NO17G01530, NO17G01530 (gene) Nannochloropsis oceanica

Overview
NameNO17G01530
Unique NameNO17G01530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1116
Alignment locationchr17:452572..453687 -

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Properties
Property NameValue
DescriptionN6-adenine-specific
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:452572..453687 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Homology
BLAST of NO17G01530 vs. NCBI_GenBank
Match: EWM24245.1 (n6-adenine-specific [Nannochloropsis gaditana])

HSP 1 Score: 474.9 bits (1221), Expect = 2.200e-130
Identity = 237/289 (82.01%), Postives = 260/289 (89.97%), Query Frame = 0
Query:   67 TRKMDKRWQKKRRRVELGPDGLPIQPIHAPRQMRGGAKLSRISKMGGSQSKRSSKTQGKAWDAAAVGTTGGTSRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGIMGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIGDGRLLGLRNRRYGRTVLAIYAVRPTGKRSGDLRPQEFDFAPQAI 356
            +RK+DKRWQKKRRRVELGPDGLP+QPIHAPRQ+RG     +I K+GGSQ  RS K QGKAWD   VGT GG SRLRIIGGSARGK+LDSP VHLRPMMSKVREALFSTLFSFDLF G++PPRV+DLFCGAGSVGLEALSRGA EAVFVD+A ECCECVE+NLK C+F+A  KGK VRARAEE LR P+RLG++GTFDL+SITPPYEEVVYADLIRDVMESPAV ED+L+VIEYPVELGSLPFNIG GRLLGLRNRRYGRTVLAIYAVRPTG+RSGDLRP+EFDFAP  +
Sbjct:   78 SRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHKLGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLF-GSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDA-VKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPL 364          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: XP_005856016.1 (n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526] >XP_005856319.1 n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526] >EKU20042.1 n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526] >EKU20343.1 n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 473.4 bits (1217), Expect = 6.500e-130
Identity = 236/289 (81.66%), Postives = 260/289 (89.97%), Query Frame = 0
Query:   67 TRKMDKRWQKKRRRVELGPDGLPIQPIHAPRQMRGGAKLSRISKMGGSQSKRSSKTQGKAWDAAAVGTTGGTSRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGIMGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIGDGRLLGLRNRRYGRTVLAIYAVRPTGKRSGDLRPQEFDFAPQAI 356
            +RK+DKRWQKKRRRVELGPDGLP+QPIHAPRQ+RG     +I ++GGSQ  RS K QGKAWD   VGT GG SRLRIIGGSARGK+LDSP VHLRPMMSKVREALFSTLFSFDLF G++PPRV+DLFCGAGSVGLEALSRGA EAVFVD+A ECCECVE+NLK C+F+A  KGK VRARAEE LR P+RLG++GTFDL+SITPPYEEVVYADLIRDVMESPAV ED+L+VIEYPVELGSLPFNIG GRLLGLRNRRYGRTVLAIYAVRPTG+RSGDLRP+EFDFAP  +
Sbjct:   60 SRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHELGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLF-GSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDA-VKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPL 346          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: CEM03521.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 234.6 bits (597), Expect = 5.100e-58
Identity = 131/299 (43.81%), Postives = 182/299 (60.87%), Query Frame = 0
Query:   68 RKMDKRWQKKRRRVELGPDGLPIQPIHAPRQMRGGAKLS-RISKM-------GGSQSKRSSKTQGKAWDAAAVGTTGGTSRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGIMGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIGDGRLLGLRNRRYGRTVLAIYAVRPTGKRSGDLRPQEFDFAPQAIAPK 359
            R+   +   +RR +    +G+P   + A RQ+RG  K   ++ KM       GGS  +   + Q           T   S LR+ GG  +G+KL SPPV+LRPMM+KVREA+F+ L  F +F   +P   LDL+ G G+VG+EALSRGAA   FVDL+ ECC+ V  NL+ C+F+   +G+ +RA  EE LR P R  +    DLV + PPYEEVVY+ L+  +  SP + EDT+V+IEYP E+G+LP  +GDGRL+GLRNR+YGRTVL ++   PTG+   D  P+  +F P  +  K
Sbjct:  153 RREKPKQPPRRREISRDSEGVPDSRLVASRQVRGDMKTRYKLLKMPPPLKESGGSPRRTQGRVQ---------AGTNNPSMLRVGGGVMKGRKLTSPPVYLRPMMAKVREAVFNMLTQFGVFDQEEPITFLDLYSGTGAVGIEALSRGAASGTFVDLSKECCQSVVHNLRQCNFQ--PQGRVIRADVEETLRYPGRFALRDAVDLVFVCPPYEEVVYSRLVSCIASSPLIKEDTIVLIEYPSEIGTLPPVMGDGRLVGLRNRKYGRTVLGVFIADPTGR--FDAEPRAHEFVPVHLTKK 438          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: CBN74861.1 (putative S-adenosylmethionine-dependent methyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 231.5 bits (589), Expect = 4.300e-57
Identity = 129/282 (45.74%), Postives = 179/282 (63.48%), Query Frame = 0
Query:   71 DKRWQKKRRRVELGPD--GLPIQPIHAPRQMRGGAKLSRISKMGGSQSKRSSKTQGKAWDAAAVGTTGGTSRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGIMGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIGDGRLLGLRNRRYGRTVLAIYAVRPTGKRSG--DLRPQEF 349
            D+R+++K R   L  D  GLP + I+APRQ   G        +GG+      + QG+  +     +    +RL++ GG A+G++L+SP V LRPMM+KV+EALFSTL  F +F   +  R LDLF G+GSVG+EALSRGA  A FVD A +CC+   +N   C F    + KAV+    + L  P R G+   FD++++TPPYEEVVY +L++ +  S  V +DTLVVIEYPVELG +P  IGDG ++GLRNRRYGRTV+ ++   P+G+     D RP+EF
Sbjct:   88 DQRYRRKARGANLRRDDTGLPSEKIYAPRQSAYGT-----PTVGGTGRPGKVRPQGEEREV----SINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFE-TEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGF--SDQAKAVKGDVMDVLYNPRRYGLDAPFDVITVTPPYEEVVYTELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEF 357          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: XP_002185534.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43021.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 219.5 bits (558), Expect = 1.700e-53
Identity = 117/214 (54.67%), Postives = 151/214 (70.56%), Query Frame = 0
Query:  141 LRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGI--MGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNI---GDGRLLGLRNRRYGRTVLAIYAVRPTGK-RSGDLRPQEF 349
            LRI  G+A+G++LDSP V+LRPMM KVREA++ST  +F L+      R LD+F G+GSVGLE+LSRGAA   FVDL+ +CC  VE+N+KWC F AGK+ + V   A + L  P   GI  + T+ LV++ PPYEE+VY DLI  V  SP VT+DT+V+IEYPVELG LP  +     G ++G+RNRRYGRTV+AIY V PTG+      RP+EF
Sbjct:    2 LRIAAGTAKGRRLDSPNVYLRPMMGKVREAVYSTFTAFGLYDPATTTRHLDIFAGSGSVGLESLSRGAAHCTFVDLSEDCCSAVERNVKWCDF-AGKE-QIVCGEAIQVLNEPFAAGIPELQTYQLVTLCPPYEEIVYGDLIEAVANSPVVTDDTVVLIEYPVELGCLPHVVRRRDGGAMVGVRNRRYGRTVIAIYVVNPTGRLEVAYSRPEEF 213          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: XP_002285997.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED95638.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 212.2 bits (539), Expect = 2.700e-51
Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 0
Query:  139 SRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNK----------PPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGIMGT--FDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIG---DGRLLGLRNRRYGRTVLAIYAVRPTGKR-SGDLRPQEF 349
            S LRI+GGS RG+KL+SP V+LRPMM KV+EA++ST  SF L+  N+            R LD+F G+GSVGLE+LSRGA    FVD++ +CC   E+N+  C  E     K V   A  ALR PE +GI  +  +DLV++ PPYEE+VYADL+  V  S  VTEDT+++IEYPVELG LP  IG    G L+G+RNR+YGRTV+A+Y V PTG R + + RP+EF
Sbjct:   14 SNLRILGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGLYENNQNIGGGGTGTCSTRHLDIFSGSGSVGLESLSRGARHCTFVDMSNDCCGACERNIVRCGGE--PIAKVVCTDAFRALRQPETVGIDPSCKYDLVTLCPPYEEIVYADLLDAVANSELVTEDTVILIEYPVELGCLPHAIGREDGGVLIGIRNRKYGRTVIAMYIVNPTGARETAESRPEEF 237          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: EJK64018.1 (hypothetical protein THAOC_15292 [Thalassiosira oceanica])

HSP 1 Score: 207.2 bits (526), Expect = 8.700e-50
Identity = 131/296 (44.26%), Postives = 175/296 (59.12%), Query Frame = 0
Query:   85 PDGLPI---QPIHAPRQMRGGA--KLSRISKMGGSQSKRSS---KTQGKAWDAAAVGTTGGTSRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLF--AGNKP--PRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKG--------------KAVRARAEEALRGPERLGI--MGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIG---DGRLLGLRNRRYGRTVLAIYAVRPTGKR-SGDLRPQEF 349
            PD LP    + I A R   G    K +R  + G  Q    S   + QG + D          S LR++GGS RG+KL+SP V+LRPMM KV+EA++ST  SF  +   G +P   R LD+F G+GSVGLE+LSRGA    FVD++ +CC   E+N++ C F+   +G                V   A  ALR PE +GI     +DLV++ PPYEE+VYA+L+  V  S  V EDT++++EYPVELG LP  IG    G L+G+RNR+YGRTV+A+Y V PTG R S + RP+EF
Sbjct:   22 PDELPANLKRKIKASRPTLGHVVPKNARSRQYGNDQGGTKSAQLRPQGLSRDTQRY---NNPSNLRVLGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGFYDGVGGQPCTTRHLDIFSGSGSVGLESLSRGAKHCTFVDMSSDCCGACERNIERCGFDGWNEGGIGTEVGDSGEPVANVVCTDAYRALREPETVGIDPEAKYDLVTLCPPYEEIVYAELLDAVANSKLVKEDTVILVEYPVELGCLPHVIGREDGGVLIGVRNRKYGRTVIAMYIVNPTGDRESAESRPEEF 314          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: OEU19645.1 (Cons_hypoth95-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 203.4 bits (516), Expect = 1.300e-48
Identity = 107/215 (49.77%), Postives = 149/215 (69.30%), Query Frame = 0
Query:  141 LRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEA-GKKGKAVRARAEEALRGPERLGIMG--TFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVEL-GSLP--FNIGDGRLLGLRNRRYGRTVLAIYAVRPTGK-RSGDLRPQEF 349
            L+I+GG+ARG +LDSP V+LRPMM KVREA++ST  SFDL+  + P R LDLF G+GSVGLE++SRGA    F DL+ +CC  + +N+ WC F+      + + +   + LR P  +GI    T+++++I PPYEEV YADL+     SP VT+DT+++IEYPVEL G LP  +N     ++G+RNR+YGRTV+A+Y   PTGK    + RP+EF
Sbjct:    1 LKILGGTARGLRLDSPTVYLRPMMGKVREAVYSTFQSFDLY--DYPVRHLDLFSGSGSVGLESMSRGAKHCTFCDLSRDCCGAISRNIPWCKFDGEDYSTRIICSDVLQLLRDPVSVGIPAGETYNILTICPPYEEVTYADLLDAAAGSPVVTDDTIILIEYPVELWGDLPHVYNGDKVTMIGIRNRKYGRTVIAMYICNPTGKIDKAESRPEEF 213          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: XP_004832442.1 (conserved hypothetical protein [Theileria equi] >EKX72990.1 conserved hypothetical protein [Theileria equi strain WA])

HSP 1 Score: 198.4 bits (503), Expect = 4.000e-47
Identity = 113/263 (42.97%), Postives = 163/263 (61.98%), Query Frame = 0
Query:  108 ISKMGGSQSK-RSSKTQG-KAWDAAAVGTTGGTSRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGIMGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIGDGRLLGLRNRRYGRTVLAIYAVRPTGKRSGDLRPQEFDFAPQAIAPKRYEEQEEVKE 369
            ISK   S+ K R ++ QG K  D ++  T    S ++I GGS RG+KL  PPV++RPMMS+V+ ALFS+L    +F+ ++   V+DLFCG GSVGLEALS GA    FVD++ ECC+    N   C F+   K + +RA A E++  P    I   FDL+   PPY+EV+Y++LI  +  S  + ++  VVIEYP E+  LP N+GDG+LLG++NRRYGRT+LA+Y   P+  R   +     +F P   + KR + +  +K+
Sbjct:  130 ISKKVKSRYKFRPTRMQGIKLHDESSFNT---VSMMKINGGSIRGRKLCCPPVYIRPMMSRVKGALFSSLQHIGMFSPDRECSVIDLFCGTGSVGLEALSYGATNCTFVDISMECCKATSINAGHCGFK--DKSRVLRADAMESITSPWLHSINQKFDLLIACPPYQEVIYSELIEKIANSTILNKNAAVVIEYPKEINFLPQNVGDGKLLGIKNRRYGRTILAVYLYTPSENRMELVESAAKEFVPTTYSRKRLKIEGFIKK 387          
BLAST of NO17G01530 vs. NCBI_GenBank
Match: XP_005537355.1 (similar to N6-adenine-specific methylase [Cyanidioschyzon merolae strain 10D] >BAM81319.1 similar to N6-adenine-specific methylase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 195.7 bits (496), Expect = 2.600e-46
Identity = 117/272 (43.01%), Postives = 163/272 (59.93%), Query Frame = 0
Query:   86 DGLPIQPIHAPRQMRGGAKLSRISKMGGSQSKRSSKT--QG-------KAWDAAAVGTTGGTSRLRIIGGSARGKKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVGLEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEALRGPERLGIMGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYPVELGSLPFNIGDGRLLGLRNRRYGRTVLAIYAVRPTGKRSGDLRPQEF 349
            DG+P +   AP+Q    AK  R  + G  +  R  K   QG       + W   A+       RLRI GG+ARG++L+SPPV++RP M++VREA FS L    +    +P R LDLFCGAG++G EALSRGA+ AVFVD +PECC CV +N+       G          E     P+     G   +V++TPPYEE+ Y +L+R + +S  ++E T+V++EYP ELGSLP  + + RL+G+RNRRYGRTVL +YA +P    + D+R +EF
Sbjct:   85 DGVPAEEPGAPQQ----AKPKRFPR-GRYEQMRKYKVIRQGVTLPGGRRRWQKVAIPL---EPRLRITGGTARGRRLESPPVYVRPAMAQVREACFSILRELQILPSRQPVRFLDLFCGAGTMGFEALSRGASSAVFVDRSPECCACVRRNMSKLGVGEGIALVRETTVEEYLATAPD-----GVLQIVALTPPYEEISYDELLRTLSQSAVISERTVVMLEYPYELGSLP-PVIENRLIGMRNRRYGRTVLGMYACQP--DPNWDMRTEEF 340          
The following BLAST results are available for this feature:
BLAST of NO17G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24245.12.200e-13082.01n6-adenine-specific [Nannochloropsis gaditana][more]
XP_005856016.16.500e-13081.66n6-adenine-specific methylase, partial [Nannochlor... [more]
CEM03521.15.100e-5843.81unnamed protein product [Vitrella brassicaformis C... [more]
CBN74861.14.300e-5745.74putative S-adenosylmethionine-dependent methyltran... [more]
XP_002185534.11.700e-5354.67predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002285997.12.700e-5152.21predicted protein, partial [Thalassiosira pseudona... [more]
EJK64018.18.700e-5044.26hypothetical protein THAOC_15292 [Thalassiosira oc... [more]
OEU19645.11.300e-4849.77Cons_hypoth95-domain-containing protein, partial [... [more]
XP_004832442.14.000e-4742.97conserved hypothetical protein [Theileria equi] >E... [more]
XP_005537355.12.600e-4643.01similar to N6-adenine-specific methylase [Cyanidio... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002936NSK002936Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01530.1NO17G01530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599860gene_7736Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100020g50gene6211Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01530.1NO17G01530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01530 ID=NO17G01530|Name=NO17G01530|organism=Nannochloropsis oceanica|type=gene|length=1116bp
ATGAAACCGTCACAGAGACACGAGCTTTTGCGGTTGCTGGTCTGGGTCAT
AGTGCTGGTGGTACTGGAATCCATGTCGACGTTGGTGCAGGCTTTCATTG
TCGTGATCCGGGCACCACAGCAGCAGCAGCATCACCACCTCTCGACTACC
TTGTTGGCAGCACAGACACCCCCTTCGTCCAGTGGAGAAGCCCAGCATAC
CCGAAAGATGGATAAGCGGTGGCAAAAAAAGCGGCGACGCGTGGAGTTGG
GACCGGACGGCTTGCCAATCCAGCCCATCCATGCCCCGCGTCAGATGCGT
GGTGGCGCAAAGCTTAGCAGGATCTCCAAGATGGGAGGCTCCCAGTCCAA
ACGCAGTAGCAAGACCCAGGGTAAGGCCTGGGATGCTGCGGCAGTGGGAA
CGACGGGCGGTACATCGCGTCTACGTATCATTGGTGGGTCAGCACGGGGT
AAAAAGTTGGATTCCCCCCCTGTCCATTTGCGCCCCATGATGAGCAAAGT
CCGCGAGGCGCTTTTTTCTACGCTCTTTTCCTTCGACTTATTTGCAGGGA
ACAAGCCCCCGCGAGTCTTGGATTTGTTTTGCGGGGCCGGCTCTGTCGGA
TTGGAAGCACTGTCACGTGGGGCCGCCGAAGCTGTGTTTGTAGACTTGGC
ACCCGAGTGCTGCGAGTGCGTGGAGCAGAATCTGAAGTGGTGCAGTTTTG
AGGCGGGAAAGAAGGGTAAGGCCGTGCGGGCACGGGCAGAGGAGGCTTTG
AGGGGCCCTGAAAGACTTGGTATCATGGGTACGTTTGATTTGGTTTCGAT
AACGCCGCCGTACGAAGAGGTGGTTTATGCGGACCTCATTCGAGATGTTA
TGGAAAGCCCGGCAGTAACAGAGGATACACTGGTCGTGATTGAATATCCG
GTAGAATTGGGGAGTTTGCCATTTAACATTGGAGATGGAAGACTTCTGGG
CTTGAGGAATAGGAGGTACGGACGTACGGTTCTGGCGATATATGCCGTGA
GGCCGACAGGAAAGAGGAGTGGGGATCTCAGGCCGCAGGAGTTCGATTTT
GCCCCTCAAGCAATTGCGCCAAAGAGGTATGAAGAACAGGAGGAAGTGAA
GGAAGATGAAAACTAA
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protein sequence of NO17G01530.1

>NO17G01530.1-protein ID=NO17G01530.1-protein|Name=NO17G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MKPSQRHELLRLLVWVIVLVVLESMSTLVQAFIVVIRAPQQQQHHHLSTT
LLAAQTPPSSSGEAQHTRKMDKRWQKKRRRVELGPDGLPIQPIHAPRQMR
GGAKLSRISKMGGSQSKRSSKTQGKAWDAAAVGTTGGTSRLRIIGGSARG
KKLDSPPVHLRPMMSKVREALFSTLFSFDLFAGNKPPRVLDLFCGAGSVG
LEALSRGAAEAVFVDLAPECCECVEQNLKWCSFEAGKKGKAVRARAEEAL
RGPERLGIMGTFDLVSITPPYEEVVYADLIRDVMESPAVTEDTLVVIEYP
VELGSLPFNIGDGRLLGLRNRRYGRTVLAIYAVRPTGKRSGDLRPQEFDF
APQAIAPKRYEEQEEVKEDEN*
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Synonyms
Publications