NO17G01560, NO17G01560 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01560
Unique Name	NO17G01560
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3311
Alignment location	chr17:458809..462119 -

Link to JBrowse

Properties


Property Name	Value
Description	Beta-adaptin-like protein a

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:458809..462119 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0030131	clathrin adaptor complex
GO:0030117	membrane coat
GO:0016020	membrane
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0016192	vesicle-mediated transport
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR026739	AP_beta
IPR015151	B-adaptin_app_sub_C
IPR002553	Clathrin/coatomer_adapt-like_N

Homology

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BLAST of NO17G01560 vs. NCBI_GenBank
Match: EWM24216.1 (beta-adaptin-like protein a [Nannochloropsis gaditana])

HSP 1 Score: 1220.3 bits (3156), Expect = 0.000e+0
Identity = 642/877 (73.20%), Postives = 729/877 (83.12%), Query Frame = 0

Query:    1 MSGPPPQALAPPASSMTGQQPPQQGPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAFRLPSTAGMVLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLLATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVD------YTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPP----SASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEGRIGVGMEGGVEAFVDLISQALYALELI 868
            MS P PQ+     S + GQ   Q    PPAYFVDTKKGEVSELKQLLKTLAVE++PKRKRDVIKKVIAYMTLGIDVSRLFTEMV+AIET DLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYIS PLRR+LTDQSPYVRKTGVMGILKLFHLAP+VAR+ANFVDLLYNMIQDPDPHVV NCLIVL E+LAAEEGGMAVNQPLILHLLGRLGEF+EWGLT +LALVAKY P DEEELF+IMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVY+RVKAPLLTLMAGGNPEVEYCILKHLEA+VHRAPGVFDDEYRQLYVRYNEPTFVKYEKI ILA+IA+ +TV DI++ELAEY+TDVDQEVSRRSIRAIG+IAFRLPS AGMVL+RL+GFLDVD+ S+RPETILVM+D+LRRYPERK+E LP LQ C+RRVD+ PEAQAALIWM GEYGG+ FP+ PYL+EPLID YA ++SA +KL+LLTA MKLF KRPPE QSMLGRLL +ATNDL+SQDVHDRALLYYRLL  DV+AAK+VVL GE      RT IVG FAEER MT+LR+KLFGEFNTLAV+YG+PS+QFVSPSY+ KPAETSLTPF+MG Q  ++GN GNNLLDL ADDSLLP GG E G+E +SP R+GS +      YTGPS DLLDM+                +GV   + + R  TP        +++L L+DSF++ PE FQ LWAELPE  +YNV +  LP +GL  LE +L  RGI CLASGE+ D FKLFLYGQ E G++YL+Q ++ K ++RL +TLK+    +  +G +G+     +    A V+LI+Q L +L L+
Sbjct:    3 MSAPLPQSRQSHPSPLPGQHQQQ---NPPAYFVDTKKGEVSELKQLLKTLAVEKDPKRKRDVIKKVIAYMTLGIDVSRLFTEMVLAIETPDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAKYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYSTDVDQEVSRRSIRAIGNIAFRLPSAAGMVLERLVGFLDVDMNSMRPETILVMRDILRRYPERKAEALPRLQPCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAMKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVL-GEHEMDVNRTTIVGTFAEERDMTSLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPGGGVECGVESESPSRAGSTNPEGSTAYTGPSSDLLDMSD---------------MGVSLAVPTDRITTPSASQQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLTVLPTDGLSTLETSLLSRGIKCLASGEVTDVFKLFLYGQHELGRLYLIQIVIHKLSKRLNLTLKIGRPEMESEGDDGK-----DRSANAVVELITQVLSSLHLL 855

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BLAST of NO17G01560 vs. NCBI_GenBank
Match: CBN76291.1 (Coatomer protein complex, beta sub-unit [Ectocarpus siliculosus])

HSP 1 Score: 711.8 bits (1836), Expect = 2.500e-201
Identity = 400/813 (49.20%), Postives = 526/813 (64.70%), Query Frame = 0

Query:   19 QQPP--QQGPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAFRLPSTAGMVLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLLATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAEN--GNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLK 828
            QQPP  Q  PT  +YFVD KKGE++ELKQLL+ ++V+R+PK+KR+VIKKVIAYMTLGIDVSRLFTEM++AIET+DLVVKKMVYLYLC YA  KPDLA+MC+NTLQRDC+  DPMVRGLALR+LCSLRLP+M+EYIS PL+ SLTD + YVRKTGVM ILK++HL P+       VD LYNM+QD D  VVANC++VL+E++ A+ GGMA N  ++ HLLGRL +F+EWG+ H+LALV+++ P DE+E F IMNL+DPVLRTSNSG VL+ + CFL LT  +PD++ QVY R KAPLLTLMAGG+ E  YCILKHLE ++ R PGVFDDEYRQ + RYNEPT VKY K+  LAL+A   T   +++EL EYA D+D  ++R+++RA+G I  RLP +A   ++RLI  + +D+  V+ E + V++ LLR+YP+ ++EVLPSLQ CL+ + DEP  +AA+IWMVGEYG E   +APY++EPL+D +    S+ +K++LLTA +KLF KRPPE QSMLGRLL  A NDLSSQD+HDRALLY+RLL  D + A++V           R  + G FAE+R  T  R+ +F EFNTL++VY   S  F  P ++ K  + +     + G+   N   + G  L    AD   L                                                             +        + + ++S Q     FQ LWA L      +  +  +PA+    +E  L  RG+  +ASG  P A K F Y +D  G  YL+Q  + K  R LE+ +K
Sbjct:   18 QQPPPSQSNPTGGSYFVDQKKGEINELKQLLRAVSVDRDPKKKREVIKKVIAYMTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDTDAQVVANCVVVLNEIM-ADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSRHEPADEDEAFEIMNLVDPVLRTSNSGAVLAAVNCFLLLTKNMPDMRYQVYERTKAPLLTLMAGGSSETVYCILKHLEGMLPRCPGVFDDEYRQFFTRYNEPTGVKYAKVRCLALLADSTTAEAVIAELGEYAGDMDPLLARQAMRAVGKICLRLPGSAAAAIERLIDLMGMDVSYVKAEAVQVVEVLLRKYPQWRTEVLPSLQRCLKHI-DEPAGKAAVIWMVGEYGDE-ITEAPYMLEPLVDAWEEEPSSQIKMHLLTAAVKLFFKRPPEMQSMLGRLLARAVNDLSSQDLHDRALLYHRLLKHDPEVARRVCCC-------ERPPVSGEFAEDRD-TGRRDVVFSEFNTLSMVYDDHSDNFTLPEFRAKKVKNTRA---IPGEAEANDLADLGLALERSKADQQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVE------FQTGITINSGQ-----FQSLWAALGAGVESSFEMSKVPAS-TQEVEGLLTARGVNTMASGNKPAAMKFFFYAKDVLGSTYLMQCSVLKPERLLELVVK 804

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BLAST of NO17G01560 vs. NCBI_GenBank
Match: ETI47699.1 (hypothetical protein F443_08132 [Phytophthora parasitica P1569])

HSP 1 Score: 663.7 bits (1711), Expect = 7.900e-187
Identity = 391/851 (45.95%), Postives = 518/851 (60.87%), Query Frame = 0

Query:   25 GPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHL--TTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAF-----------------RLPSTAGM-------------VLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEG 841
            G + P YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +L  T  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA                   +P   G              ++  ++ FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   A+ ++ L LL ATMKLF KRPPE QSMLGRLL SA N+ S QDV DRALLYYRLL    T+  AA       EE        IV  FAE    T+L++KLF EFN+LAVVY +PS  FVSP++            L G        A  +                                   PS+DLLDM                      +  S     PP    +S  LV S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ +L + L++KA R L  T+K      GED   G
Sbjct:   38 GSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQVADQLVEQMQXXIMDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTEE--------IVSVFAES-VETDLKDKLFQEFNSLAVVYNKPSELFVSPTH------------LAGAV------APLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPSMDLLDM----------------------DFGSASSGPPPQAAGSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQS--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK------GEDEASG 828

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BLAST of NO17G01560 vs. NCBI_GenBank
Match: XP_024577493.1 (ap-1 complex subunit [Plasmopara halstedii] >CEG41124.1 ap-1 complex subunit [Plasmopara halstedii])

HSP 1 Score: 661.8 bits (1706), Expect = 3.000e-186
Identity = 402/872 (46.10%), Postives = 534/872 (61.24%), Query Frame = 0

Query:    3 GPP-PQALAPPASSMTGQQPPQQGPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHLTTA--VPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAF-----------------RLPSTAGM-------------VLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGG 839
            GPP P ++ PP  +  G Q P  G + P+YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +LT A  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA                   +P   G              +L  ++ FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   AS+++ L LL A MKLF KRPPE QSMLGRLL SA N+ + QDV DRALLYYRLL    TD  AA       EE         V  FAE    T+L +KLF EFN+LAVVY +PS  FVSP++   PA                                         L+ ++     S      S+DLLDM                         S   + PP PP+ +L L+ S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ YL + L++KA R    T+K    GV E  G
Sbjct:    9 GPPLPGSMVPPPPA--GAQRP-GGNSNPSYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRITDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQARGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVTKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLLKNTIPQQYPGGGNVPEAYGQHAAERLVEQMQDHILDTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLCRIISAV-GQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEASSSVILELLAAVMKLFFKRPPEMQSMLGRLLGSAINESNHQDVRDRALLYYRLLEQQPTDQAAAIVAQFRLEE--------TVSVFAESI-ETDLMDKLFQEFNSLAVVYNKPSELFVSPTHLAGPA---------------------------------------APLDDEAEREEAS------SMDLLDMD-----------------------FSSTSNGPPKPPT-TLTLIPSPVMDAATFQGQWGSRPIVAEVVVQLPTLPPQN--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRYYLSETLVEKANRTFRATIK----GVDEASG 790

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BLAST of NO17G01560 vs. NCBI_GenBank
Match: ETM47448.1 (hypothetical protein L914_07843 [Phytophthora parasitica] >ETP17502.1 hypothetical protein F441_08106 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 661.0 bits (1704), Expect = 5.100e-186
Identity = 391/851 (45.95%), Postives = 516/851 (60.63%), Query Frame = 0

Query:   25 GPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHL--TTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAF-----------------RLPSTAGM-------------VLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEG 841
            G + P YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +L  T  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA                   +P   G                  ++ FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   A+ ++ L LL ATMKLF KRPPE QSMLGRLL SA N+ S QDV DRALLYYRLL    T+  AA       EE        IV  FAE    T+L++KLF EFN+LAVVY +PS  FVSP++            L G        A  +                                   PS+DLLDM                      +  S     PP    +S  LV S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ +L + L++KA R L  T+K      GED   G
Sbjct:   34 GSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLXXXXXXXXXXTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTEE--------IVSVFAES-VETDLKDKLFQEFNSLAVVYNKPSELFVSPTH------------LAGAV------APLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPSMDLLDM----------------------DFGSASSGPPPQAAGSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQS--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK------GEDEASG 824

[Close]

BLAST of NO17G01560 vs. NCBI_GenBank
Match: ETO76417.1 (hypothetical protein F444_08184 [Phytophthora parasitica P1976])

HSP 1 Score: 659.1 bits (1699), Expect = 1.900e-185
Identity = 390/851 (45.83%), Postives = 516/851 (60.63%), Query Frame = 0

Query:   25 GPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHL--TTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAFRLPSTAGMVLKRLIG------------------------------FLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEG 841
            G + P YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +L  T  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA     +   + ++  G                              FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   A+ ++ L LL ATMKLF KRPPE QSMLGRLL SA N+ S QDV DRALLYYRLL    T+  AA       EE        IV  FAE    T+L++KLF EFN+LAVVY +PS  FVSP++            L G        A  +                                   PS+DLLDM                      +  S     PP    +S  LV S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ +L + L++KA R L  T+K      GED   G
Sbjct:   38 GSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQVAXXXXXXXXXXXXXXXXXFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTEE--------IVSVFAES-VETDLKDKLFQEFNSLAVVYNKPSELFVSPTH------------LAGAV------APLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPSMDLLDM----------------------DFGSASSGPPPQAAGSSFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQS--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK------GEDEASG 828

[Close]

BLAST of NO17G01560 vs. NCBI_GenBank
Match: KUF97634.1 (hypothetical protein AM588_10006768 [Phytophthora nicotianae])

HSP 1 Score: 652.5 bits (1682), Expect = 1.800e-183
Identity = 393/866 (45.38%), Postives = 519/866 (59.93%), Query Frame = 0

Query:   10 APPASSMTGQQPPQQGPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHL--TTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAF-----------------RLPSTAGM-------------VLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEG 841
            APP  +   Q+P   G + P YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +L  T  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA                   +P   G                  ++ FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   A+ ++ L LL ATMKLF KRPPE QSMLGRLL SA N+ S QDV DRALLYYRLL    T+  AA       EE        IV  FAE    T+L++KLF EFN+LAVVY +PS  FVSP++            L G        A  +                                   PS+DLLDM                      +  S               LV S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ +L + L++KA R L  T+K      GED   G
Sbjct:   15 APPGGAPGAQRP--AGSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLXXXXXXXXXXTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTEE--------IVSVFAES-VETDLKDKLFQEFNSLAVVYNKPSELFVSPTH------------LAGAV------APLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSMDLLDM----------------------DFGSASXXXXXXXXXXXFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQS--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK------GEDEASG 818

[Close]

BLAST of NO17G01560 vs. NCBI_GenBank
Match: ETK87632.1 (hypothetical protein L915_07959 [Phytophthora parasitica] >ETL94214.1 hypothetical protein L917_07777 [Phytophthora parasitica] >ETP45538.1 hypothetical protein F442_08068 [Phytophthora parasitica P10297] >KUF75757.1 Beta-adaptin protein A [Phytophthora nicotianae])

HSP 1 Score: 650.6 bits (1677), Expect = 6.900e-183
Identity = 388/851 (45.59%), Postives = 512/851 (60.16%), Query Frame = 0

Query:   25 GPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHL--TTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAF-----------------RLPSTAGM-------------VLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEG 841
            G + P YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +L  T  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA                   +P   G                  ++ FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   A+ ++ L LL ATMKLF KRPPE QSMLGRLL SA N+ S QDV DRALLYYRLL    T+  AA       EE        IV  FAE    T+L++KLF EFN+LAVVY +PS  FVSP++            L G        A  +                                   PS+DLLDM                      +  S               LV S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ +L + L++KA R L  T+K      GED   G
Sbjct:   34 GSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLXXXXXXXXXXTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTEE--------IVSVFAES-VETDLKDKLFQEFNSLAVVYNKPSELFVSPTH------------LAGAV------APLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSMDLLDM----------------------DFGSASXXXXXXXXXXXFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQS--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK------GEDEASG 824

[Close]

BLAST of NO17G01560 vs. NCBI_GenBank
Match: ETL41056.1 (hypothetical protein L916_07884 [Phytophthora parasitica])

HSP 1 Score: 650.6 bits (1677), Expect = 6.900e-183
Identity = 388/851 (45.59%), Postives = 512/851 (60.16%), Query Frame = 0

Query:   25 GPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHL--TTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAF-----------------RLPSTAGM-------------VLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEG 841
            G + P YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +L  T  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA                   +P   G                  ++ FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   A+ ++ L LL ATMKLF KRPPE QSMLGRLL SA N+ S QDV DRALLYYRLL    T+  AA       EE        IV  FAE    T+L++KLF EFN+LAVVY +PS  FVSP++            L G        A  +                                   PS+DLLDM                      +  S               LV S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ +L + L++KA R L  T+K      GED   G
Sbjct:   34 GSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLXXXXXXXXXXTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTEE--------IVSVFAES-VETDLKDKLFQEFNSLAVVYNKPSELFVSPTH------------LAGAV------APLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSMDLLDM----------------------DFGSASXXXXXXXXXXXFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQS--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK------GEDEASG 824

[Close]

BLAST of NO17G01560 vs. NCBI_GenBank
Match: XP_008904880.1 (hypothetical protein PPTG_11336 [Phytophthora parasitica INRA-310] >ETN09734.1 hypothetical protein PPTG_11336 [Phytophthora parasitica INRA-310])

HSP 1 Score: 650.6 bits (1677), Expect = 6.900e-183
Identity = 388/851 (45.59%), Postives = 512/851 (60.16%), Query Frame = 0

Query:   25 GPTPPAYFVDTKKGEVSELKQLLKTLAVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQDPDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVLALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHL--TTAVPDLQPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIRAIGSIAF-----------------RLPSTAGM-------------VLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERKSEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGYAALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDRALLYYRLL---ATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKLFGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNNLLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANLPAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLWAELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLYGQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEG 841
            G + P YF D KKGEV+ELK LL+ + VE++ KRKR++IKKVIAYMTLGIDVSRLF+EMV+ ++T+DL+ KKMVYLYL NYA    +LA+MC+NTL  DC  +DPMVRGLALR+LCSLRL S+LEYI  PL+ SLTD S YVRKTGV+GILK++ L PE+ + ++ +D LYNMI+D DP VV+NCL+ L+E++ A+EGG+A+NQP+++HLL R+ +F+EWG  ++L +VAKY+P   +E+F+IMN L+  LR SNS VVL T KCF +L  T  +  +Q QV+ R++ PLLTLMAGG+ E+ YC+L H+  +V + P VF  +YRQ Y RYNEPT VKY KI ILAL+A G  VADI++EL+EY TDVDQE++RR+IRAI  IA                   +P   G                  ++ FL++DL  VR E+++VMKDLLR+YP+++ +VLP L   +  V  +P A+AA++WM+GE+ G+   +APY++E LID +   A+ ++ L LL ATMKLF KRPPE QSMLGRLL SA N+ S QDV DRALLYYRLL    T+  AA       EE        IV  FAE    T+L++KLF EFN+LAVVY +PS  FVSP++            L G        A  +                                   PS+DLLDM                      +  S               LV S  +    FQ  W   P V    V +  LP      LE A A RGI  +ASG++   +K F Y QD  G+ +L + L++KA R L  T+K      GED   G
Sbjct:   34 GSSNPNYFTDKKKGEVNELKNLLREVTVEKDVKRKREIIKKVIAYMTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIM-ADEGGIAINQPIVMHLLSRISDFNEWGQCNILQIVAKYKPTGPDEVFTIMNTLEQCLRVSNSAVVLGTAKCFFNLTQTRGMEQIQDQVFERMRQPLLTLMAGGSHEINYCVLHHILLLVGKKPHVFSRDYRQFYNRYNEPTHVKYVKIDILALVADGANVADIVTELSEYVTDVDQELARRAIRAIADIAVSPNLSVNTIPQQYPGGGNVPEAYGQQAAEQLXXXXXXXXXXTMVDFLELDLDYVRDESLVVMKDLLRKYPDKRHDVLPVLGRIIAAV-QQPAAKAAVVWMLGEF-GQDLRRAPYVLEKLIDDFNDEAAPSVLLELLAATMKLFFKRPPEVQSMLGRLLGSAINESSHQDVRDRALLYYRLLEQQPTEQAAAIVAQFRTEE--------IVSVFAES-VETDLKDKLFQEFNSLAVVYNKPSELFVSPTH------------LAGAV------APLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSMDLLDM----------------------DFGSASXXXXXXXXXXXFALVPSPVMDAATFQGQWGSRPVVAEVVVQLPTLPPQS--ELEQAFASRGIVTMASGDVGPQYKFFFYAQDTQGRFFLSETLVEKANRTLRATIK------GEDEASG 824

The following BLAST results are available for this feature:

BLAST of NO17G01560 vs. NCBI_GenBank

BLAST of NO17G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24216.1	0.000e+0	73.20	beta-adaptin-like protein a [Nannochloropsis gadit...	[more]
CBN76291.1	2.500e-201	49.20	Coatomer protein complex, beta sub-unit [Ectocarpu...	[more]
ETI47699.1	7.900e-187	45.95	hypothetical protein F443_08132 [Phytophthora para...	[more]
XP_024577493.1	3.000e-186	46.10	ap-1 complex subunit [Plasmopara halstedii] >CEG41...	[more]
ETM47448.1	5.100e-186	45.95	hypothetical protein L914_07843 [Phytophthora para...	[more]
ETO76417.1	1.900e-185	45.83	hypothetical protein F444_08184 [Phytophthora para...	[more]
KUF97634.1	1.800e-183	45.38	hypothetical protein AM588_10006768 [Phytophthora ...	[more]
ETK87632.1	6.900e-183	45.59	hypothetical protein L915_07959 [Phytophthora para...	[more]
ETL41056.1	6.900e-183	45.59	hypothetical protein L916_07884 [Phytophthora para...	[more]
XP_008904880.1	6.900e-183	45.59	hypothetical protein PPTG_11336 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniR035	ncniR035	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR028	ngnoR028	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO17G01560.1	NO17G01560.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|599841	gene_7734	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
CPC20	gene6213	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO17G01560.1	NO17G01560.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO17G01560 ID=NO17G01560|Name=NO17G01560|organism=Nannochloropsis oceanica|type=gene|length=3311bp
CGAAGACGGTTGGCTATGGTTCCTTTCGGATGTGGTTGTTGGGGTTGGGG
ACGGCATTAGATTTCTTCTCATTGAATTGTACCAAGCTTCTTCAATCACA
TGGTGGCATGGCCCAGTGGCTGGTTGGGTGAGGGGGGCCGTACCCAGTCA
GGCGCTTGCCTTTTAGGCCCTATCCACTGGCAACCCTCCCACAGACCATT
TCAAAAACTCCCAAAAAATCGTAAAAAAAATTCCATGCCATGCCTCGGTC
TAGACAGGAAGCGGGCGCCGAACCTCTGTGGCGTGCCTACCACTTCTCGC
CGTGCATGACCTTCCTGCCATCGTGCCCCTATTCTACCTTGCTGGCTACA
GCCCAGGTTTATCATTCCTGCCATTCAAGCCTTTTTCTTATCCCCATCAC
CTCTAACCACACAACCAGATTAAACCGGCCTCCGATCAGCATTATTATCA
GCGTCATCATAGCACCATCATGAGCGGCCCGCCCCCACAAGCCCTTGCAC
CACCTGCTTCTTCCATGACCGGCCAGCAGCCACCTCAGCAAGGGCCTACG
CCTCCAGCATATTTTGTTGACACCAAAAAGGGGGAAGTGAGTGAACTCAA
GCAGTTGTTAAAGACCTTGGCTGTGGAAAGGGAGCCGAAGCGGAAGCGGG
ACGTGATCAAGAAGGTGATTGCTTACATGACATTGGGGATTGATGTGTCG
CGGCTTTTCACGGAGATGGTCATGGCCATTGAGACGCAGGATTTGGTGGT
TAAAAAGATGGTGTATTTGTATTTGTGCAACTACGCACACGCCAAACCGG
ACCTCGCCCTCATGTGCGTGAATACGTTGCAACGAGATTGTTCCGCCGAC
GACCCCATGGTTCGCGGACTGGCCTTACGTGCCCTGTGTTCACTGCGATT
GCCATCGATGCTCGAATATATCTCTACTCCATTGAGGAGGTCCTTGACGG
ACCAAAGCCCGTATGTGCGCAAGACAGGGGTGATGGGTATTCTGAAGCTC
TTCCACCTCGCGCCGGAGGTAGCGCGAGCAGCGAACTTTGTGGATTTGTT
GTATAATATGATTCAGGATCCTGACCCGCATGTTGTCGCCAATTGCTTGA
TTGTTTTAGATGAGGTACTGGCGGCGGAAGAGGGGGGAATGGCGGTGAAT
CAGCCGTTGATTTTGCATTTGCTTGGGAGGTTGGGGGAATTTAGTGAGTG
GGGGTTGACGCATGTGTTGGCGTTGGTGGCAAAGTATAGGCCCGTTGATG
AGGAGGAGCTCTTTAGCATTATGAACTTATTGGACCCAGTGTTGAGGACG
TCGAATAGTGGGGTGGTGCTGAGTACGATCAAGTGTTTTTTGCACTTGAC
CACAGCAGTGCCTGATTTGCAGCCCCAGGTTTATGTGCGGGTGAAAGCGC
CGTTGCTGACACTGATGGCGGGAGGTAATCCGGAAGTTGAATACTGTATT
TTGAAGCATTTAGAGGCAATTGTTCATCGGGCACCCGGGGTGTTCGATGA
CGAATATCGCCAGCTCTATGTTCGGTATAATGAACCGACATTTGTCAAGT
ACGAAAAAATTGGCATTCTGGCCCTCATAGCCAGCGGCGACACCGTCGCA
GATATCATGTCCGAGCTCGCTGAATACGCCACGGACGTCGATCAAGAAGT
CTCCCGACGCTCTATCCGCGCCATCGGTAGCATTGCTTTCCGCCTGCCTT
CCACCGCAGGGATGGTACTGAAGCGTCTCATCGGATTTTTAGATGTCGAT
CTGAAGAGCGTCCGGCCTGAGACTATCCTAGTCATGAAAGACCTACTCCG
CCGCTACCCCGAACGCAAAAGCGAGGTTTTACCCTCCTTACAACTGTGCC
TGCGACGTGTGGACGACGAGCCAGAGGCCCAAGCAGCTTTGATATGGATG
GTGGGGGAGTATGGAGGGGAGGGGTTCCCCCAAGCGCCCTACCTGGTCGA
ACCTTTGATTGATGGGTATGCGGCCTTGGCCTCTGCAACGCTTAAATTAA
ACTTATTGACGGCGACGATGAAGTTGTTTCTGAAGCGGCCGCCTGAGACG
CAGAGTATGTTGGGGAGGCTTCTGGTATCTGCGACAAACGATTTGAGTTC
TCAGGATGTGCATGATCGGGCCTTGCTTTACTACCGGCTTTTGGCCACTG
ACGTTCAGGCAGCAAAGCAGGTGGTGCTTGGGGGGGAGGAAGGAAGTGGT
GAGGGTCGGACGGTGATTGTTGGAGCATTTGCAGAGGAGAGAGGTATGAC
GAATTTGAGGGAGAAGTTGTTTGGGGAGTTTAATACGCTGGCAGTGGTGT
ACGGGAGGCCCTCGGCGCAGTTTGTTAGCCCAAGgtacggtcatacatgc
caatcatccctttaagccatttgaatgagatcgctacatgccctgacagt
cctgtttgcctatcttcgggattacttattgaccatatctccctccctcc
ctttctttctcccctccccaagCTACCAATGCAAGCCCGCCGAAACCTCC
CTCACCCCGTTCCTGATGGGCGGACAAGGAGCAGAGAACGGCAACGCAGG
GAACAATCTCTTAGACCTGAGCGCCGATGACAGCCTGCTTCCAATCGGAG
GAGCGGAAGGCGGGCTGGAGGGCGACTCACCCCCAAGGAGCGGTAGTGTT
GATTACACAGGGCCGAGCCTTGATCTTTTGGATATGGCTGGCTTTGATGC
CAACCTTCCGGCTGCCTCAGTATCGGCAGCAGCGGCAGTAGGAGTAGGAG
GGGAACTCGCGAGTTTAAGAGAAGACACCCCTCCCACCCCCCCTTCGGCA
TCGTTGGTTCTCGTCGATTCGTTTCAACTTGGACCCGAGGCCTTCCAGCA
GCTCTGGGCAGAGCTTCCCGAAGTGGGTACTTACAATGTTGCCGTTGTTG
CATTGCCTGCCAATGGGCTGCCTGCTCTAGAGGCGGCGCTGGCAGGGCGG
GGGATTACGTGTTTGGCTAGTGGGGAGATGCCGGATGCGTTCAAGCTCTT
TTTGTATGGGCAGGATGAGGGGGGGAAGATTTATTTGGTGCAGGCGCTGT
TACAGAAGGCTGCGAGGCGATTGGAGGTGACCCTTAAGGTCAAGGGTGGT
GGGGTCGGGGAAGATGGGGGCGAAGGGAGAATAGGGGTGGGAATGGAGGG
GGGCGTTGAGGCGTTTGTAGATCTGATAAGTCAGGCTTTGTATGCGCTGG
AATTGATTTAAAAAGGGATCGCGATGGTGGAAAACTAGATGAAATTTGTG
AAAGAATCTGACAACACAAAAACAGAGTAGAATGTAAAACGATGTTTCAC
ATGTATGCGGA

protein sequence of NO17G01560.1

>NO17G01560.1-protein ID=NO17G01560.1-protein|Name=NO17G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=868bp
MSGPPPQALAPPASSMTGQQPPQQGPTPPAYFVDTKKGEVSELKQLLKTL
AVEREPKRKRDVIKKVIAYMTLGIDVSRLFTEMVMAIETQDLVVKKMVYL
YLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEY
ISTPLRRSLTDQSPYVRKTGVMGILKLFHLAPEVARAANFVDLLYNMIQD
PDPHVVANCLIVLDEVLAAEEGGMAVNQPLILHLLGRLGEFSEWGLTHVL
ALVAKYRPVDEEELFSIMNLLDPVLRTSNSGVVLSTIKCFLHLTTAVPDL
QPQVYVRVKAPLLTLMAGGNPEVEYCILKHLEAIVHRAPGVFDDEYRQLY
VRYNEPTFVKYEKIGILALIASGDTVADIMSELAEYATDVDQEVSRRSIR
AIGSIAFRLPSTAGMVLKRLIGFLDVDLKSVRPETILVMKDLLRRYPERK
SEVLPSLQLCLRRVDDEPEAQAALIWMVGEYGGEGFPQAPYLVEPLIDGY
AALASATLKLNLLTATMKLFLKRPPETQSMLGRLLVSATNDLSSQDVHDR
ALLYYRLLATDVQAAKQVVLGGEEGSGEGRTVIVGAFAEERGMTNLREKL
FGEFNTLAVVYGRPSAQFVSPSYQCKPAETSLTPFLMGGQGAENGNAGNN
LLDLSADDSLLPIGGAEGGLEGDSPPRSGSVDYTGPSLDLLDMAGFDANL
PAASVSAAAAVGVGGELASLREDTPPTPPSASLVLVDSFQLGPEAFQQLW
AELPEVGTYNVAVVALPANGLPALEAALAGRGITCLASGEMPDAFKLFLY
GQDEGGKIYLVQALLQKAARRLEVTLKVKGGGVGEDGGEGRIGVGMEGGV
EAFVDLISQALYALELI*

Synonyms

Publications