+ L + GS LEF+L +LQF+ +L SK RG + D AL +AR HL PFA H E+ + LM CLL+ GRLD+SPY +L+S WE+ E L + C LLG ESPLSV A + L L K+ QV+ +W+ +++LP ID+G P ++HSVF CPV REQ+S NPPM + CGHV+ + S+ +L K + FKC CP E +QL+F Sbjct: 4 DSLREGFDRVAEKRSLSSAKALEVVDQIVNEIEQAIVKLQMMNTDSTGNVDHPSILAELKAKLNEMAPLNQLEGSQKELNVALSKYLKLLEKSF---NPDISKAYRNVDFEVHTVNNIIANHFYRQGLFDLGDMFVHECGELGGASLKLPFQEMYA-----ILEAMKARNLEPALSWAAKNHDQLLQNGSMLEFKLYQLQFVEIL-----------------------------SKGSRGEAK---DEALLYARTHLVPFAAV---HKEEFQKLMACLLWVGRLDQSPYSELMSSAHWEKLAEELTHQFCSLLGQSRESPLSVAVSAGFQGLPTLLKLTQVMAAKKQEWQVMKQLPVPIDIG--PEFQYHSVFVCPVLREQSSDENPPMRMPCGHVVSKQSIMKLSKSS--------SRAFKCPYCPSEAMASHCKQLHF 390
BLAST of NO17G01780 vs. NCBI_GenBank
Match: ACG34392.1 (protein UNQ2508/PRO5996 [Zea mays]) HSP 1 Score: 215.3 bits (547), Expect = 3.700e-52 Identity = 149/440 (33.86%), Postives = 219/440 (49.77%), Query Frame = 0 Query: 3 DSLLADWARLRDKQRQNTEVTLRLVDRVSVAVEEVATA-----TASTTSRGPPS-----PTSLDDVIP--QLVQQHKTYHAALSKFIKAVDRIFLEAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAG-LSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGRLDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNSTGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 DSL + R+ +K+ ++ L VD++ +E+ T ST + PS L+++ P QL K + ALSK++K +++ F P + +V + ++ ++A H YR+G V E G L A+L+ E A I A++ R L PA WAA++H+ L + GS LEF+L +LQF+ +L SK RG + D AL +AR HL PFA H E+ + LM CLL+ GRLD+SPY +L+S WE+ E L + C LLG ESPLSV A + L L K+ QV+ +W+ +++LP ID+G P ++HSVF CPV REQ+S NPPM + CGHV+ + S+ +L K + FKC CP E +QL+F Sbjct: 4 DSLREGFDRVAEKRSLSSAKALEAVDQIVNEIEQAIVKLQMMNTDSTGNVDHPSILAELKAKLNEMAPLNQLEGSQKELNVALSKYLKLLEKSF---NPDISKAYRNVDFEVHTVNNIIANHFYRQGLFDLGDMFVHECGELGGASLKLPFQEMYA-----ILEAMKARNLEPALSWAAKNHDQLLQNGSMLEFKLYQLQFVEIL-----------------------------SKGSRGEAK---DEALLYARTHLVPFAAV---HKEEFQKLMACLLWVGRLDQSPYSELMSSAHWEKLAEELTHQFCSLLGQSRESPLSVAVSAGFQGLPTLLKLTQVMAAKKQEWQVMKQLPVPIDIG--PEFQYHSVFVCPVLREQSSDENPPMRMPCGHVVSKQSIMKLSKSS--------SRAFKCPYCPSEAMASHCKQLHF 390
BLAST of NO17G01780 vs. NCBI_GenBank
Match: XP_009368335.1 (PREDICTED: protein RMD5 homolog A-like [Pyrus x bretschneideri] >XP_009368337.1 PREDICTED: protein RMD5 homolog A-like [Pyrus x bretschneideri] >XP_009368338.1 PREDICTED: protein RMD5 homolog A-like [Pyrus x bretschneideri] >XP_018505531.1 PREDICTED: protein RMD5 homolog A-like [Pyrus x bretschneideri] >XP_018505532.1 PREDICTED: protein RMD5 homolog A-like [Pyrus x bretschneideri]) HSP 1 Score: 214.5 bits (545), Expect = 6.300e-52 Identity = 125/371 (33.69%), Postives = 187/371 (50.40%), Query Frame = 0 Query: 59 IPQLVQQHKTYHAALSKFIKAVDRIFLEAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGRLDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNSTGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 IPQL HK +LSK+ K ++R + V D ++++M+A H YREG +++EAG + + +H+++ A++ + L PA W + + E L ++GSNLE +L LQFL +L + N+ + AL +AR L+PFA H ++V LMGCL+YAGRLD SPY ++ SP WE++ME L + C LLG SPLS+ A L L K+ V+ +W+ +++LP +DLG +FHS+F CPV+R+Q S NPPM++ C HV+C+ S+ +L K G + FKC CP E +QLYF Sbjct: 71 IPQLEGSHKELVVSLSKYTKLLER---SLNSDISKAYRYVDFDHHIVNQMIANHFYREGSFNLGDGIIDEAGEPESTI---LKSQFMELHQIV-EAMKVKNLEPALNWVSANREKLNQIGSNLEVKLHSLQFLEILQKGNLAS------------------------------------ALQYARTCLSPFASPPSPHKDEVVKLMGCLIYAGRLDSSPYSEITSPTHWEKSMEDLTRQFCSLLGQSYNSPLSMTMAAGFEGLPTLLKLANVMAARKQEWQAMKQLPVPLDLG--KEFQFHSIFVCPVSRDQGSQENPPMLMPCLHVLCKQSILKLSKSG--------TRTFKCPYCPAEASVAQCRQLYF 388
BLAST of NO17G01780 vs. NCBI_GenBank
Match: PIN16463.1 (putative E3 ubiquitin ligase [Handroanthus impetiginosus]) HSP 1 Score: 214.5 bits (545), Expect = 6.300e-52 Identity = 143/430 (33.26%), Postives = 212/430 (49.30%), Query Frame = 0 Query: 11 RLRDKQRQNTEVTLRLVDRVSVAVEEVATATASTTSRGPPS---------PTSLDDVIP--QLVQQHKTYHAALSKFIKAVDRIFLEAKPPVVMCRPSVTLDPRLIDEMVALHLYREGRTCTAAKLVEEAGLSSAALRFEAHEALARVHKVITAAIERRELGPACRWAAEHHEGLQRLGSNLEFQLARLQFLVLLTRDNVCNARWKETEVVKMEDAKDEEEEGKSKHERGRKRIRDDVALTFARQHLAPFAVAGGGHMEQVRTLMGCLLYAGRLDRSPYQDLLSPELWEEAMEALHTEGCRLLGLPVESPLSVCYRASLRALGPLAKMRQVVQNSTGDWEGLEELPGEIDLGGKPSLRFHSVFSCPVTREQASWANPPMMLKCGHVICRSSLARLMKGGHGHNGGHPQQRFKCFVCPVEQYPQDAQQLYF 430 R+ KQ+ + + +++++ +E+ + S PS L ++ P QL K + ALSK+ K +++ F P + ++ D +++++A H YREGR V+E AAL + I A++ R L PA WAA +HE L + GS++E +L RLQF+ +L RGR D AL +AR LAPFA HM +++ LM CLL+AGRLD SPY +LLS W++ E L E C L+G ESPLSV A ++ L L K+ V+ +W+ +++LP +DL + +FHS+F CPV+R+QAS NPPM+L CGHV+C+ S+ +L K +N P FKC CP E +QLYF Sbjct: 12 RVTKKQKLSCSKSQEVIEQIGQEIEQALSRIQSGQDSASPSDHKLILNELKAKLKEIAPLSQLESTQKELNVALSKYPKLLEKSF---NPDISKAYRNIDFDIHAVNQIIANHFYREGRFDLGDCFVDETKEPEAALMKSPFVEMFH----ILEAMKSRNLEPALNWAANNHEQLTQNGSDIELKLHRLQFVEIL-------------------------------QNRGR-----DEALKYARAFLAPFATK---HMAEIQKLMACLLWAGRLDSSPYAELLSSIHWDKLAEELTREFCNLIGQSYESPLSVTIAAGVQGLPTLLKLMNVMTGKKHEWQSMKQLPVPVDLDRE--FQFHSIFVCPVSRDQASEENPPMLLSCGHVLCKQSITKLSK----NNSTRP---FKCPYCPSEVEAGQCRQLYF 386 The following BLAST results are available for this feature:
BLAST of NO17G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01780 ID=NO17G01780|Name=NO17G01780|organism=Nannochloropsis oceanica|type=gene|length=1290bpback to top protein sequence of NO17G01780.1 >NO17G01780.1-protein ID=NO17G01780.1-protein|Name=NO17G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bpback to top Synonyms
Publications
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