NO17G01110, NO17G01110 (gene) Nannochloropsis oceanica

Overview
NameNO17G01110
Unique NameNO17G01110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4110
Alignment locationchr17:347103..351212 +

Link to JBrowse

Properties
Property NameValue
DescriptionPentatricopeptide repeat-containing protein chloroplastic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:347103..351212 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
Homology
BLAST of NO17G01110 vs. NCBI_GenBank
Match: EWM24279.1 (pentatricopeptide repeat-containing protein chloroplastic [Nannochloropsis gaditana])

HSP 1 Score: 792.0 bits (2044), Expect = 2.800e-225
Identity = 607/1111 (54.64%), Postives = 731/1111 (65.80%), Query Frame = 0
Query:  154 EAVQADWRQPIGSSSSSFGRGSQRTRPTGILPSIISPPLPAPTAGELGHQQVLPENAPARASIVAAMARGEPATVVELVQQLGVEGVYRLDLPLACRLVDACVHTRAWHLVIEGLCPCPAFPMDHRVCLHILQACSRMKSWQPVLALLRKSMPLRGVPLTAEVYRAALVACGRCHEAGEVRKLLEEMQARRFLNIRNMRDMHALVLEAAGADGWDAALMVCQQYF-----GIAASGKARGVGYNKRIAAVVAAAAEPVSQETSVLEGEMLEATIEVCRRTLREAHRKNERAMLVRMHDRLWGVVREARRTRGVELSKGAWASLIQVGSKAGKTYDVSSMMEAMVAEDVEGESRLGERARWRKVALQRCWVSNDWVGARRVLEEMWKKREREASPQSDGLLHLVMSCGLKGGMEREALQLFEAWWDADLTFSPDTRCRILATRCALRLAHLPVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVEYSTAPATGLVPLGSLLDRFDKRAPGQKVIVCNMVMEHVRVKGLIREGLSFLDAMRALHIPRKSLTLLPLLKLCASSGRVQEMVTLVEEMKDKDHVAPTAHMYSQTIEAAASAGMVDEALRLFATMNAEGVAVSEGSCIDLMAALARNGDWSRALDLLQDVRACTKRPPTCIIYTTAVNACGNGGAWEMALMLMKRMEEEGIA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLWDMLEYTDSTSLNQPTLNSLICSMEHPALLPTMAWYYKRAYERGRVNHWSIQFFRVMDLHNFSRPLSKAALYHVLTSMLRKYGPEITKDANRRS--EELTTAATAATATAARPFTEKMARGTFKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSPSEMYLPWPRNQSRHGYIQDPRDPLIIVTGHGRRRAAGTSILRDDVSEFLKSEFRPSLPTETVPYNPGRLLVPSQSLLAYVRA 1257
            E  QA WR      +     G QR RP  ++    SP        +L  +Q+LP++APAR +++ A+  G   T V+++QQL  EGVY LD PLAC+LVD CV ++AW +V+  L PCPAFPMD  +C +IL+AC R + W+P LAL+R  MP RG+  T E Y   L+ CGRC EAGEV +LLEEM ARR L   + +DM  L ++AA A  W+A L+VCQ+Y      G    G+    G  +R     A      S     LE EM+EATI  C+R LREAHR NE A+L RM  RLW +V+E +R RG+EL + AW SL+ V SKAG T  +S MM+A VA D   +S  G  A+ R  AL+RCWV  DW  AR +L        RE+ P+SD L+ +V+ CGL+G +E+EAL +F AWWDAD +FSP +RCR+ A R AL+LA +  +                                                   E +   ++GL  L  LLDRF++RAP Q+ IVCNMVMEH RV  L+ EG +FL+AMRAL IPR+S TL PLLKLC+S+ R +++V LV EM +KD + P A  YSQ IEAA  A MV+EAL+LF TM AEG    +  C DLMAALARNGDWSRALDLLQD+R  TKRPP CI+YT AVNACGNGGAWEMALMLM+RMEEEGIA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              AYLWD++E  D   LNQPTLNSLIC+MEHPAL   +A +Y+RAY++G+VNHWS+ F+RV+DLHNFSRPL+KAAL+HVL  ML K+GP + +D +  S  EE+ T       + A PF                                       WS SEMYLPWPRN++RHGY+QDPRDPL+IVTGHGR+RAAGTS+LRDD+++FL SEF P L T+T+PYNPGRLLVPS +LL Y+ A
Sbjct:  125 ENSQAGWRCAPTGVNKGVALG-QRARPQQVILR-QSPASSGTVVKDL--RQILPDDAPARTAMLKALEGGHVGTCVQVLQQLSAEGVYSLDKPLACQLVDKCVESKAWPVVMNSLLPCPAFPMDTGMCSYILEACLRARRWRPALALVRSRMPSRGLQPTREAYEGVLMVCGRCQEAGEVLRLLEEMHARRLLETGSAKDMRDLAVKAAAAGAWEAGLIVCQEYLRTVPGGTVGKGERFLPGMRQR-GRTPAPEVPRWSASVVELEAEMVEATILACQRDLREAHRMNEHALLSRMCTRLWELVQEMQRRRGLELGRRAWDSLVHVCSKAGNTQLISQMMDA-VAVDERVDS--GHWAQ-RHAALRRCWVDRDWARARALLGSFLASCGRESPPESDELVTMVLDCGLRGDLEQEALAVFNAWWDADPSFSPSSRCRVKAVRTALKLARVSSA--------------------------FPSLSVTPPRDSNSLDSLRIQVGATEEARIGSSGLQGLADLLDRFERRAPSQRAIVCNMVMEHARVHRLVEEGFAFLEAMRALDIPRQSATLQPLLKLCSSANRQRDVVRLVGEMVEKDKLKPQAQTYSQVIEAATRADMVEEALKLFQTMIAEGFPAGDKECTDLMAALARNGDWSRALDLLQDIRVYTKRPPACIVYTAAVNACGNGGAWEMALMLMRRMEEEGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMLTSRDGSSHVCYMLAVDACRRSDQWPVAAYLWDLIELVDPKELNQPTLNSLICAMEHPALHSLVASFYQRAYDKGQVNHWSVAFYRVVDLHNFSRPLAKAALHHVLECMLEKHGPGVARDLSIVSDGEEMGTKEEKGFRSTA-PFQSLSGE-------------------IPCDPAISTQTDKKWSASEMYLPWPRNKARHGYVQDPRDPLVIVTGHGRKRAAGTSVLRDDIADFLASEFDPPLTTKTMPYNPGRLLVPSSTLLTYLLA 1180          
BLAST of NO17G01110 vs. NCBI_GenBank
Match: XP_005856213.1 (hypothetical protein NGA_2036000, partial [Nannochloropsis gaditana CCMP526] >EKU20146.1 hypothetical protein NGA_2036000, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 456.8 bits (1174), Expect = 2.100e-124
Identity = 397/601 (66.06%), Postives = 452/601 (75.21%), Query Frame = 0
Query:  659 ATGLVPLGSLLDRFDKRAPGQKVIVCNMVMEHVRVKGLIREGLSFLDAMRALHIPRKSLTLLPLLKLCASSGRVQEMVTLVEEMKDKDHVAPTAHMYSQTIEAAASAGMVDEALRLFATMNAEGVAVSEGSCIDLMAALARNGDWSRALDLLQDVRACTKRPPTCIIYTTAVNACGNGGAWEMALMLMKRMEEEGIA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLWDMLEYTDSTSLNQPTLNSLICSMEHPALLPTMAWYYKRAYERGRVNHWSIQFFRVMDLHNFSRPLSKAALYHVLTSMLRKYGPEITKDANRRS--EELTTAATAATATAARPFTEKMARGTFKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSPSEMYLPWPRNQSRHGYIQDPRDPLIIVTGHGRRRAAGTSILRDDVSEFLKSEFRPSLPTETVPYNPGRLLVPSQSLLAYVRA 1257
            ++GL  L  LLDRF++RAP Q+ IVCNMVMEH RV  L+ EG +FL+AMRAL IPR+S TL PLLKLC+S+ R +++V LV EM +KD + P A  YSQ IEAA  A MV+EAL+LF TM AEG    +  C DLMAALARNGDWSRALDLLQD+R  TKRPP CI+YT AVNACGNGGAWEMALMLM+RMEEEGIA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              AYLWD++E  D   LNQPTLNSLIC+MEHPAL   +A +Y++AY++G+VNHWS+ F+RV+DLHNFSRPL+KAAL+HVL  ML K+GP + +D +  S  EE+ T       + A PF                                       WS SEMYLPWPRN++RHGY+QDPRDPL+IVTGHGRRRAAGTS+LRDD+++FL SEF P L T+T+PYNPGRLLVPS +LL Y+ A
Sbjct:   48 SSGLQGLADLLDRFERRAPSQRAIVCNMVMEHARVHRLVEEGFAFLEAMRALDIPRQSATLQPLLKLCSSANRQRDVVRLVGEMVEKDKLKPQAQTYSQVIEAATRADMVEEALKLFQTMIAEGFPAGDKECTDLMAALARNGDWSRALDLLQDIRVYTKRPPACIVYTAAVNACGNGGAWEMALMLMRRMEEEGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMLTSRDGSSHVCYMLAVDACRRSDQWPVAAYLWDLIELVDPKELNQPTLNSLICAMEHPALHSLVASFYQQAYDKGQVNHWSVAFYRVVDLHNFSRPLAKAALHHVLECMLEKHGPGVARDLSIVSDGEEMGTKEEKGFRSTA-PFQSLSGE-------------------IPCDPAISTQADKKWSASEMYLPWPRNKARHGYVQDPRDPLVIVTGHGRRRAAGTSVLRDDIADFLTSEFDPPLTTKTMPYNPGRLLVPSSTLLTYLLA 628          
BLAST of NO17G01110 vs. NCBI_GenBank
Match: PON32395.1 (DYW domain containing protein [Parasponia andersonii])

HSP 1 Score: 66.6 bits (161), Expect = 6.200e-7
Identity = 53/205 (25.85%), Postives = 84/205 (40.98%), Query Frame = 0
Query:  652 VEYSTAPATGLVPLGSLLD--RFDKRAPGQKVIVCNMVMEHVRVKGLIREGLSFLDAMRALHIPRKSLTLLPLLKLCASSGRVQEMVTLVEEMKDKDHVAPTAHMYSQTIEAAASAGMVDEALRLFATMNAEGVAVSEGSCIDLMAALARNGDWSRALDLLQDVRACTKRPPTCIIYTTAVNACGNGGAWEMALMLMKRMEEEGI 855
            +  + A  T     G+L D  R   R P    +  N ++      G+  E LS  + M   +I   S+T + +L  CA +G+V+E       MK+K  + P    YS  I+    AG +DEA +L   M     ++   S   L+ A  ++G+ + A      V      P   + Y    N   N G WE    + K M + G+
Sbjct:  381 ISVNNAIVTMYSKCGNLTDARRLFDRMPEHNAVSLNSMIAGYAQHGIGIESLSLFEKMLQTNIIPTSITFISVLSACAHTGKVEEGQKYFSMMKEKFGIEPEEEHYSCMIDLLGRAGKLDEAEKLIEKMPFSPGSIGWAS---LLGACRKHGNMALAQKAADQV--LRLEPSNAVPYVVLANMYANAGRWEEVATIRKLMRDRGV 580          
BLAST of NO17G01110 vs. NCBI_GenBank
Match: PON92170.1 (DYW domain containing protein [Trema orientalis])

HSP 1 Score: 66.2 bits (160), Expect = 8.200e-7
Identity = 51/191 (26.70%), Postives = 81/191 (42.41%), Query Frame = 0
Query:  666 GSLLD--RFDKRAPGQKVIVCNMVMEHVRVKGLIREGLSFLDAMRALHIPRKSLTLLPLLKLCASSGRVQEMVTLVEEMKDKDHVAPTAHMYSQTIEAAASAGMVDEALRLFATMNAEGVAVSEGSCIDLMAALARNGDWSRALDLLQDVRACTKRPPTCIIYTTAVNACGNGGAWEMALMLMKRMEEEGI 855
            G+L D  R   R P    +  N ++      G+  E L   + M   +I   S+T + +L  CA +G+V+E       MK+K  + P A  YS  I+    AG +DEA +L   M     ++   S   L+ A +++G+ + A      V      P   + Y    N   N G WE    + K M + G+
Sbjct:  395 GNLNDARRLFDRMPEHNAVSLNSMIAGYAQHGIGMESLCLFEKMLRTNIIPTSITFISVLSACAHTGKVEEGQKYFSMMKEKFGIEPEAEHYSCMIDLLGRAGKLDEAEKLIEKMPFSPGSIGWAS---LLGACSKHGNMALAQKAADQV--LRLEPSNAVPYVVLANMYANAGRWEEVATVRKLMRDRGV 580          
The following BLAST results are available for this feature:
BLAST of NO17G01110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 4
Match NameE-valueIdentityDescription
EWM24279.12.800e-22554.64pentatricopeptide repeat-containing protein chloro... [more]
XP_005856213.12.100e-12466.06hypothetical protein NGA_2036000, partial [Nannoch... [more]
PON32395.16.200e-725.85DYW domain containing protein [Parasponia anderson... [more]
PON92170.18.200e-726.70DYW domain containing protein [Trema orientalis][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL157nonsL157Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR036ncniR036Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR030ngnoR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002914NSK002914Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01110.1NO17G01110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600005gene_7781Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100020g78gene6188Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01110.1NO17G01110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01110 ID=NO17G01110|Name=NO17G01110|organism=Nannochloropsis oceanica|type=gene|length=4110bp
ATGATGACGACATGGACCTTTAACCGCCAGAGCGAGGAGGACTCCTCGGA
GGCAGATGGAGGGCTCCTCCTTTCGGTCACTTCAACGGACTGTACGCACT
ACGACCCCACACATAACAACAAACACTACAGATACATTGTCAGAGGTCTT
ATTGCTCTGTGTGATCGAGCGTCAGACAGTCACTCCAGTGTCACCGAGCC
CGGCTTCTGCTTCGACGAGTACGTGGCTCATCAGTATCTCAATTATCATC
CGCTCCATCACACTCAGGCGATGCGACAACGATGCGCCGTGTTGCCCCTA
TGTGCGGGCAGAAGGAGGGCCATTAGCAGCAGTAGCAGCAGCAGTAGTAG
TAGTAGCAGTAGTAGCCGTAGCGCCGCTCAAAGGGGAGGTTACCAACGCA
GTGCTGCGGCCTCGACCGCACGTCCCATCCAGCCACCACGACCACGAGCC
GACATCCCCGAAGCCGTTCAGGCAGACTGGCGCCAGCCAATAGGTAGTAG
CAGCAGTAGCTTTGGGAGGGGATCTCAGCGCACGCGACCGACAGGAATTT
TGCCTAGCATAATATCGCCGCCACTGCCTGCCCCTACTGCTGGCGAATTA
GGGCACCAGCAGGTATTGCCTGAGAATGCCCCGGCGCGGGCTTCGATCGT
AGCAGCTATGGCACGAGGGGAGCCAGCTACGGTGGTGGAGTTGGTGCAGC
AGCTGGGCGTGGAGGGTGTATACCGATTAGACTTGCCGTTGGCGTGCCGT
TTGGTGGATGCATGTGTTCATACAAGGGCATGGCATTTGGTCATTGAGGG
GTTATGTCCTTGCCCTGCCTTTCCCATGGATCATCGCGTGTGTTTGCATA
TCTTGCAGGCATGTTCCCGCATGAAGAGCTGGCAGCCGGTGTTGGCGTTG
TTGAGAAAGAGCATGCCTTTGCGGGGAGTTCCCCTCACAGCTGAAGTTTA
TCGAGCGGCGCTTGTGGCCTGTGGACGCTGTCATGAAGCAGGAGAGGTGC
GGAAGTTGTTGGAGGAGATGCAAGCTCGTCGTTTTTTGAACATAAGGAAC
ATGAGAGATATGCATGCCTTGGTGCTGGAAGCTGCGGGGGCGGATGGGTG
GGATGCTGCTTTAATGGTTTGTCAGCAGTATTTTGGGATTGCGGCCTCAG
GGAAGGCAAGAGGGGTGGGGTATAATAAGAGGATTGCTGCTGTAGTTGCT
GCGGCTGCTGAACCAGTATCACAAGAAACCTCAGTGTTGGAAGGGGAGAT
GCTTGAAGCTACCATAGAGGTGTGTCGAAGGACGTTGAGAGAGGCGCACA
GGAAAAACGAGAGGGCGATGTTGGTGCGGATGCATGACAGATTGTGGGGG
GTAGTGCGAGAGGCTAGAAGGACACGAGGGGTGGAGTTGAGTAAAGGAGC
ATGGGCAAGCTTGATTCAGGTCGGGTCGAAAGCGGGAAAGACGTACGACG
TCTCGTCGATGATGGAGGCGATGGTGGCGGAAGATGTTGAGGGGGAGTCG
AGGCTTGGAGAGAGAGCGCGATGGAGGAAGGTTGCATTGCAACGTTGTTG
GGTGAGCAATGACTGGGTTGGGGCGAGGAGGGTGTTGGAAGAGATGTGGA
AAAAGAGGGAGCGCGAGGCGTCGCCGCAGTCGGATGGGTTATTGCACTTG
GTCATGAGCTGCGGGCTAAAGGGAGGGATGGAAAGAGAGGCGCTACAGCT
GTTCGAGGCCTGGTGGGATGCTGACTTGACTTTCTCGCCTGACACCAGGT
GTCGCATTCTTGCAACGCGATGTGCGTTAAGACTAGCACACTTGCCTGTC
TCCTCTTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCTTCCTCCTCCGCCGCCGCCGCCGCAGCAGCAG
CAGCAGCAGCAGCAGAAGCAGGAGCAGGAGCAGCAGAAGAAACAGAGGCA
GGTGTAGAGTACTCAACCGCCCCGGCCACGGGCCTCGTGCCGTTAGGAAG
TCTCTTGGACCGTTTCGATAAACGTGCCCCTGGGCAAAAAGTCATAGTCT
GCAATATGGTCATGGAGCACGTGCGTGTCAAAGGCCTGATTAGAGAAGGC
CTCTCTTTCCTAGATGCCATGCGCGCGCTCCACATCCCCCGAAAATCTCT
CACACTCCTCCCCCTCCTCAAGCTCTGTGCATCTTCCGGCCGCGTGCAAG
AAATGGTGACGCTCGTCGAAGAAATGAAAGACAAGGACCACGTGGCACCC
ACGGCTCACATGTACTCTCAAACAATCGAGGCAGCGGCAAGCGCAGGCAT
GGTTGATGAGGCCCTCCGTCTCTTCGCTACCATGAATGCGGAAGGCGTTG
CTGTCAGTGAAGGGAGCTGCATTGATCTTATGGCAGCACTGGCACGTAAT
GGAGACTGGTCTCGCGCATTGGACCTACTTCAAGACGTGCGGGCCTGCAC
CAAACGACCACCTACGTGTATTATCTATACCACGGCGGTCAATGCGTGTG
GGAATGGAGGTGCTTGGGAGATGGCGCTGATGCTCATGAAAAGGATGGAG
GAAGAAGGCATCGCTCCCAATACATACACATATGGCGCAGCAATCAAGGC
GTGTGCAAGAGCGGGGAAGTGGGAGCAGGCTGAAAAGTTATTTGCAGAGA
TGGACGAGAGGGGGGTAGCTCAGAATGAGGTGACTTTCACGGCGATTTTG
GATGCATATGCCAAGGCAGGTCGAGCGCGCGATGCTGCTACGTGCTTGGA
GGCGATGAAGACGAAGGGGTTACGACCTTCTACCCCTCATTATACTGCTG
TTATTGACGCATGCAGTCGTACGGGGGAGTACAGGCAGGCGTTGCTATGG
TTGGAAGAGATGAAAAGGGAAGAAGTGCCAATCAACACCCTCACCTACTC
GGCTTCGCTCTCCGCGTGTGGCAAAGGCGGGGCCTGGGATGAAGCGGTGC
GGGTGCTATTAAACATCCTTTCCGCAGGCGAGAGGCCATCTTCTGTAATT
TATATGCTGACAATCGATGCCTGCCGCCGTGCGAACCAATGGCCCGTCGC
TGCTTACCTGTGGGATATGCTGGAGTATACTGACTCTACCTCGCTGAACC
AACCCACCCTCAACTCTCTCATTTGCTCCATGGAGCATCCCGCCCTTCTC
CCGACCATGGCGTGGTATTACAAACGTGCTTATGAGAGAGGGAGGGTTAA
TCATTGGTCAATTCAATTCTTTCGGGTGATGGACTTGCACAACTTTTCCC
GGCCTCTGTCAAAGGCGGCGTTGTATCATGTTTTGACTAGCATGCTCAGG
AAATATGGACCAGAGATCACCAAAGATGCCAATAGAAGAAGCGAGGAGTT
GACCACAGCAGCAACAGCAGCAACAGCAACAGCAGCAAGACCTTTCACCG
AGAAGATGGCAAGGGGTACATTCAAGACAACCGAAACCACCACAAATGAA
AACACCAGCAGCAAAAGCAGCAGAACCACGAACACCATCCTCACCAACAA
TAACAACAAAAAATGGTCTCCCAGCGAGATGTATCTACCCTGGCCCCGAA
ACCAATCTCGGCACGGGTACATCCAAGACCCGCGCGACCCCCTCATCATC
GTCACCGGCCACGGTCGCCGCCGAGCAGCAGGCACTTCCATCCTCCGCGA
CGACGTGTCAGAGTTTCTAAAATCGGAGTTTCGCCCGTCTTTACCCACAG
AAACGGTGCCGTATAACCCAGGGCGGCTGTTGGTGCCTAGCCAGAGTTTG
TTGGCATATGTGCGGGCCATGGTGCTTAGTGATGCAGAGGGGAGGGGAGG
GGAGGATTGGAAGTAGGAAGCAGATGTAGGTGGGAGGGTTGGCTAGGAAC
GTTTCTTGGCAAGGTGATATACTCAGTATATATGTGTGCGAACATAGGGA
AGGATGTAACAGAATCCTGCCCATGCCGAGGTAAGGGGGAGAGAGGGAGG
GGAAGGGGGCACAGAGAGATGGTCAAGTGATGTGAGCATCACATTTGAAC
ACTGGACGTAAAACAATGCGACTTATCTATTGCGCTCCCAAAGCAACAAA
TAGAGTGCCAAAGCAACAAACAGAATGTTAATCCCACGGACGCAAAAACA
TGTTTCTCAA
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protein sequence of NO17G01110.1

>NO17G01110.1-protein ID=NO17G01110.1-protein|Name=NO17G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1272bp
MMTTWTFNRQSEEDSSEADGGLLLSVTSTDCTHYDPTHNNKHYRYIVRGL
IALCDRASDSHSSVTEPGFCFDEYVAHQYLNYHPLHHTQAMRQRCAVLPL
CAGRRRAISSSSSSSSSSSSSSRSAAQRGGYQRSAAASTARPIQPPRPRA
DIPEAVQADWRQPIGSSSSSFGRGSQRTRPTGILPSIISPPLPAPTAGEL
GHQQVLPENAPARASIVAAMARGEPATVVELVQQLGVEGVYRLDLPLACR
LVDACVHTRAWHLVIEGLCPCPAFPMDHRVCLHILQACSRMKSWQPVLAL
LRKSMPLRGVPLTAEVYRAALVACGRCHEAGEVRKLLEEMQARRFLNIRN
MRDMHALVLEAAGADGWDAALMVCQQYFGIAASGKARGVGYNKRIAAVVA
AAAEPVSQETSVLEGEMLEATIEVCRRTLREAHRKNERAMLVRMHDRLWG
VVREARRTRGVELSKGAWASLIQVGSKAGKTYDVSSMMEAMVAEDVEGES
RLGERARWRKVALQRCWVSNDWVGARRVLEEMWKKREREASPQSDGLLHL
VMSCGLKGGMEREALQLFEAWWDADLTFSPDTRCRILATRCALRLAHLPV
SSSSFSSSSSSSSSSSSSSSSSSSSSAAAAAAAAAAAAEAGAGAAEETEA
GVEYSTAPATGLVPLGSLLDRFDKRAPGQKVIVCNMVMEHVRVKGLIREG
LSFLDAMRALHIPRKSLTLLPLLKLCASSGRVQEMVTLVEEMKDKDHVAP
TAHMYSQTIEAAASAGMVDEALRLFATMNAEGVAVSEGSCIDLMAALARN
GDWSRALDLLQDVRACTKRPPTCIIYTTAVNACGNGGAWEMALMLMKRME
EEGIAPNTYTYGAAIKACARAGKWEQAEKLFAEMDERGVAQNEVTFTAIL
DAYAKAGRARDAATCLEAMKTKGLRPSTPHYTAVIDACSRTGEYRQALLW
LEEMKREEVPINTLTYSASLSACGKGGAWDEAVRVLLNILSAGERPSSVI
YMLTIDACRRANQWPVAAYLWDMLEYTDSTSLNQPTLNSLICSMEHPALL
PTMAWYYKRAYERGRVNHWSIQFFRVMDLHNFSRPLSKAALYHVLTSMLR
KYGPEITKDANRRSEELTTAATAATATAARPFTEKMARGTFKTTETTTNE
NTSSKSSRTTNTILTNNNNKKWSPSEMYLPWPRNQSRHGYIQDPRDPLII
VTGHGRRRAAGTSILRDDVSEFLKSEFRPSLPTETVPYNPGRLLVPSQSL
LAYVRAMVLSDAEGRGGEDWK*
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Synonyms
Publications