NO17G01260, NO17G01260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01260 vs. NCBI_GenBank
Match: EWM24323.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 446.4 bits (1147), Expect = 1.400e-121 Identity = 233/289 (80.62%), Postives = 255/289 (88.24%), Query Frame = 0 Query: 315 LRHVVYLSSLGSEKALFQFSFDSMSGVLEKKKAVEQSIKRLSKSLGYNFSIIRVGSLGPVKSGEEALNLSPGDPFNGGATNYATAAQAVVQSIALPMALNASFSVINGKGTSPPTDAGWRDSMLKLVGPEVLRLSFKETDVLGMRMSLRAWALQYMEGERRLTTKVFAVRTPLGAKIYFLPTMQSLGPGFREEKAIEKARMKGEAILGGQKPTRPILEGGLEVCVEEV-TEAGKE-GDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEIESTEKSAKSGRRVGGGTPP 602 LRHV+YLSSLGSE+A FQFS DSMSG LEKKKAVEQS++RLSK LG+NFSIIRVGSLGP +GE+AL+L PGDPF+ G TN+ TAAQAVVQS+ALP ALNASFSV+N KG P D WRDS+LK+VGPEVLRL+F+ V MRMSLRAWALQ+MEGER+LTTKVFAVRTPLGAKIYFLPTMQ+LGPGFREEKAIEKARMKGEA LGGQKPTRPILEGGLEVCVEEV E G+E G KRVRVRRIAMEEGTVVKAMSERELL+SLKAE+ESTEK A GR VGGG PP Sbjct: 20 LRHVIYLSSLGSERAAFQFSLDSMSGALEKKKAVEQSVRRLSKMLGFNFSIIRVGSLGPGNAGEQALSLEPGDPFSAGQTNWPTAAQAVVQSMALPSALNASFSVVNCKGKEAPVDDDWRDSLLKVVGPEVLRLTFRAAPVADMRMSLRAWALQFMEGERKLTTKVFAVRTPLGAKIYFLPTMQNLGPGFREEKAIEKARMKGEASLGGQKPTRPILEGGLEVCVEEVGKEGGREAGKKRVRVRRIAMEEGTVVKAMSERELLESLKAEVESTEKMAAQGRSVGGGAPP 308
BLAST of NO17G01260 vs. NCBI_GenBank
Match: EWM24310.1 (hypothetical protein Naga_100047g29 [Nannochloropsis gaditana]) HSP 1 Score: 208.0 bits (528), Expect = 8.200e-50 Identity = 108/168 (64.29%), Postives = 131/168 (77.98%), Query Frame = 0 Query: 82 LQMKIQWDPYTGQFLDLGDDVEEIGVPSRNPXXXXXXXXXXXXXXSGECEQGSKATGVKTEDLQVVGGNIGKANAYIAQKLMEASIEEGTGIVDALMKELDDLDLAEGEENTWPKITENMQSVLRNEEAAAYETVCRNVDLTRATTVLVYLRESAMAPALKECLKARG 250 L MKIQWDPYTGQF+DLGDD EIGVPSR P SG E+ +KATG+K EDL+ VGG++GK NAYIAQKLME+ IEE VDAL+++L+DL LAEGEE TWP+ITE+MQSVLRNE+AAA ETV RNVDLTRATT+L++ ++S +AP L++ LKARG Sbjct: 118 LCMKIQWDPYTGQFIDLGDDAGEIGVPSRTP---------SSSASSGPGEEPNKATGLKAEDLKGVGGSVGKVNAYIAQKLMESPIEESPVKVDALLQDLEDLGLAEGEEATWPEITESMQSVLRNEQAAALETVRRNVDLTRATTILIHSKDSGLAPVLRDALKARG 276
BLAST of NO17G01260 vs. NCBI_GenBank
Match: XP_005837257.1 (hypothetical protein GUITHDRAFT_151267 [Guillardia theta CCMP2712] >EKX50277.1 hypothetical protein GUITHDRAFT_151267 [Guillardia theta CCMP2712]) HSP 1 Score: 90.9 bits (224), Expect = 1.500e-14 Identity = 74/205 (36.10%), Postives = 101/205 (49.27%), Query Frame = 0 Query: 383 LSPGDPFNGGATNYATAAQAVVQSIAL-PMALNASFSVINGKGTSPPTDAGWRDSMLKLVGPEVLRLSFKETDVLG-MRMSLRAWALQYMEGERRLTTKVFAVRTPLGAKIYFLPTMQSLGPGFREEKAIEKARMKGEAILGGQKPTRPI-LEGGLEVCVEEVTEAGKEGDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEIES 585 L PGD N AA+AV+QS+ P ALNAS S+I K + PT W D L+L GPE+ R M +WA ++ + LTT V V T G ++ F P + F+EEK EKAR KG+ K + EGG+EV VE+ + RVR R M E TV+K SE+ +L SL+ ++ + Sbjct: 2 LKPGDDLVED-INPCVAAEAVLQSMLFQPSALNASMSIIGEKSANFPTQTEWDDEFLRLDGPELFREPLGSVSATACMDWVKTSWAPRWEKSGSGLTTPVKIVETANGVQLVFRPPKSNF-VSFKEEKEAEKAREKGDMDEKNSKFRQVTDKEGGVEVVVED------KPFPRVRALRCNMGEETVIKETSEKIILSSLRKDVSA 198
BLAST of NO17G01260 vs. NCBI_GenBank
Match: CEL98445.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 89.7 bits (221), Expect = 3.300e-14 Identity = 81/281 (28.83%), Postives = 130/281 (46.26%), Query Frame = 0 Query: 315 LRHVVYLSSLGSEKALFQFSFDSMSGVLEKKKAVEQSIKRLSKSLGYNFSIIRVGSLGPVKSGEEALNLSPGD----PFNGGATNYATAAQAVVQSIALPMALNASFSVINGKGTSPPTDAGWRDSMLKLVGPEVLRLSFKETDVLGMRMSLRAWA-LQYMEGE--RRLTTKVFAVRTPLGAKIYFLPTMQSLGPGFREEKAIEKARMKGEAILGGQKPTRPILEGGLEVCVEEVTEAGKEGDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEIESTEKS 589 L HV+ LS LG ++ + M L+ K+ VE+SI + S G ++S +RVG L P+ + GD P + T A AAQ +V+ + +A NA+ S+ + G P + W D+ +KL GPE+ R S + V+ + L+ WA L EG+ + LTT V P G ++ F P + + EE + + Q P P EGG+++ E+ RVR R + VK SE +++ LK ++ +K+ Sbjct: 270 LEHVILLSPLGIDRR-DRGGLIGMFTDLDDKRRVEESIIQQSNKRGLDYSFVRVGKLEPLAGEMAGIRFEAGDSPSIPLDAMTTQEA-AAQCLVRCVHQRVAYNATMSLASAPGKDFPQEWEWDDAFIKLDGPELYRESIQGMPVVHVVNFLKDWARLWLREGQYYKHLTTPVAIRSLPGGVRLQFNPRRPRVDDDYYEEPVSDSDWSR------PQPP--PNKEGGVDIVAEDWPYT------RVRALRSCLGRDVTVKETSEAAIVEFLKKDVRKLKKT 534
BLAST of NO17G01260 vs. NCBI_GenBank
Match: KOO25859.1 (NAD-dependent epimerase dehydratase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 89.0 bits (219), Expect = 5.600e-14 Identity = 86/284 (30.28%), Postives = 133/284 (46.83%), Query Frame = 0 Query: 315 LRHVVYLSSLGSEKA-LFQFSF-DSMSGVLEKKKAVEQSIKRLSKSLGYNFSIIRVGSLGPVKSGEEALNLSPGDPFNGGATNYATAAQAVVQSIALPMALNASFSVI----NGKGTSPPTDAGWRDSMLKLVGPEVLRLSF----KETDVLGMRMSLRAWALQYMEGERRLTTKVFAVRTPLGAKIYFLPTMQSLGPGFREEKAIEKARMKGEAILGGQKPTRPILEGGLEVCVEEVTEAGKEGDKRVRVRRIAME-EGTVVKAMSERELLDSLKAEIESTEK 588 LR VV+LSS G E+A FS ++ G L+K +A EQ + +K +FS++RVG L ++ GD G T +A+ ++QS++ A+NASFSV + G + P ++ W D LKLVGPE+ R + D +R LR +AL++++ LTT V G + ++ + E K K ++ +G L + A E RVRV R M+ +G V+K MSE +L++L I + EK Sbjct: 157 LRRVVFLSSHGVERADKLPFSLVNAWGGPLDKLRAAEQEVILRAKGRLPSFSVVRVGKLVDADGAPRRAEIASGDALQGDVT-IGSASSVLLQSLSRQEAVNASFSVAPLARDLVGAAAPDESHWADEFLKLVGPELYRRALGGDAAAIDGDELRGWLREFALRFVQPGAGLTTPVELDDLEGGRGVILRFVQKNPNVRYANFDQRETDDEKWAKAKASSKQSKATPDGALYL------HAETEPYARVRVTRAEMDKDGIVIKPMSEATILEALDKAIATLEK 433
BLAST of NO17G01260 vs. NCBI_GenBank
Match: XP_002289641.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93178.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 86.7 bits (213), Expect = 2.800e-13 Identity = 91/308 (29.55%), Postives = 144/308 (46.75%), Query Frame = 0 Query: 317 HVVYLSSLGSEKA-LFQFSFDSM-SGVLEKKKAVEQSIKRLSKS------LGYNFSIIRVGSLGPVK-SGEEALNLSPGDPFNGGATNYATAAQAVVQSIAL-PMALNASFSVINGKGTSPPTDA-GWRDSMLKLVGPEVLRLS------FKETDVLGMRMS-----LRAWALQYMEGERR---LTTKVFAVRTPL------------GAKIYFLPTMQSLGPGFR---EEKAIEKARMKGEAILGGQKPTRPILEGGLEVCVEEVTEAGKEGDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEIES 585 HVV +S +G+E+ +S +M G L+K + +EQ+I +S+S +++I++ G + G E + + PGD +G AA ++Q++A P A N++ T D+ W D L L GPE+LR++ E +L + ++ WA Y EG+R+ LTT V T G +I F T + G ++ EEK EK R G+A+ T ++G E VE + E +GD RVR RR M+ TVVK MSE ++ +LK + + Sbjct: 341 HVVIVSGIGTERTNKMPYSMQNMFGGKLDKLREIEQAIVAISRSRIAGKQSPLDYTIVKYGEVASSDGDGGENIAIQPGDILDGD-IGVNAAANVLLQAMAYQPYARNSTMCATGRLPTDSTIDSETWNDKFLCLSGPELLRINAGRGGDIVEGQILDSKFEQLAQYIKEWASAY-EGDRKGTGLTTPVLVRNTRKAPSKFDGVVAREGVRILFQTT--NTGDRYKSATEEKMEEKERSGGDAVKKSSSATPVKVKGRNEGGVEILVEKTNDGDIRVRARRCNMDAKTVVKEMSEDVIVKNLKRAVNA 644
BLAST of NO17G01260 vs. NCBI_GenBank
Match: EJK49036.1 (hypothetical protein THAOC_32126 [Thalassiosira oceanica]) HSP 1 Score: 80.1 bits (196), Expect = 2.600e-11 Identity = 93/308 (30.19%), Postives = 145/308 (47.08%), Query Frame = 0 Query: 317 HVVYLSSLGSEKA-LFQFSFDSM-SGVLEKKKAVEQSIKRLSK------SLGYNFSIIRVGSLGPVKSGEEA-LNLSPGDPFNGGATNYATAAQAVVQSIAL-PMALNASFSVINGKGTSPPTD-AGWRDSMLKLVGPEVLRL-SFKETDVL---------GMRMSLRAWALQYMEGERR---LTTKVFAVRT--PLGAKIYFLPT-------MQSLGPGFR-----EEKAIEKARMKGEAILGGQKPT----RPILEGGLEVCVEEVTEAGKEGDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEI 583 HVV +SSLG+E+ +S ++ G L+K + +E ++ +S+ +++I+++G + EA + + PGD + G AA ++Q++A P A N++ D A W D L L GPE+LR+ + TDV + ++ W+ QY EG+R+ LTT V R+ P ++I + QS G R EEKA EK R G PT +P EGG+EV +E+ T G RVR RR M + T+VK MSE ++ +LK + Sbjct: 331 HVVLISSLGTERTNKMPYSMQNLFGGKLDKVREIELALVSISRGRKQGTQTPLDYTIVKLGDIVNSDGDYEADVKILPGDKLD-GEIGVNAAANVLLQAMAYQPYARNSTLCAAGSMPADSALDAAAWNDMFLCLSGPELLRIEAGSGTDVKEALFDPKFEQLAEYVQGWSTQY-EGDRKGTGLTTPVLVRRSRKPSASEIDGVAARQGIRILFQSTNTGDRYKSASEEKADEKER-SGGGTTTRASPTKLVGKPSKEGGVEVLIEKTT----GGTIRVRARRCNMGDKTIVKEMSEEVIVKNLKRAV 631
BLAST of NO17G01260 vs. NCBI_GenBank
Match: XP_005772018.1 (hypothetical protein EMIHUDRAFT_436097 [Emiliania huxleyi CCMP1516] >EOD19589.1 hypothetical protein EMIHUDRAFT_436097 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 71.6 bits (174), Expect = 9.200e-9 Identity = 82/296 (27.70%), Postives = 125/296 (42.23%), Query Frame = 0 Query: 316 RHVVYLSSLGSEKA-LFQFSFDSM-SGVLEKKKAVEQSIKRLSKSLGYNFSIIRVGSLGP--------------VKSGEEALNLSPGDPFNGGATNYATAAQAVVQSIALPMALNASFSV--INGKGTSPPTDAGWRDSMLKLVGPEVLRLSFKETDVLGMRMSLRAWALQYMEGERRLTTKVFAVRTPLGAKIYFLPTMQSLGPGFREEKAIEKARMKGEAILGGQKPTRPILEGGLEVCVEEVTEAGKEGDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEIESTEKSAKSGR 594 R ++ +S+ G ++ FS ++M G L+K++A+EQ ++ SI R G L P L+PGD +G + A AA +V+++ P ++NA+FS G D LKLVGPE+ R + LR +A Q + + L T V P G + F+ T G G+ + E+AR + G + R +G L + E E R+RV R M GT+VK SE LL L I+ E +A+ R Sbjct: 279 RRLLLVSTHGVDRTNALPFSMENMFGGKLDKQRALEQEALLAARKALPGHSIARFGKLKPXXXXXXXXXXXXXXXXXXXXXXELAPGDALSGEMST-ADAAAVLVEALRRPESVNATFSAAXXXXXXXXXXXXXGLNDEWLKLVGPEIYRRPLEAVTPHEAASWLREFARQLLRPGQGLPTPVTVADLPDGVLLRFVTT----GYGY-DSYEKEEARGAEDKWAEGGERARGNPDGALRLLAE------SEPSARLRVARAEMAPGTLVKETSEELLLRRLAKGIDELEAAARRSR 562
BLAST of NO17G01260 vs. NCBI_GenBank
Match: GAX10203.1 (hypothetical protein FisN_3Lh398 [Fistulifera solaris]) HSP 1 Score: 69.3 bits (168), Expect = 4.600e-8 Identity = 83/302 (27.48%), Postives = 136/302 (45.03%), Query Frame = 0 Query: 318 VVYLSSLGSEKA-LFQFSFDSMSGV-LEKKKAVEQSIKRLSKSL----GYNFSIIRVGSLGPVKSGEEALNLSPGDPFNGGATNYATAAQAVVQSIAL-PMALNASFSVINGKGTSPPT------DAGWRDSMLKLVGPEVLRLSFKETDVLGMRMSL----RAWALQYMEGERRLTTKVFAV-----------RTPLGAKIYFLPTMQSLGPGFREEKAIEKARMKGEAILGGQKPTRPILEGGLEVCVEEVTEAGKEGDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEIESTEKSAKS 592 ++ +S++G+E+ ++ +M G L+K++ +E++I ++ ++++ + G L K ++ L PGD + G+T+ TA + Q+I P A NA+ S + G P T + D LKL GPE+ R ET+V SL R WA E + LTT + AV + G ++ FLPT REE+ A L Q EGG+E+ V E +E RVR +R + TV+K +SE +L L+ ++ K K+ Sbjct: 316 LIAVSTVGTERTNKMPYTMQNMMGAKLDKRRQIEEAIINTVRNRVVEPAMDYTVCKFGEL---KESKDVLAFEPGDVVD-GSTDPDTAITILTQAIGYQPAARNATLSCV---GKLPVTRNEEELNNLLDDFFLKLDGPELWREDLTETEVSKNYASLVEYIREWAELLAESGKGLTTPIRAVPVIDPISKSGIQQSQGVQLLFLPTSTGKNYVSREEEKQRGTEKSSTAPLRTQTK-----EGGIEIMV----EITRENKLRVRAKRCNYADDTVIKEISEETILKRLRDGVDVWIKDHKT 601
BLAST of NO17G01260 vs. NCBI_GenBank
Match: GAX16121.1 (hypothetical protein FisN_3Hh398 [Fistulifera solaris]) HSP 1 Score: 67.8 bits (164), Expect = 1.300e-7 Identity = 83/302 (27.48%), Postives = 139/302 (46.03%), Query Frame = 0 Query: 318 VVYLSSLGSEKA-LFQFSFDSMSGV-LEKKKAVEQSIKRLSKSL----GYNFSIIRVGSLGPVKSGEEALNLSPGDPFNGGATNYATAAQAVVQSIAL-PMALNASFSVINGKGTSPPT------DAGWRDSMLKLVGPEVLRLSFKETDVLGMRMSL----RAWALQYMEGERRLTTKVFAV-----------RTPLGAKIYFLPTMQSLGPGFREEKAIEKARMKGEAILGGQKPTRPILEGGLEVCVEEVTEAGKEGDKRVRVRRIAMEEGTVVKAMSERELLDSLKAEIESTEKSAKS 592 ++ +S++G+E+ ++ +M G L+K++ +E++I ++ ++++ + G L K ++A PGD + G+T+ TA + Q+I P A NA+ S + G P T + D LKL GPE+ R ET+V SL R WA E + LTT + AV + G ++ FLPT REE EK R ++ ++ EGG++V V E +E RVR +R + TV+K +SE +L L+ ++ K K+ Sbjct: 316 LIAVSTVGTERTNKMPYTMQNMMGAKLDKRRQIEEAIINTVRNRVVEPAMDYTVCKFGEL---KESKDAFAFEPGDVVD-GSTDPDTAITILTQAIGYQPAARNATLSCV---GKLPVTRNEEELNDLLDDFFLKLDGPELWRQELAETEVTKNYASLVEYIREWAELLAESGKGLTTPIRAVPVVDPISKSGIQHSQGVQLLFLPTSTGKNYVSREE---EKQRGTEKSSTAPRRTQTK--EGGIQVMV----EITRENKLRVRAKRCNYADDTVIKEISEETILKRLRDGVDVWVKDHKT 601 The following BLAST results are available for this feature:
BLAST of NO17G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01260 ID=NO17G01260|Name=NO17G01260|organism=Nannochloropsis oceanica|type=gene|length=2282bpback to top protein sequence of NO17G01260.1 >NO17G01260.1-protein ID=NO17G01260.1-protein|Name=NO17G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bpback to top Synonyms
Publications
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