NO17G01230, NO17G01230 (gene) Nannochloropsis oceanica

Overview
NameNO17G01230
Unique NameNO17G01230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5849
Alignment locationchr17:383969..389817 +

Link to JBrowse

Properties
Property NameValue
DescriptionXenotropic and polytropic murine leukemia virus receptor xpr1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:383969..389817 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR033507Syg1
IPR004342EXS_C
IPR004331SPX_N
Homology
BLAST of NO17G01230 vs. NCBI_GenBank
Match: EWM24292.1 (xenotropic and polytropic murine leukemia virus receptor xpr1 [Nannochloropsis gaditana])

HSP 1 Score: 1185.2 bits (3065), Expect = 0.000e+0
Identity = 617/805 (76.65%), Postives = 681/805 (84.60%), Query Frame = 0
Query:    1 MVNFSAKLQDNTRQEWAEHYIDYKALKKLLKPLKKGMLPKKGSSMIGHYGGAEASDSDEEPSTHHDFVSDIKERIIFITKGGKT-KKPGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEHXXXXXXXXXXDDHGLLSPDERGRKQGESEKFEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMPSRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWDCVVQVAKFGKPTIVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFPDWIPAGWYPLILVSYTVYCLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSRDIDGEVDAQPGDWETSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSFSTESQHEYRDPKNTNNLKVILEVSLVAGLVIFLSIGAVVVADGIDEG 805
            MVNF+AKLQDNTRQEW EHY+DYKALK+LLKPLKKG  P K +SM+  Y G +ASDSDEE +   D V  +K+R+  ++  GK+  KP                         XXXXXXXXXXX                      XXXXXXXXXX +HG L+PDE G+++ +S++FEAVL  ELEKV+ FY +T TDLGQQLGFLKAQLRGDGNK SQLALEDLTSWA+PMS+EDK+RAK L PKERELIETTL+RLNRE+TLLEN+CIINYTGFIKI+KKHDKLMPSRPLR ++LP+L+   FF+H RLE IK EVT IFAD+FCN+DKNQAAAMLLPKRFRTN+D+FLL LGYKLGVAATLALWVVWDCVVQVAKFGKPTIV KMAFPVFRAVGGLLLLHWCW I+EHFCN+LRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFPDWIPAG+YP+ L+ YT+YCLVFPW+QRKGIWW VGRV+ +P+VSVTLLDTVVAD+LTSLVKVLLDLAWSAFY+ SGDF+RDI G  D  P  WE SVLYSKVLAPV+VILP WWRFMQCLRRFYDTGNRWPHL NA KYA+AQTVTLFGAFH VYYH   + G GG V   LTYDV+WV+VTV+ST YSYVWDVTMDWGLGRPSK FLNDRRMCSS+VPYY+A+VADLFLRFLWVNTLIPPGSGGL SLPLYLNAFLMVMEILRR FWG+ RLENEQLRNTQGFRRVDVIPLSFSTE+QHEYRDPKNTNNL+VILEVS VAGLVIFLSIGAVVVADGIDEG
Sbjct:    1 MVNFTAKLQDNTRQEWLEHYVDYKALKRLLKPLKKG-APAKRASMMTSYNG-DASDSDEEATAPGDLVGGLKDRLHLLSMAGKSLGKPSKTGRKGGAGESASLLASEEKQLRSXXXXXXXXXXXKMAEEGLAT----------HXXXXXXXXXXXXXEHGCLTPDEVGQREVDSQRFEAVLLTELEKVQQFYAETITDLGQQLGFLKAQLRGDGNKGSQLALEDLTSWAHPMSEEDKRRAKHLAPKERELIETTLMRLNRELTLLENFCIINYTGFIKILKKHDKLMPSRPLRASVLPQLEKAQFFRHARLEDIKLEVTTIFADVFCNKDKNQAAAMLLPKRFRTNVDFFLLQLGYKLGVAATLALWVVWDCVVQVAKFGKPTIVTKMAFPVFRAVGGLLLLHWCWGIIEHFCNYLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFPDWIPAGFYPIFLLVYTLYCLVFPWKQRKGIWWIVGRVVVAPLVSVTLLDTVVADVLTSLVKVLLDLAWSAFYVISGDFTRDIRGAPDEVP-SWELSVLYSKVLAPVIVILPYWWRFMQCLRRFYDTGNRWPHLLNATKYAMAQTVTLFGAFHHVYYH--VRGGKGGRVHPSLTYDVVWVMVTVISTFYSYVWDVTMDWGLGRPSKGFLNDRRMCSSNVPYYSAMVADLFLRFLWVNTLIPPGSGGLFSLPLYLNAFLMVMEILRRMFWGVFRLENEQLRNTQGFRRVDVIPLSFSTENQHEYRDPKNTNNLRVILEVSFVAGLVIFLSIGAVVVADGIDEG 790          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: GAX14193.1 (hypothetical protein FisN_20Hh184 [Fistulifera solaris])

HSP 1 Score: 441.8 bits (1135), Expect = 4.500e-120
Identity = 284/841 (33.77%), Postives = 404/841 (48.04%), Query Frame = 0
Query:    1 MVNFSAKLQDNTRQEWAEHYIDYKALKKLLKPLKKGMLPKKGSSMIGHYGGAEASDSDEEPSTHHDFVSDIKERIIFITKGGKTKKPGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEHXXXXXXXXXXD----DHGLLSPDERGRKQGESEKFEAVLGMELEKVESFYEDTTTDLGQQLGFLK-----------------------AQLRGD-----------------------GNKSSQLALEDLTSWAYPMSDED-------KKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMPSRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKR-FRTNLDYFLLHLGYKLGVAATLALWVVWDCVVQVAKFGKPTIVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFPDWIPAGWYPLILVSYTVYCLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSRDIDGEVDAQPGDWETSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSFSTESQHEYRDPKNTNNLKVILEVSLV 784
            MV F  KL+DN  +EW+E+YI Y+ LKK+LK  K+                 + +D +E+     D  + I++    +  G  T                                                         G E           D           D      G + +F+  L  E+++V  FY     +L ++L FLK                        Q +G+                       G++ S  + ED T       DED        + A+++  KE + I+  LI   R   LL N+ I+NYTGF+KI+KK+DK +     +   +   D T     + +E     +  +FA+ FC+RD N+A A +LPK+     +D+  L LGY++G+ + LALWV WDC+  + + G  TI  + AFPVFR   GLLL+ W W          R+N++Y++DL P  V SP  IF+++V++++ YL  MLLYYK  V   P   PAG +P I V Y +Y L+FP + R  +W T+  V+++PM S     + + D+ TS+VKV  DLAW+  ++ SGDF    D +  A    W  +  Y ++L P++ + PLW+RF QCLRR+ DTGNR+PHL NA KYAL QTVTLFGAFH +Y     +S           + + W    V S+ YS+ WDV MDWGLGRP  RFL  R M      Y+  I  DL LRF WV TL+PP SG   +LP YL A  M++E+ RRT WG LRLENE   NT G+RRV  +PL F+T   H+Y   K      V++EV+ V
Sbjct:    1 MVEFGLKLEDNKVEEWSEYYIQYERLKKILKKCKEAR--------------QKCADLEEK---RPDEAATIRKA---VESGLSTPHQSSVNLPQLSEPTSSVNPLNKISEDSHHEPTSELSSLFHPLGTSPDESSGRYSSYGSESALTRAFSGVSDYFSRSFERQFRDALKEASGTANEFDEALDEEIKRVNDFYSSKMKELEERLIFLKESVKVARGQNADSVSDSDLTPLITQRKGESSILSLNAHTMENLAAAVRRRLTGSRKSYDSNEDSTQRLLGDEDEDIIDRNANPEDARKM--KEAQSIKRALIDEYRTAKLLHNFSIMNYTGFVKIVKKYDKTIKECQGKFKKVVTSD-TICNGGKDVEGFANRLEFLFANWFCDRDINEARAQMLPKKGDGLQMDWSQLRLGYRMGMCSVLALWVCWDCIWGMLQNGSTTIGGRTAFPVFRGFFGLLLVQWFWGASVWVWTRYRVNYIYIMDLDPHLVRSPIAIFNDSVDDTLFYLITMLLYYKAGVHDIPGNFPAGIFPAIAVCYALYRLIFPLQLRIPMWTTIWEVITAPMTSPAFYHSYIGDIFTSMVKVFQDLAWTTGFMLSGDFLISEDSK-RATNHTWSHASWYKQILIPLLTLAPLWFRFNQCLRRYMDTGNRFPHLANAFKYALTQTVTLFGAFHPLYMTNKHESA---------LFQLFWTCAFVSSSLYSFFWDVYMDWGLGRPEFRFLGPRLMYPRRKLYFVIIGLDLVLRFAWVLTLVPPESGAAFALPAYLTAVSMMLELFRRTVWGFLRLENEHRSNTAGYRRVGFVPLHFATGHTHDYNKAKEMRGTSVLIEVAFV 808          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: XP_024582795.1 (xenotropic and polytropic murine leukemia virus receptor xpr1 [Plasmopara halstedii] >CEG46426.1 xenotropic and polytropic murine leukemia virus receptor xpr1 [Plasmopara halstedii])

HSP 1 Score: 406.8 bits (1044), Expect = 1.600e-109
Identity = 255/647 (39.41%), Postives = 354/647 (54.71%), Query Frame = 0
Query:  176 FEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKL--MPSRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWDCVVQVAKFGKP------TIVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFP-DWIPAGWYPLILVSYTVY-CLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSRDIDGEVDAQPG---------DWET---SVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSF--STESQHEYRDPKNTNNLKV-ILEVSLVAGLVIFLSIGAVVV 798
            FE  L  E  KVE  Y      L +QL  L  Q R +   S+Q                             E ++  L+ L+R +TLL N+ ++NYTGF+KIIK++DK+   PS   R     +L    F + +R   + K +   FAD FC+ ++  A A L+ K+    +++  ++LG K+G    L +WV WD +V V  F          +V   A+PV+R +G LLLLHW   +  +     RIN+ Y+ +L+P+   S  ++F +A N +I+YL+ +LLYYKV+ G FP + +  G+YPL L  YT Y   + PW Q+ G+  TV  V+ SP+ SVT   T V D LTS VK+  D+ WS  +  + +F R      DA P          D +T   +V Y   + P+V +LPLWWRF+Q LRR YDT   WPHL NAAKYAL Q V LFG FH +  H S +        +   + V W+ +   S+ Y+++WDVTMDWGLGRP   FL D +M S    YYAAI+ADLFLRF W  TLIPP  G    LPLYL  F M++E+ RRTFW   RLENE LRNTQGFRRVD IPL +      +++ RD     + ++ IL++  V   V+ LS+ A+V+
Sbjct:  113 FEEALRHEYNKVEQAYIHHIAQLSEQLDILHKQYRENAPASAQ-----------------------------ESLKNALVELHRMLTLLHNFALLNYTGFVKIIKRYDKIASFPS-DQREEQKAQLQTFEFAKAQRCSDLLKRLEQSFADWFCDGNRTVAVATLMTKK-EDFVNWGHIYLGIKVGSCLILLIWVCWDSLV-VPTFHSNRHSHFIDLVRTRAYPVYRGIGCLLLLHWLVGLSLYVWRAARINYRYIFELNPRRAQSYPQVFSDATNMAIIYLSNILLYYKVVNGYFPEELLHRGYYPLALFVYTFYFYAIRPWGQQIGMLRTVWEVVCSPLYSVTFFHTFVGDYLTSTVKITQDVTWSVCFFATKEFLRK-----DAIPPNEGSFYSTLDEDTCANNVYYVNGVVPLVCVLPLWWRFLQNLRRVYDTKTWWPHLPNAAKYALTQVVVLFGLFHPL--HNSDED-----ALQARMFVVEWLFLFTASSLYAWIWDVTMDWGLGRPQFHFLADSQMFSHQWVYYAAIIADLFLRFAWTLTLIPP-RGAARWLPLYLQPFTMILELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHYDHGVGEENKKRDDVEQLDFRIFILKILAVLFTVLGLSVVAIVI 714          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: ETL84959.1 (hypothetical protein L917_15357 [Phytophthora parasitica])

HSP 1 Score: 403.7 bits (1036), Expect = 1.400e-108
Identity = 250/644 (38.82%), Postives = 353/644 (54.81%), Query Frame = 0
Query:  176 FEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMP-SRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWD-CVVQVAKFGKPT----IVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFP-DWIPAGWYPLILVSYTVY-CLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSR-DI------DGEVDAQPGDWE----TSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSFS---TESQHEYRDPKNTNNLKVILEVSLVAGLVIFLSIGAVVV 798
            FE  L  E   VE  Y   T  L +QL  L+AQ R +   ++Q                             E ++ +L+ L+R + LL N+ ++NYTGF+KI+K++DK+       R     KL    F + +R   + K +   FA+ FC+ + + A A L+ K+    +++  ++LG K G    L +WV WD  VV     G+      +V   A+PV+R +G LLLLHW   +  +     RIN+ Y+ +L+P+ V S  ++F +A N +IVYL  +LLYYKV+ G FP + +  G+YPL L  YT Y   + PW Q+ G+  T+  V+ SP+  V+   T V D LTS VKV  D++WS  +  + +F R D+         +   P D E     +V Y  V+ P+V  LPLWWRF+Q LRR YDT   WPHL NAAKYAL Q V LFG FH ++   S ++       R   + V W+++   S+ Y+++WDVTMDWGLGRP  +FL D +M S    YYAAIVADLFLRF W  TLIPP  G    LPLYL  F MV+E+ RRTFW   RLENE LRNTQGFRRVD IPL +     + + +  + +  +     L++  V   V+ LS+ A+V+
Sbjct:  114 FEEALEYEYGNVEHAYMRHTAQLAEQLEHLQAQYRENATATAQ-----------------------------ESLKNSLVELHRLLNLLHNFALLNYTGFVKILKRYDKIASFPADQREQQKTKLQTFEFAKAQRCSELLKRLEQSFANWFCDGNMHVAVATLMTKK-EDFVNWGHIYLGIKAGSCLILLIWVCWDSLVVPTFHSGRENHLLDLVRTRAYPVYRGIGCLLLLHWLVGVSLYVWRAARINYRYIFELNPRRVQSYPQVFSDATNMTIVYLANVLLYYKVVNGYFPEELLHRGYYPLALFLYTFYFYAIRPWGQQLGMLRTLWEVIWSPLYPVSFFHTFVGDYLTSTVKVTQDVSWSVCFFATKEFLRKDVIPPGSNASGLQFMPTDDEPTCADNVYYVNVVVPLVCALPLWWRFLQNLRRVYDTKTWWPHLPNAAKYALTQVVVLFGLFHPLHSDNSEENAS-----RVRMFVVAWLMLFTASSLYTWIWDVTMDWGLGRPQFKFLGDSQMFSRKWVYYAAIVADLFLRFAWTLTLIPP-RGAARWLPLYLQPFTMVLELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHYDHGVGDVEKKSEEVEQLDFRIFTLKILAVLFTVLGLSVVAIVI 721          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: XP_008911169.1 (hypothetical protein PPTG_15649 [Phytophthora parasitica INRA-310] >ETN03396.1 hypothetical protein PPTG_15649 [Phytophthora parasitica INRA-310] >ETO66852.1 hypothetical protein F444_16079 [Phytophthora parasitica P1976] >KUF95943.1 Xenotropic and polytropic retrovirus receptor 1 [Phytophthora nicotianae] >KUF96488.1 hypothetical protein AM588_10006709 [Phytophthora nicotianae])

HSP 1 Score: 403.7 bits (1036), Expect = 1.400e-108
Identity = 250/644 (38.82%), Postives = 353/644 (54.81%), Query Frame = 0
Query:  176 FEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMP-SRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWD-CVVQVAKFGKPT----IVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFP-DWIPAGWYPLILVSYTVY-CLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSR-DI------DGEVDAQPGDWE----TSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSFS---TESQHEYRDPKNTNNLKVILEVSLVAGLVIFLSIGAVVV 798
            FE  L  E   VE  Y   T  L +QL  L+AQ R +   ++Q                             E ++ +L+ L+R + LL N+ ++NYTGF+KI+K++DK+       R     KL    F + +R   + K +   FA+ FC+ + + A A L+ K+    +++  ++LG K G    L +WV WD  VV     G+      +V   A+PV+R +G LLLLHW   +  +     RIN+ Y+ +L+P+ V S  ++F +A N +IVYL  +LLYYKV+ G FP + +  G+YPL L  YT Y   + PW Q+ G+  T+  V+ SP+  V+   T V D LTS VKV  D++WS  +  + +F R D+         +   P D E     +V Y  V+ P+V  LPLWWRF+Q LRR YDT   WPHL NAAKYAL Q V LFG FH ++   S ++       R   + V W+++   S+ Y+++WDVTMDWGLGRP  +FL D +M S    YYAAIVADLFLRF W  TLIPP  G    LPLYL  F MV+E+ RRTFW   RLENE LRNTQGFRRVD IPL +     + + +  + +  +     L++  V   V+ LS+ A+V+
Sbjct:  114 FEEALEYEYGNVEHAYMRHTAQLAEQLEHLQAQYRENATATAQ-----------------------------ESLKNSLVELHRLLNLLHNFALLNYTGFVKILKRYDKIASFPADQREQQKTKLQTFEFAKAQRCSELLKRLEQSFANWFCDGNMHVAVATLMTKK-EDFVNWGHIYLGIKAGSCLILLIWVCWDSLVVPTFHSGRENHLLDLVRTRAYPVYRGIGCLLLLHWLVGVSLYVWRAARINYRYIFELNPRRVQSYPQVFSDATNMTIVYLANVLLYYKVVNGYFPEELLHRGYYPLALFLYTFYFYAIRPWGQQLGMLRTLWEVIWSPLYPVSFFHTFVGDYLTSTVKVTQDVSWSVCFFATKEFLRKDVIPPGSNASGLQFMPTDDEPTCADNVYYVNVVVPLVCALPLWWRFLQNLRRVYDTKTWWPHLPNAAKYALTQVVVLFGLFHPLHSDNSEENAS-----RVRMFVVAWLMLFTASSLYTWIWDVTMDWGLGRPQFKFLGDSQMFSRKWVYYAAIVADLFLRFAWTLTLIPP-RGAARWLPLYLQPFTMVLELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHYDHGVGDVEKKSEEVEQLDFRIFTLKILAVLFTVLGLSVVAIVI 721          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: ETI38081.1 (hypothetical protein F443_16094 [Phytophthora parasitica P1569] >ETK78301.1 hypothetical protein L915_15639 [Phytophthora parasitica] >ETL31731.1 hypothetical protein L916_15535 [Phytophthora parasitica] >ETM38128.1 hypothetical protein L914_15490 [Phytophthora parasitica] >ETP07966.1 hypothetical protein F441_15923 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 403.3 bits (1035), Expect = 1.800e-108
Identity = 250/644 (38.82%), Postives = 353/644 (54.81%), Query Frame = 0
Query:  176 FEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMP-SRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWD-CVVQVAKFGKPT----IVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFP-DWIPAGWYPLILVSYTVY-CLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSR-DI------DGEVDAQPGDWE----TSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSFS---TESQHEYRDPKNTNNLKVILEVSLVAGLVIFLSIGAVVV 798
            FE  L  E   VE  Y   T  L +QL  L+AQ R +   ++Q                             E ++ +L+ L+R + LL N+ ++NYTGF+KI+K++DK+       R     KL    F + +R   + K +   FA+ FC+ + + A A L+ K+    +++  ++LG K G    L +WV WD  VV     G+      +V   A+PV+R +G LLLLHW   +  +     RIN+ Y+ +L+P+ V S  ++F +A N +IVYL  +LLYYKV+ G FP + +  G+YPL L  YT Y   + PW Q+ G+  T+  V+ SP+  V+   T V D LTS VKV  D++WS  +  + +F R D+         +   P D E     +V Y  V+ P+V  LPLWWRF+Q LRR YDT   WPHL NAAKYAL Q V LFG FH ++   S ++       R   + V W+++   S+ Y+++WDVTMDWGLGRP  +FL D +M S    YYAAIVADLFLRF W  TLIPP  G    LPLYL  F MV+E+ RRTFW   RLENE LRNTQGFRRVD IPL +     + + +  + +  +     L++  V   V+ LS+ A+V+
Sbjct:  114 FEEALEYEYGNVEHAYMRHTAQLAEQLEHLQAQYRENATATAQ-----------------------------ESLKNSLVELHRLLNLLHNFALLNYTGFVKILKRYDKIASFPADQREQQKTKLQTFEFAKAQRCSELLKRLEQSFANWFCDGNMHVAVATLMTKK-EDFVNWGHIYLGIKAGSCLILLIWVCWDSLVVPTFHSGRENHLLDLVRTRAYPVYRGIGCLLLLHWLVGVSLYVWRAARINYRYIFELNPRRVQSYPQVFSDATNMTIVYLANVLLYYKVVNGYFPEELLHRGYYPLALFLYTFYFYAIRPWGQQLGMLRTLWEVIWSPLYPVSFFHTFVGDYLTSTVKVTQDVSWSVCFFATKEFLRKDVIPPGSNASGLQFMPTDDEPTCADNVYYVNVVVPLVCALPLWWRFLQNLRRVYDTKTWWPHLPNAAKYALTQVVVLFGLFHPLHSDNSEENAS-----RVRMFVVAWLMLFTASSLYTWIWDVTMDWGLGRPQFKFLGDSQMFSRKWVYYAAIVADLFLRFAWTLTLIPP-RGAARWLPLYLQPFTMVLELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHYDHGVGDVEKKSEEVEQLDFRIFTLKILAVLFTVLGLSVIAIVI 721          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: POM65962.1 (EXS domain containing hypothetical protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 402.5 bits (1033), Expect = 3.000e-108
Identity = 250/641 (39.00%), Postives = 347/641 (54.13%), Query Frame = 0
Query:  176 FEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMP-SRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWD-CVVQVAKFGKPT----IVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFP-DWIPAGWYPLILVSYTVY-CLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSR----DIDGEV----DAQPGDWETSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSF--STESQHEYRDPKNTNNLKVI-LEVSLVAGLVIFLSIGAVVV 798
            FE  L  E  KVE  Y   T  L +QL  L+AQ R D   ++Q                             E ++ +L+ L+R + LL N+ ++NYTGF+KI+K++DK+       R     KL    F + ++   +  +V   FAD FC+ + N A A L+ K+    +++  ++LG K G    L +WV WD  VV     G+      +V   A+PV+R +G LLLLHW   +  +     RIN+ Y+ +L+P+   S  ++F +A N +IV+L  +LLYYKV+   FP + +P G+YPL L  YT Y   + PW Q+ G+  T   V+ SP+  V+   T V D LTS VKV  D++WS  +  + +F R       GE     D        +V Y  V+ P+V  LPLWWRF+Q LRR YDT   WPHL NAAKYAL Q V LFG FH ++   + ++       R   + + W+ +   S+ Y++VWDVTMDWGLGRP  +FL D +M S    YYAAI+ADLFLRF W  TLIPP  G    LPLYL  F MV+E+ RRTFW   RLENE LRNTQGFRRVD IPL +        +  D     + +V  L++  V   V+ LS+ A+V+
Sbjct:  116 FEEALEYEYNKVERAYARHTAQLSEQLEHLQAQHREDAPATAQ-----------------------------ESLKNSLVELHRLLNLLHNFALLNYTGFVKILKRYDKIASFPTDQRKEQKAKLHTFEFAKAQQCSELLSQVEKSFADWFCDGNTNVAVATLMTKK-EDFVNWGHIYLGIKGGSCLILLIWVCWDSLVVPTFHNGRENHLIDLVRTRAYPVYRGIGCLLLLHWLVGVSLYVWRSARINYRYIFELNPRRAQSYPQVFSDATNMTIVFLANVLLYYKVVNSYFPEELLPRGYYPLALFLYTFYFYAIRPWGQQLGMLRTFWEVVWSPLYPVSFFHTFVGDYLTSTVKVTQDVSWSVCFFATKEFLRKDAIQPGGEFQLLQDPDEPTCADNVYYVNVVVPLVCALPLWWRFLQNLRRVYDTKTWWPHLPNAAKYALTQVVVLFGLFHPLHSDNNEENAS-----RVRMFVIAWLFLFTASSLYTWVWDVTMDWGLGRPQFKFLGDSQMFSRKWVYYAAIMADLFLRFAWTLTLIPP-RGAARWLPLYLQPFTMVLELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHYDHGVGDVEKADDEVEQLDFRVFTLKILAVIFTVLGLSVVAIVI 720          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: ETP36011.1 (hypothetical protein F442_15945 [Phytophthora parasitica P10297])

HSP 1 Score: 401.7 bits (1031), Expect = 5.200e-108
Identity = 249/644 (38.66%), Postives = 352/644 (54.66%), Query Frame = 0
Query:  176 FEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMP-SRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWD-CVVQVAKFGKPT----IVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFP-DWIPAGWYPLILVSYTVY-CLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSR-DI------DGEVDAQPGDWE----TSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSFS---TESQHEYRDPKNTNNLKVILEVSLVAGLVIFLSIGAVVV 798
            FE  L  E   VE  Y   T  L +QL  L+AQ R +   ++Q                             E ++ +L+ L+R + LL N+ ++NYTGF+KI+K++DK+       R     KL    F + +R   + K +   FA+ FC+ + + A A L+ K+    +++  ++LG K G    L +WV WD  VV     G+      +V   A+PV+R +G LLLLHW   +  +     RIN+ Y+ +L+P+ V S  ++F +A N +IVYL  +LLYYKV+ G FP + +  G+YPL L  YT Y   + PW Q+ G+  T+  V+ SP+  V+   T V D LTS VKV  D++WS  +  + +F R D+         +   P D E     +V Y  V+ P+V  LPLWWRF+Q LRR YDT   WPHL NAAKYAL Q V LFG FH ++   S ++       R   + V W+++   S+ Y+++WDVTMDWGLGRP  +FL D +M S    YYAAIVADLFLRF W  TLIPP  G    LPLY   F MV+E+ RRTFW   RLENE LRNTQGFRRVD IPL +     + + +  + +  +     L++  V   V+ LS+ A+V+
Sbjct:  114 FEEALEYEYGNVEHAYMRHTAQLAEQLEHLQAQYRENATATAQ-----------------------------ESLKNSLVELHRLLNLLHNFALLNYTGFVKILKRYDKIASFPADQREQQKTKLQTFEFAKAQRCSELLKRLEQSFANWFCDGNMHVAVATLMTKK-EDFVNWGHIYLGIKAGSCLILLIWVCWDSLVVPTFHSGRENHLLDLVRTRAYPVYRGIGCLLLLHWLVGVSLYVWRAARINYRYIFELNPRRVQSYPQVFSDATNMTIVYLANVLLYYKVVNGYFPEELLHRGYYPLALFLYTFYFYAIRPWGQQLGMLRTLWEVIWSPLYPVSFFHTFVGDYLTSTVKVTQDVSWSVCFFATKEFLRKDVIPPGSNASGLQFMPTDDEPTCADNVYYVNVVVPLVCALPLWWRFLQNLRRVYDTKTWWPHLPNAAKYALTQVVVLFGLFHPLHSDNSEENAS-----RVRMFVVAWLMLFTASSLYTWIWDVTMDWGLGRPQFKFLGDSQMFSRKWVYYAAIVADLFLRFAWTLTLIPP-RGAARWLPLYFQPFTMVLELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHYDHGVGDVEKKSEEVEQLDFRIFTLKILAVLFTVLGLSVIAIVI 721          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: CCI48870.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 399.4 bits (1025), Expect = 2.600e-107
Identity = 240/668 (35.93%), Postives = 352/668 (52.69%), Query Frame = 0
Query:  175 KFEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMPSRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWDCVVQVAKFGKPT------IVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFPDWI-PAGWYPLILVSYTVYCLVF-PWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDF-SRDIDGEV-----------------------DAQPGDWETSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFH----RVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSFSTESQHEYRDPKNTNNLKVI------LEVSLVAGLVIFLSIGAVVVADG 801
            +FE ++ ME EKVE+ Y+    +   Q   L +Q R + + ++                              E ++ +L+ L+R +  L N+ I+NYTGFIKI+KKHDKL+     +  +   L N  F   +  + +  ++   FA+ F + ++  A A L+ ++    + +  +++G K+G    L  WVVWD ++ V  F          +    A+PV+R +GGLLLLHW   +        RIN+ Y+ ++ P+   S  ++F+EA N +IV+L  +LLYYKV+   FP+ I   G+YPL+L  Y+ Y  V   WR  KG+W T+  ++ SP+  V+   T V D LTS VKV  DL+WS  +  S +F   D +G V                       D       T+  Y  V+ P++  LPLWWRF+Q LRR +DT   WP+  NA KYALAQ V LFG FH    +V+YH   QS           + ++WV +  +S+ Y++VWDV MDWGLGRP   +L DR M      YY AIVADLFLRF W  +L+PP +    +LPLYL  F MV+E+ RRTFW   RLENE LRNTQGFRRVD IPL +  +   E +     N +K +      +++ L+  LV+ LS+  +++  G
Sbjct:   89 EFEELIEMEYEKVENAYKRHLKEFSDQFDLLSSQYRSNASNTT-----------------------------TESMKYSLVELHRLLHQLHNFAILNYTGFIKILKKHDKLLQKSLRKQHIHQYLQNYSFSNAQECQQLIAKLETFFANCFTDGNRQVAMATLMTRK-EAFIHWGHIYIGVKIGSCLVLLTWVVWDSII-VPSFPSGNERHIIDLALTRAYPVYRGIGGLLLLHWLIGLSMFVWRTARINYRYIFEIDPRKSQSYTQVFNEATNMTIVFLLNVLLYYKVVNQNFPERILHRGYYPLLLFGYSFYFYVIRSWRAYKGLWKTILEIVCSPLFPVSFFHTFVGDYLTSTVKVNQDLSWSLCFFLSKEFLLPDSEGAVASSQRYFTSASEVTIFASERWRYDRVQHTCSTNYYYVNVVTPLICALPLWWRFLQSLRRIHDTQKWWPNFPNAIKYALAQVVALFGIFHPFYPQVFYH--IQS-----------FQIVWVFLFTISSLYTWVWDVGMDWGLGRPQYNYLGDRHMFGRLWVYYVAIVADLFLRFSWTLSLVPPNTSS--TLPLYLQPFTMVLELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHYE-QGVGEDKTEDRANRIKPMEAKIFWMKILLIIFLVLALSLAVILIEQG 709          
BLAST of NO17G01230 vs. NCBI_GenBank
Match: XP_002997578.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68593.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 397.5 bits (1020), Expect = 9.800e-107
Identity = 248/644 (38.51%), Postives = 351/644 (54.50%), Query Frame = 0
Query:  176 FEAVLGMELEKVESFYEDTTTDLGQQLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELIETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMP-SRPLRPALLPKLDNTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFLLHLGYKLGVAATLALWVVWD-CVVQVAKFGKPT----IVAKMAFPVFRAVGGLLLLHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTCMLLYYKVLVGGFP-DWIPAGWYPLILVSYTVY-CLVFPWRQRKGIWWTVGRVLSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSR-DI------DGEVDAQPGDWE----TSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAAKYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTCYSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNTLIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRVDVIPLSF--STESQHEYRDPKNTNNLKVI-LEVSLVAGLVIFLSIGAVVV 798
            FE  L  E  KVE  Y   T  L +QL  L+AQ R +   ++Q                             E ++ +L+ L+R + LL N+ ++NYTGF+KI+K++DK+       R     KL    F + +R   + K +   FA+ FC+ + + A A L+ K+    +++  ++LG K G    L +WV WD  VV     G+      +V   A+PV+R +G LLLLHW   I  +     RIN+ Y+ +L+P+ V S  ++F +A N +IVYL  +LLYYKV+ G FP + +  G+YPL L  YT Y   + PW Q+ G+  T+  V+ SP+  V+   T V D LTS VKV  D++WS  +  + +F R D+         +   P D +     ++ Y  V+ P+V  LPLWWRF+Q LRR YDT   WPHL NAAKYAL Q V LFG FH ++   S +     +      + + W+++   S+ Y+++WDVTMDWGLGRP  +FL D +M S    YYAAIVADLFLRF W  TLIPP  G    LPLYL  F MV+E+ RRTFW   RLENE  RNTQGFRRVD IPL +        +  D     + ++  L++  V   V+ LS+ A+V+
Sbjct:  118 FEEALEYEYSKVEYAYMRHTAQLAEQLEHLQAQYRENATATAQ-----------------------------ESLKNSLVELHRLLNLLHNFALLNYTGFVKILKRYDKIASFPADQREQQKVKLQTFEFAKAQRCSELLKRLEQSFANWFCDGNAHVAVATLMTKK-EDFVNWGHIYLGIKAGSCLILLIWVCWDSLVVPTFHNGRENHLLDLVRTRAYPVYRGIGCLLLLHWLVGISLYVWRAARINYHYIFELNPRRVQSYPQVFSDATNMTIVYLANVLLYYKVVNGYFPEELLHRGYYPLTLFLYTFYFYAIRPWGQQLGMIRTLWEVVWSPLYPVSFFHTFVGDYLTSTVKVTQDVSWSVCFFATKEFLRKDVIPPGGNASGLQFMPTDDDPTCADNIYYVNVVVPLVCALPLWWRFLQNLRRLYDTKTWWPHLPNAAKYALTQVVVLFGLFHPLHSDNSEEEHSSQV----RMFVIAWLMLFTASSLYTWIWDVTMDWGLGRPQFKFLGDSQMFSRKWVYYAAIVADLFLRFAWTLTLIPP-RGVARWLPLYLQPFTMVLELFRRTFWSFFRLENEHSRNTQGFRRVDFIPLHYDHGVGDVEKKSDEVEQLDFRIFTLKILAVLFTVLGLSVVAIVI 726          
The following BLAST results are available for this feature:
BLAST of NO17G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24292.10.000e+076.65xenotropic and polytropic murine leukemia virus re... [more]
GAX14193.14.500e-12033.77hypothetical protein FisN_20Hh184 [Fistulifera sol... [more]
XP_024582795.11.600e-10939.41xenotropic and polytropic murine leukemia virus re... [more]
ETL84959.11.400e-10838.82hypothetical protein L917_15357 [Phytophthora para... [more]
XP_008911169.11.400e-10838.82hypothetical protein PPTG_15649 [Phytophthora para... [more]
ETI38081.11.800e-10838.82hypothetical protein F443_16094 [Phytophthora para... [more]
POM65962.13.000e-10839.00EXS domain containing hypothetical protein [Phytop... [more]
ETP36011.15.200e-10838.66hypothetical protein F442_15945 [Phytophthora para... [more]
CCI48870.12.600e-10735.93unnamed protein product [Albugo candida][more]
XP_002997578.19.800e-10738.51conserved hypothetical protein [Phytophthora infes... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL157nonsL157Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR036ncniR036Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR030ngnoR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002899NSK002899Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01230.1NO17G01230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599956gene_7768Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100047g34gene6174Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01230.1NO17G01230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01230 ID=NO17G01230|Name=NO17G01230|organism=Nannochloropsis oceanica|type=gene|length=5849bp
AAAAGCGGGCGGAGGAGATGGCCTTCGGGTTGTGAAAAGAGGTAGATTTT
GGGTAAGAAAAAAGAAGGAGAACAGGGTACTGCGAGCTCCGCTTGCCTTG
CTCTGTGCAAGACTCCCAATGCCTGAATGAATGGGGGACAGAATGTAGGA
ATTCCGCGCCGCCGCTTCCGATCCTCCTCCTCCCTCCTCTCTCCCCTCCC
TTACACATCAATCACACACAATCCGTGACGCAGCGTGCTGCAACAGGCCA
TCAGGACATGGCATTATTAAACTTGGTGATTGCATGTACTTCCATGTCCT
TTCTATCATTATTATCGATTCGATTCATTAACCGGGCGAGAGATGCACGT
TCTGATCCGCTCCTTCCCTGCATCTCCAAAGACTCCAAAAAAGTCCCCGC
AGGAGAGCGCGCTGACGTTGACATCAGCGCAAGACAAGGCTACAAACGGC
GGGCAGAAATGTTCACGTAGTGCTGGGGGAAGAAGAGAGCAGCAGCGGCA
GCAACGGCAGTGACGGCAGGCAGCGGAGCGAGGAGAGCAGTCAACGACAT
AACGTATCAAGAAGCCTTGAGCATTTGACATCCAGTGGTAAAAATAAAAG
TAGCTCAAAGGCCAACAATAAAACGGCGCTTCTAGTTCTGCAACGCGGAG
AGGCAGCAGGAGCAGCAGGAGTAGCAGGAGCAGCAGAAGGTGGCCCCACC
CTACCTTGTTGACTCCTGATCGGAAAGCATGGTGAACTTCAGCGCCAAGC
TCCAAGACAACACCCGCCAAGAATGGGCGGAGCACTACATCGACTACAAA
GCACTCAAAAAACTCCTCAAACCCCTAAAAAAAGGCATGCTTCCCAAAAA
AGGCAGCAGCATGATAGGCCACTACGGAGGAGCTGAGGCGTCAGATTCCG
ACGAAGAACCCTCCACCCATCACGACTTCGTCAGTGACATCAAAGAGCGA
ATAATTTTCATCACAAAAGGAGGCAAGACTAAAAAGCCAGGAGTAGCAGT
AGTGACCCCTACGAGGGGGGGAGCGGCTGGAGAGGCAGAGGAACAGAAAC
CCTTGCTTCTCACTCAAGACCAGCAGCCGGGTAATCTCTTTTATGGAGGA
GGGGGAGCAGCAGCACGGCCTCCAACGACCGCAACAGAGGAGGGTTTAGC
GGGGAAAGAGCATGAGAAGGGGGAGGAAGGGGAGGAAGAAGGGGACGACC
ATGGTTTGTTGTCGCCGGATGAAAGGGGGAGGAAGCAAGGTGAGAGTGAG
AAGTTTGAGGCGGTGCTGGGTATGGAGCTGGAGAAAGTAGAAAGCTTTTA
CGAGGATACGACGACGGATTTGGGACAGCAACTTGGATTCCTGAAGGCGC
AGTTGAGGGGAGATGGGAATAAGAGTAGTCAGCTGGCTTTAGAGGATCTG
ACAAGTTGGGCTTATCCCATGAGTGATGAAGACAAAAAGCGCGCCAAGCA
GCTAGGACCGAAAGAGAGGGAACTCATCGAGACAACCCTGATACGGCTGA
ATCGAGAGATGACGCTTCTGGAGAACTACTGCATCATCAACTACACGGGG
TTCATCAAAATCATAAAAAAACACGACAAGCTCATGCCATCCCGCCCGCT
CCGTCCCGCTCTTCTCCCTAAGTTGGACAATACCCCTTTCTTCCAGCATG
AGCGCTTGGAGGCGATCAAGAAGGAGGTGACAGCGATTTTTGCCGATATT
TTTTGTAACCGGGACAAAAACCAGGCGGCCGCCATGCTATTGCCGAAGCG
CTTCCGAACGAACCTGGACTACTTCCTCCTCCACCTTGGGTATAAACTAG
gtacgccacacgctcctatccaccgcgctctccttcctcccaccctgttt
gcatcctaaggggatagtgccgtgtcactgaattctgaaaacccactatc
ccgaacttcctccctccctccctccttccttccagGGGTCGCCGCCACGC
TCGCTCTTTGGGTGGTGTGGGACTGTGTCGTCCAAGTTGCCAAATTCGGA
AAGCCCACCATTGTGGCCAAAATGGCCTTCCCTGTCTTTCGAGCCGTGGG
GGGGTTGTTGCTTTTGCACTGGTGTTGGGCGATCCTCGAGCATTTCTGCA
ATCATTTACGGATTAATTTCGTGTATTTGCTTGATCTGTCCCCTAAGAAT
GTGTCGAGCCCGCGAAAGATCTTCGATGAGGCGGTGAATGAGTCGATTGT
GTATTTGACGTGTATGCTTTTGTACTACAAGGTGCTGGTGGGTGGATTCC
CTGACTGGATTCCTGCGGGATGGTACCCCCTTATCCTGGTGTCTTATACC
GTGTACTGCCTGGTCTTCCCCTGGAGGCAACGGAAGGGGATATGGTGGAC
TGTGGGGAGGGTGCTGTCGAGCCCAATGGTGAGTGTGACGTTGCTTGATA
CTGTAGTCGCGGATATGTTGACGAGTCTGGTTAAGGTCTTGCTAGATCTG
GCTTGGTCGGCCTTCTACATATGTTCGGGGGATTTTTCGAGGGATATCGA
CGGGGAGGTGGATGCCCAACCCGGGGATTGGGAGACTAGTGTGTTGTACT
CGAAGGTACTGGCGCCCGTAGTTGTGATTTTGCCGTTGTGGTGGCGGTTT
ATGCAATGTTTGAGAAGGTTTTACGACACGGGAAATAGGTGGCCGCACTT
GTTCAACGCAGCCAAGTATGCCTTGGCCCAGACAGTGACGCTGTTTGGGG
CGTTCCATCGTGTGTATTATCATGGGAGCTTTCAGAGTGGAGGGGGAGGG
ATTGTGCGGCGGGGGCTGACGTATGATGTGCTGTGGGTGATTGTGACGGT
GGTGAGTACATGTTACTCGTATGTATGGGATGTGACGATGGATTGGGGCT
TGGGGAGACCAAGTAAGCGCTTCTTGAATGATCGGAGAATGTGTTCGAGT
GATGTGCCCTATTATGCGGCGATTGTCGCGGATTTATTCCTGAGGTTCTT
GTGGGTGAATACCTTGATTCCTCCTGGATCGGGTGGGTTGTTGTCGCTGC
CGCTTTATTTGAATGCGTTTCTGATGGTCATGGAGATATTACGACGGACG
TTCTGGGGGATCCTGAGGCTGGAGAATGAGCAACTGAGGAACACCCAGGG
CTTCAGGCGGGTGGATGTGATACCTTTGTCCTTCTCGACGGAGAGCCAGC
ATGAGTATCGGGACCCGAAGAACACGAATAATTTAAAAGTCATCCTGGAG
GTGAGCCTCGTTGCGGGGCTGGTGATCTTCCTGTCAATTGGTGCGGTAGT
GGTGGCGGATGGGATCGATGAGGGCACATAGATCCATCCTCCCTCAGTCC
CCCCCTCACTTCCGTGACCGAGAGTCAGGCTGAGTACTGGCATCCGAAGA
ATACGAATAACGTGAATGCTGTTTAAGAGATGAGCGTTTTGACGGGCTTG
GTGAACTGTTACGTGGTGGTGGCGGATGATATTGTTAAAGGAGCGTAGTG
ATTGAAGGGGGTGGGGAGGGACGGAGGGAAGGAGGGAGGCAGGGAAGGGA
AGGGTGGCCTTTGCACGCCACCCCGAGGATTCATGTTTTGAATGAATCAA
AAGTTGCGTATGTTGATAGATGAGAAACGTCAGAGGGCATAAAGCATTCA
TAAGGAAGAATAGAGTAGGGATGGGGGAGAGAAGACACCTTTGGCAGCTG
GCAAAGAAAGGAATGGAATGAGTAGAGTTGTTTTGGACGGAAGAGCGAGG
AAGAGCGAGAGAGCAAAGAAAGAGATAGTGCGCGACAGAAAGAGAGAGAC
CCTAACCCTGCGCGACAGATGTATAAATAGAAGAAGTATTCTCAGCACAA
CAGAGAGAAGAGACAAGTCTCGTCGAAGAAACGAAGAGGGAAACTACATG
ATAGAACGAAGGCGAGGACGGGGAGGAGGACCAGGATGAGTGGGCGACAG
GAGCCCATCAAAGAGAATGGGGGAAAGCAAGAAAACTCAAACATGCCATA
GGAATAAGAAACAACAAATAATCGAAAACCATTGAGCGCGGTGATGGTAG
TGACTCCGCTCGTTTTCAGTTATGTAAAGGTACACATACGAGTTCAATTA
CATTTTTTTGTGTCTTGTGCTTTTGACACACCATTCACTTAATTGTCCTT
CCCTCCATCCCTCCGTACTAACTGTCACCCTTCTCCTCTGTTCAACGGCA
CCATGTCCACAGCCACCATTCCTCCCTTCCTCCTCCCCTCCCATCCACCT
TCCGCCTCAAAAGCATACGCAGTGAGCGACCTCTCCACCCTCGCCAGCAC
CTCCCCAACCCCCGGCCTCTTCCTGGGATCCTGCTCCAACATCCATACAA
CGATCTCTACCACTCCCTCCGAATAGCCATGTCGCGCCGGCCAGGGTATC
TTGCCGATAACCCGTAGAAAAGTACACTCCACCACCCGTGGCCTTTCTCC
CTCCCTCGCCCCTCCATTCTCAGTGAATTCAACCTCGAAGGGGGAATAAC
CAAACATGAGCGCAAATAGCAAGCAGCCCAGCGACCACACATCCACTTTG
GCGTCTAAACACGCATCACTACTAACGTCGAATAGTTCCGGTGCTCGGAA
TGTCATCGTGGAATGCTGTGTGGCTTCCTCCTGTATCAACAGCGCCTCTG
ACCTATTCTCCACTCTCCGATCCGCCGGCATCATGGAACCAAAATCAATG
AGAATAGGCGTTGTTCCATCGGCTTTTAGTAGCACATTTTCGGGTTTTAT
GTCCCGGTGGGCTAGGGCTGGTTTGTGTTCGTGCAGCGCTTGGACGCCTA
GGAGAACCCCATGAAACAAACGGAGTAAAGCCGCTTCAGGCCATGTCCCC
ATCACGCCCGTGGTCATCAAAGGCCGCAAAATCCTCTTATCGATCTCATC
TCTTAGGGAACCGCCTGATATGTAAGGAAAGAGGAGGTAGGCATAGATGC
CCGTGCTGCTGCTTGGGACGGGGTGCTGCTGATGCACGCGACTGTCAATC
AGGGGCAAAAGGTTGGGGTGTCGCAGCTCCCGGTGGTAAAAAATTTCACG
TTTGGCAGCTTCGAGTTGCTCTCGTACTTGGCATAGCATCTTTTTCAGAG
CGTACACTTCGCCTGTGTGAGCGTCCTGAGCGAGGTAGACGTACCCAAAC
CCACCCTCGGCCAACTGTTTTTTGATGCGCACGCGTCGCCCACCATCCAA
CGCCACGGAGCTCGGCCACAGTGCCTCCTGCAGCCAGGCCAGCAGCGCCT
TTACAGCATCGAGCAACACGTGGAAGAAGCCTTCGAAGGACTGCAGCATA
CTAATTAAAACGAGGCGGAAATAATGGTGGCGGCGCCGGCCGTGGTAATG
CTGCGGAAGAGGTGAATGGGAGGGAAACACGGACTGACTGACGACAGGAT
AAGCAAGCGCCGTCGTCGTAGCTGTCTTCTTTGGTCTAGCTCCGGGAGTC
TGTTCAGAGTGATTGTGTCGGTCTGGTGGTTGAGTTTAGTACGGCCGTAT
GTATGGAAGGAACTCGCCCAAGATGCCTCAACGCGCAAGTCTACGCAAGC
CATGTCCTGACCCTCAAAACAATTGTGCCACACACTCATAGTTCGCCCGG
AATACCCTTAACAGCATTATCAGCATGAACGACAAGCCCGCTCTGGACTG
GGCGGACCCCGTTACCCTGGGCCTTGCCATGTTTGCTGTCTTTTACGTCG
TCACAATCATTCTCGCCTTACTCGCTTACCGACCCTCAAAACAATTGTGC
CACACACTCATAGTTCGCCCGGAATACCCTTAACAACATTATCAGCATGA
ACGACAAGCCCGCTCTGGACTGGGCGGACCCCGTTACCCTGGGCCTTGCC
ATGTTTGCTGTCTTTTACGTCGTCACAATCATTCTCGCCTTACTCGCTT
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protein sequence of NO17G01230.1

>NO17G01230.1-protein ID=NO17G01230.1-protein|Name=NO17G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=806bp
MVNFSAKLQDNTRQEWAEHYIDYKALKKLLKPLKKGMLPKKGSSMIGHYG
GAEASDSDEEPSTHHDFVSDIKERIIFITKGGKTKKPGVAVVTPTRGGAA
GEAEEQKPLLLTQDQQPGNLFYGGGGAAARPPTTATEEGLAGKEHEKGEE
GEEEGDDHGLLSPDERGRKQGESEKFEAVLGMELEKVESFYEDTTTDLGQ
QLGFLKAQLRGDGNKSSQLALEDLTSWAYPMSDEDKKRAKQLGPKERELI
ETTLIRLNREMTLLENYCIINYTGFIKIIKKHDKLMPSRPLRPALLPKLD
NTPFFQHERLEAIKKEVTAIFADIFCNRDKNQAAAMLLPKRFRTNLDYFL
LHLGYKLGVAATLALWVVWDCVVQVAKFGKPTIVAKMAFPVFRAVGGLLL
LHWCWAILEHFCNHLRINFVYLLDLSPKNVSSPRKIFDEAVNESIVYLTC
MLLYYKVLVGGFPDWIPAGWYPLILVSYTVYCLVFPWRQRKGIWWTVGRV
LSSPMVSVTLLDTVVADMLTSLVKVLLDLAWSAFYICSGDFSRDIDGEVD
AQPGDWETSVLYSKVLAPVVVILPLWWRFMQCLRRFYDTGNRWPHLFNAA
KYALAQTVTLFGAFHRVYYHGSFQSGGGGIVRRGLTYDVLWVIVTVVSTC
YSYVWDVTMDWGLGRPSKRFLNDRRMCSSDVPYYAAIVADLFLRFLWVNT
LIPPGSGGLLSLPLYLNAFLMVMEILRRTFWGILRLENEQLRNTQGFRRV
DVIPLSFSTESQHEYRDPKNTNNLKVILEVSLVAGLVIFLSIGAVVVADG
IDEGT*
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Synonyms
Publications