NO17G01400, NO17G01400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01400 vs. NCBI_GenBank
Match: EWM24217.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 504.2 bits (1297), Expect = 2.800e-139 Identity = 246/299 (82.27%), Postives = 272/299 (90.97%), Query Frame = 0 Query: 3 VWKQVLFLVAFISTVQAFLPGQKNRLVVTRCGGGSSSRNIVRRSLAMEYLDVTLQKPMGIVLEENDPKLRGVYVKSLSQGGAAAASGKIQAGDHLVAVQGEVVTGKDLDMVLATVGNAPAEGVQMKFYRGSLGDVINPQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQLA 302 +WKQVL V S FLPG +R+ VTR S R++LAME++DV LQKPMGIVLEENDPKL+GVYVKSLSQGGAAAASGKIQAGDHLV+VQGE+VTGKDLD VL+TVGNAP+E VQM+FYRG+LGD+INPQV+FDIDIGG+RAGR+TCRLRKDVVPKTAENFRALCTGEKGFGYK SAFHRVIPGFMCQGGDFTSGDGRGGKSIYG KF+DE+FELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVT+GLD+L+KIEAVGSQVGKT+VPV+IADCGQL+ Sbjct: 1 MWKQVLLFVTLFSQAAGFLPGH-SRISVTR---SSIRSRYARKALAMEFVDVMLQKPMGIVLEENDPKLQGVYVKSLSQGGAAAASGKIQAGDHLVSVQGEMVTGKDLDAVLSTVGNAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQLS 295
BLAST of NO17G01400 vs. NCBI_GenBank
Match: XP_005841926.1 (hypothetical protein GUITHDRAFT_83873, partial [Guillardia theta CCMP2712] >EKX54946.1 hypothetical protein GUITHDRAFT_83873, partial [Guillardia theta CCMP2712]) HSP 1 Score: 318.2 bits (814), Expect = 2.800e-83 Identity = 151/254 (59.45%), Postives = 188/254 (74.02%), Query Frame = 0 Query: 50 EYLDVTLQKPMGIVLEENDPKLRGVYVKSLSQGGAAAAS-----GKIQAGDHLVAVQGEVVTGKDLDMVLATVGNAPAEGVQMKFYRGSLGDVINPQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCG 299 E VT++KPMG+V EEND + +G+ VK + + A A+ KI D+L+ V GE GK D A + PA+ +++ F RG + V NP+V+FDI+IGG++AGR+ LRKD PKT ENFR LC+GE+G+GYKG FHRVIPGFMCQGGDFT+GDG GG+SIYG F DE+F+L HD GILSMANAGPNTNGSQFF+CTV TP+LDGKHVVFG+V DG++V++ IEAVGS GKTA VVIADCG Sbjct: 80 EAYTVTMKKPMGLVFEENDSQAKGILVKKIDKASADQANLFNLENKISIRDYLLRVNGESCLGKSFDEAFAMIAENPAQELELTFARGGVEAVYNPRVWFDIEIGGEKAGRIKIELRKDAAPKTVENFRKLCSGEEGYGYKGCTFHRVIPGFMCQGGDFTNGDGTGGRSIYGKTFADENFDLKHDKAGILSMANAGPNTNGSQFFICTVPTPFLDGKHVVFGEVEDGMEVVKAIEAVGSSSGKTAAKVVIADCG 333
BLAST of NO17G01400 vs. NCBI_GenBank
Match: CBN79323.1 (cyclophilin [Ectocarpus siliculosus]) HSP 1 Score: 305.1 bits (780), Expect = 2.500e-79 Identity = 148/258 (57.36%), Postives = 184/258 (71.32%), Query Frame = 0 Query: 45 RSLAMEYLDVTLQKPMGIVLEENDPKLRGVYVKSLSQGGAAAASGKIQAGDHLVAVQGEVVTGKDLDMVLATVGNAPAEGVQMKFYRGSLGDVINPQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGE--KGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQL 301 R E L+V+L+KPMG+VLEEN G+ VK ++ GG+A G ++ GD L+ VQGE V G D D + + +AP +GV++K +RG D+ NPQVYFDI+I G+ GR+ +LR DVVPKTAENFR LCTGE G +KG+ FHRVIPGFM QGGDF + DG GG SIYG KFEDE+F L H GPG+LSMANAGP TNGSQFF+C +TPWLD KHVVFG+V DG ++ IE +GS GK + + I DCGQL Sbjct: 79 RMAESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLTADLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKGTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVVDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 336
BLAST of NO17G01400 vs. NCBI_GenBank
Match: AGZ87977.1 (peptidyl-prolyl cis-trans isomerase A [Conus textile]) HSP 1 Score: 271.2 bits (692), Expect = 4.000e-69 Identity = 126/162 (77.78%), Postives = 139/162 (85.80%), Query Frame = 0 Query: 139 NPQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQL 301 NP+V+FD+ IGG AGR+ LR DV PKTAENFRALCTGEKGFGYKGS+FHRVIP FMCQGGDFT+ +G GGKSIYG+KFEDE+F L H GPGILSMANAGP TNGSQFFLCT ET WLDGKHVVFG V +G+DV+QKIEA GSQ GKT+ VVIADCGQL Sbjct: 3 NPRVFFDMTIGGSPAGRIVMELRADVAPKTAENFRALCTGEKGFGYKGSSFHRVIPQFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGPGTNGSQFFLCTAETAWLDGKHVVFGTVVEGMDVVQKIEAKGSQSGKTSAKVVIADCGQL 164
BLAST of NO17G01400 vs. NCBI_GenBank
Match: ADC80505.1 (peptidyl prolyl cis-trans isomerase A (II) [Conus novaehollandiae]) HSP 1 Score: 271.2 bits (692), Expect = 4.000e-69 Identity = 125/162 (77.16%), Postives = 142/162 (87.65%), Query Frame = 0 Query: 139 NPQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQL 301 NPQV+FDI IGG AGR+ LR DVVPKTAENFRALCTGEKGFGYKGS+FHRVIPGFMCQGGDFT+ +G GGKSIYG+KFEDE+F+L H PGILSMANAGPNTNGSQFFLCTV+T WLDGKHVVFG V +G+DV++ +E +GSQ G T++ VVIADCGQL Sbjct: 3 NPQVFFDITIGGQPAGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDFTNHNGTGGKSIYGNKFEDENFKLKHTEPGILSMANAGPNTNGSQFFLCTVKTTWLDGKHVVFGSVVEGMDVVKAMEKLGSQSGATSLKVVIADCGQL 164
BLAST of NO17G01400 vs. NCBI_GenBank
Match: ATG85038.1 (peptidyl prolyl cis-trans isomerase A, partial [Conus lividus]) HSP 1 Score: 268.5 bits (685), Expect = 2.600e-68 Identity = 122/161 (75.78%), Postives = 138/161 (85.71%), Query Frame = 0 Query: 140 PQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQL 301 P+ +FDI IGG GR+ LR DVVPKTAENFRALCTGEKG+GYKGS FHRVIPGFMCQGGDFT+ +G GGKSIYG+KFEDE+F+L H GPGILSMANAGPNTNGSQFFLCT +T WLDGKHVVFG V +G+DV++K+E VGSQ GKT+ V IADCGQL Sbjct: 4 PRCFFDIAIGGKPTGRIVMELRADVVPKTAENFRALCTGEKGYGYKGSTFHRVIPGFMCQGGDFTAHNGTGGKSIYGNKFEDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAQTSWLDGKHVVFGSVVEGMDVVKKVEGVGSQSGKTSAKVTIADCGQL 164
BLAST of NO17G01400 vs. NCBI_GenBank
Match: AQQ10877.1 (peptidyl prolyl cis trans isomerase A, partial [Conus miles]) HSP 1 Score: 268.1 bits (684), Expect = 3.400e-68 Identity = 123/161 (76.40%), Postives = 139/161 (86.34%), Query Frame = 0 Query: 140 PQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQL 301 P+ YFDI IGG +GR+ LR DVVPKTAENFRALCTGEKGFGYKGS+FHRVIP FMCQGGDFT+ +G GGKSIYG+KF DE+F+L H GPGILSMANAGPNTNGSQFFLCT +T WLDGKHVVFG V +G+D+++KIE+VGSQ GKT VVIADCGQL Sbjct: 4 PKCYFDIAIGGQNSGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSSFHRVIPDFMCQGGDFTNHNGTGGKSIYGEKFADENFQLKHTGPGILSMANAGPNTNGSQFFLCTAKTQWLDGKHVVFGSVVEGMDLVKKIESVGSQSGKTTKKVVIADCGQL 164
BLAST of NO17G01400 vs. NCBI_GenBank
Match: XP_005787022.1 (peptidyl-prolyl cis-trans isomerase [Emiliania huxleyi CCMP1516] >EOD34593.1 peptidyl-prolyl cis-trans isomerase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 267.3 bits (682), Expect = 5.700e-68 Identity = 125/160 (78.12%), Postives = 139/160 (86.88%), Query Frame = 0 Query: 142 VYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQLA 302 VYFD+ IGG AGR+ LR D+VPKTAENFRALCTGEKGFGYKGSAFHRVI FMCQGGDFT+G+G GGKSIYG KF DE+F+L H GPGILSMANAGP TNGSQFFLCTV+T WLDGKHVVFG VT G++V++ IEAVGSQ GKTA PVVIADCGQ++ Sbjct: 5 VYFDMTIGGAPAGRIEMTLRDDIVPKTAENFRALCTGEKGFGYKGSAFHRVITNFMCQGGDFTAGNGTGGKSIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGKTAKPVVIADCGQIS 164
BLAST of NO17G01400 vs. NCBI_GenBank
Match: AGZ87978.1 (peptidyl-prolyl cis-trans isomerase A [Conus caracteristicus]) HSP 1 Score: 267.3 bits (682), Expect = 5.700e-68 Identity = 123/162 (75.93%), Postives = 140/162 (86.42%), Query Frame = 0 Query: 139 NPQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQL 301 NP+V+FD+ +GG AG + LR D+VPKTAENFRALCTGEKGFGYKGS+FHRVIP FMCQGGDFT+ +G GGKSIYG+KFEDE+F+L H GPGILSMANAGP TNGSQFFLCTV+T WLDGKHVVFG V +G+DV+ KIE VGSQ GKT+ VVIADCGQL Sbjct: 3 NPRVFFDMTVGGKSAGGIVMELRSDLVPKTAENFRALCTGEKGFGYKGSSFHRVIPQFMCQGGDFTNHNGTGGKSIYGNKFEDENFKLKHTGPGILSMANAGPGTNGSQFFLCTVKTQWLDGKHVVFGSVVEGMDVVTKIEKVGSQSGKTSEKVVIADCGQL 164
BLAST of NO17G01400 vs. NCBI_GenBank
Match: ADC80504.1 (peptidyl prolyl cis-trans isomerase A (I) [Conus novaehollandiae]) HSP 1 Score: 267.3 bits (682), Expect = 5.700e-68 Identity = 124/162 (76.54%), Postives = 138/162 (85.19%), Query Frame = 0 Query: 139 NPQVYFDIDIGGDRAGRVTCRLRKDVVPKTAENFRALCTGEKGFGYKGSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGDKFEDESFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTDGLDVLQKIEAVGSQVGKTAVPVVIADCGQL 301 NPQV+FDI+IGG GR+ LR DVVPKTAENFRALCTGEKGFG+KGS+FHRVIPGFMCQGGDFT +G GGKSIYG+KFEDE+F+L H G GILSMANAGPNTNGSQFFLCT +T WLDGKHVVFG V DG+DV++ IE VGS G T+ VVIADCGQL Sbjct: 3 NPQVFFDIEIGGKPVGRIVMELRADVVPKTAENFRALCTGEKGFGFKGSSFHRVIPGFMCQGGDFTRHNGTGGKSIYGNKFEDENFKLKHTGAGILSMANAGPNTNGSQFFLCTAKTQWLDGKHVVFGNVVDGMDVVKAIELVGSDSGTTSKKVVIADCGQL 164 The following BLAST results are available for this feature:
BLAST of NO17G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01400 ID=NO17G01400|Name=NO17G01400|organism=Nannochloropsis oceanica|type=gene|length=1524bpback to top protein sequence of NO17G01400.1 >NO17G01400.1-protein ID=NO17G01400.1-protein|Name=NO17G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top Synonyms
Publications
|