NO17G01020, NO17G01020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01020 vs. NCBI_GenBank
Match: EWM21117.1 (hypothetical protein Naga_100041g10 [Nannochloropsis gaditana]) HSP 1 Score: 283.5 bits (724), Expect = 2.200e-72 Identity = 244/845 (28.88%), Postives = 307/845 (36.33%), Query Frame = 0 Query: 7 GGEPAAPYTVGAAGAANQPHQPPPGHATRIPDIDLATTRVAGVRGVVRAKRGLRQCVQSGHRGXXXXXXXXXXXAVDDGPLAALATTVVSCTLHGIDGAGLPNSRIQVFFYDKWADEIEGCLENGYSLTLTGPGCMVRAVPAGDHPCALLVAPPALLSDVASLGAPST---RVRVDLKHPEGAELNMDLDLDQNTMDARVEAFKSTCARRGGGRGGKEEGRVQGSXXXXXXXXGRGTIGGGVLMPTRKYEYSKCGEIRLERDSGKEINIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRWREMTCLPSWGWIKQDFNLGPKSCHQIWRRLRGEEWQPALLPSFLPPGGETEQPSVSTMIDQPGDFVAMLINKNIHEGAFCLWDGTGCTAATAAVGVGVSDAVGWSVRRAALKAIAGPKWGELREMVTRDLVTDSSIGGRXXXXXXXXXXXXXIEGGKAEFLPPVMYSEDLPSAVGFQEGVRRHGCWIVVRVAEEHKWRLAQLNLPVGGWVRMKGLTIAPFGMGKGGGRGEGEELWAGLNASVNPMPEEGLEVHRVAVRLLYRLREEQHRASVAVREGKTAPCMELFVLPPPARRREHRSGFPRSFIVEALGSSPMTFFAVRARIIGWWPQDLRKFCTHVEGQWIYIFTLRLQDTSGEMDVVVNNEVGEWFFSKREGTVRAWNMEEEGKEGRAKLKAMGEILEEYKRQVSFDFVVKSYLV-GSAGEEGGRGGGRGMKRFRLLQP 848 GG A G A N P G AT I I+LATT + V+G V A +GLR C++ G +D+GPLA++ATTVVSCTLHG DG G P++RI+VFFYDKWA+EI CLEN L+LTGPG MVRAVP GDH CAL+VAPP L LGA T R+++ L H +G EL +DL+LDQNT+DAR EA+K C R G G +G VQ N+ VG W+R++GLTI P G G+GG GE E+LWAG+NAS+ MP + EVHRVAVR L RLR Q R + +TA CM LF PPP R R+H S P +++VEALGSS T FA+R +I+GWWPQDL++FC +G+W ++FTLRL+D +G +D VV +V EWFF R +R ++ EG E RA L+A+GE +EE+KRQ FDFVVKSYL G G E G+ GR +KRFRLL+P Sbjct: 12 GGHDADGKRDGMLRAKNTPQ----GVATCIASINLATTELLNVQGKVHAMQGLRACIRD-EEGVSGGTAGLLGGPLDNGPLASMATTVVSCTLHGADGNGRPSNRIRVFFYDKWAEEIGDCLENNCLLSLTGPGEMVRAVPTGDHGCALVVAPPVL------LGASHTNTPRIKLVLTHEKGPELTLDLELDQNTLDARAEAYKLACGGRRGSAG--VQGHVQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVGVGAWLRVRGLTIGPAGRGEGGD-GE-EKLWAGMNASLISMPAKSFEVHRVAVRFLQRLRMHQRRLAAQALLNQTAKCMRLFESPPP-RTRKHGSQHPLAYVVEALGSSTPTIFALRVKIVGWWPQDLQRFCVEDDGKWRFLFTLRLEDVTGALDAVVFGDVAEWFFVDR--GLRPTDLAGEGAETRASLQAIGEAMEEFKRQGYFDFVVKSYLTRGDRGRE-GKMRGRMVKRFRLLKP 456
BLAST of NO17G01020 vs. NCBI_GenBank
Match: CBJ28873.1 (POT1 protection of telomeres 1 homolog [Ectocarpus siliculosus]) HSP 1 Score: 86.7 bits (213), Expect = 3.900e-13 Identity = 91/370 (24.59%), Postives = 142/370 (38.38%), Query Frame = 0 Query: 93 TVVSCTLHGIDGA-GLPNSRIQVFFYDKWADEIEGCLENGYSLTLTGPGC-MVRAVPA----GDHPCALLVAPPALLSDVASLGAPSTRVRVDLKHPEGAELNMDLDLDQNTMDARVEAFKSTCARRGGGRGGKEEGRVQGSXXXXXXXXGRGTIGGGVLMPT----------RKYEYSKCGEIRLERDSGKEINIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVGPGQVHRSQYVVARRK-----------------------------------------PGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRW 406 T+ +L G GA G + RI +FYDKWAD+ + G + ++GP +V P+ GDHP LV + +LGA V H G A GGR + + V G G+ GG PT Y Y+ IR++ + + N++ +V SF + G D + S L+DE+ +D + CN F P VG+++R HR KV+EY+GRPQL+ G + ++V R+K P AG ++ V WE++ +S N+T + D+ +++ W Sbjct: 85 TLRDLSLPGNSGANGNLHHRIDAYFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASDNGDHPFC-LVFHTGRDDSLLALGA------VAADHLAGV------------------------AGGSGGRSDEADDVVSCKVVRKAAQPGAGSRGGAA--PTXXXXXXXXXXXXYAYTTLDSIRVQEE---KTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDDAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAG---GAAWLVIRKKKAMRETYQKCPIGGISPASXXXXXXXXXXXXXXXXXXXXXGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDW 415
BLAST of NO17G01020 vs. NCBI_GenBank
Match: XP_019613594.1 (PREDICTED: protection of telomeres protein 1-like [Branchiostoma belcheri]) HSP 1 Score: 73.2 bits (178), Expect = 4.500e-9 Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 0 Query: 250 RKYEYSKCGEIRLERDSGKEINIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQ-LVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRWREMT 410 R Y Y+K ++++ +N++A V F P + GTD+ LVD + + D GL C F + P++ +VG+++R HR+KV ++ PQ GPG +V +PGA + S+NFTF D+ +L + W +T Sbjct: 31 RTYGYTKLCDVKVR----TTVNVYAAVKFFKPPFRSRGTDYCMVVRLVDPSLDNLDDGLKCLFFAKEQSILPQIHSVGDIIRIHRLKVDNFRDEPQGNKGPG----FSCLVFDGRPGA------------TVDPRSDSQNFTFGPEDEEKVLELRDWVALT 171
BLAST of NO17G01020 vs. NCBI_GenBank
Match: GAY04285.1 (Hypothetical protein PINS_012112 [Pythium insidiosum]) HSP 1 Score: 73.2 bits (178), Expect = 4.500e-9 Identity = 46/169 (27.22%), Postives = 83/169 (49.11%), Query Frame = 0 Query: 243 GGVLMPTRKYEYSKCGEIRLERDSGKEINIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRW-REMTC 411 GG Y Y+K GE+ N++ +V + P+ ++G+D+ S ++DETT + +F P+ D PK+ VG+++R H++K+ YQ R Q G ++Y+V RR+ ++G E + + ++TFD SD+ + W R++ C Sbjct: 216 GGHATRGSPYIYTKLGEL-----IPGNANLYGVVVNMSLPKRSDGSDYYMSVQIIDETTPRREDATQVMVFYPSLDRMPKILYVGDVVRFHKIKINRYQDRIQ--GICSSRATRYLVLRRR------------DDGTIEQQTDNSSWTFDVSDEERFRQLSEWSRQILC 365
BLAST of NO17G01020 vs. NCBI_GenBank
Match: XP_002605617.1 (hypothetical protein BRAFLDRAFT_232831 [Branchiostoma floridae] >EEN61627.1 hypothetical protein BRAFLDRAFT_232831, partial [Branchiostoma floridae]) HSP 1 Score: 72.4 bits (176), Expect = 7.600e-9 Identity = 45/159 (28.30%), Postives = 76/159 (47.80%), Query Frame = 0 Query: 252 YEYSKCGEIRLERDSGKEINIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQ-LVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRWREMT 410 Y Y+K ++++ +N++A V F P + GTD+ LVD + D D GL C F + P++ ++G+++R HR+KV Y+G PQ GPG +V + GA + S+NFTF+ D+ + + +W +T Sbjct: 1 YSYTKLCDVKVR----TTVNLYAAVKFFKPPFPSRGTDYCMVAKLVDPSLDDLDEGLKCLFFAKEESLLPQIYSIGDIVRIHRLKVDNYRGAPQGNKGPG----FSCLVFDGRQGA------------PTQPRSDSQNFTFEPEDEEKVYRLRQWVTLT 139
BLAST of NO17G01020 vs. NCBI_GenBank
Match: GAX97229.1 (Hypothetical protein PINS_005129 [Pythium insidiosum]) HSP 1 Score: 72.4 bits (176), Expect = 7.600e-9 Identity = 46/169 (27.22%), Postives = 82/169 (48.52%), Query Frame = 0 Query: 243 GGVLMPTRKYEYSKCGEIRLERDSGKEINIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRW-REMTC 411 GG Y Y+K GE+ N++ +V + P+ ++G+D+ S ++DETT + +F P+ D PK+ VG+++R H++K+ YQ R Q G ++Y+V RR+ ++G E + ++TFD SD+ + W R++ C Sbjct: 126 GGHATRGSPYIYTKLGEL-----IPGNANLYGVVVNMSLPKRSDGSDYYMSVQIIDETTPRREDATQVMVFYPSLDRMPKILYVGDVVRFHKIKINRYQDRIQ--GICSSRATRYLVLRRR------------DDGTIEQQTDXSSWTFDVSDEERFRQLSEWSRQILC 275
BLAST of NO17G01020 vs. NCBI_GenBank
Match: PSC73539.1 (protection of telomeres 1 [Micractinium conductrix]) HSP 1 Score: 70.5 bits (171), Expect = 2.900e-8 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 0 Query: 267 GKEINIWAMVGSFGQPRATNGTDFSQSFLLVDETTTD--ADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVG 349 G +NIWA+V PRAT GTD + LVD +T D G+ F +AD P V G+++R HRVK+ +Q +PQL+G Sbjct: 180 GAAVNIWAVVAESSVPRATRGTDMVVNLTLVDPSTDDLALPAGIELLCFAASADELPTVHRPGDIIRLHRVKINRFQEKPQLLG 263
BLAST of NO17G01020 vs. NCBI_GenBank
Match: ETI44106.1 (hypothetical protein F443_11158 [Phytophthora parasitica P1569]) HSP 1 Score: 70.1 bits (170), Expect = 3.800e-8 Identity = 43/156 (27.56%), Postives = 76/156 (48.72%), Query Frame = 0 Query: 271 NIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRWREMTCLPSWGWIKQDFNLGPK 427 +I+ +V + P+ T+G DF + + DE+ + NIF P + PK++ VG+++R H+VK+++YQ R Q G ++++V R K G E S+ +TF+ SD+L + +W + L + Q +L PK Sbjct: 225 DIYGVVVNMTLPKKTSGRDFCMTVSVTDESCPTRAAAIQVNIFYPTIEKIPKIKFVGDIIRFHKVKIQQYQDRIQ--GLSLSRATRHLVLREK------------ANGSLEQVTNSDTWTFESSDELRTRKLLKWARKS-LAEDDTLPQGCSLAPK 365
BLAST of NO17G01020 vs. NCBI_GenBank
Match: ETI44107.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569]) HSP 1 Score: 70.1 bits (170), Expect = 3.800e-8 Identity = 43/156 (27.56%), Postives = 76/156 (48.72%), Query Frame = 0 Query: 271 NIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRWREMTCLPSWGWIKQDFNLGPK 427 +I+ +V + P+ T+G DF + + DE+ + NIF P + PK++ VG+++R H+VK+++YQ R Q G ++++V R K G E S+ +TF+ SD+L + +W + L + Q +L PK Sbjct: 225 DIYGVVVNMTLPKKTSGRDFCMTVSVTDESCPTRAAAIQVNIFYPTIEKIPKIKFVGDIIRFHKVKIQQYQDRIQ--GLSLSRATRHLVLREK------------ANGSLEQVTNSDTWTFESSDELRTRKLLKWARKS-LAEDDTLPQGCSLAPK 365
BLAST of NO17G01020 vs. NCBI_GenBank
Match: ETI44108.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETI44109.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569]) HSP 1 Score: 70.1 bits (170), Expect = 3.800e-8 Identity = 43/156 (27.56%), Postives = 76/156 (48.72%), Query Frame = 0 Query: 271 NIWAMVGSFGQPRATNGTDFSQSFLLVDETTTDADTGLVCNIFRPAADVFPKVRAVGELLRCHRVKVKEYQGRPQLVGPGQVHRSQYVVARRKPGAGPVGSEEVWEEGKWELEGTSENFTFDESDKLAILSIWRWREMTCLPSWGWIKQDFNLGPK 427 +I+ +V + P+ T+G DF + + DE+ + NIF P + PK++ VG+++R H+VK+++YQ R Q G ++++V R K G E S+ +TF+ SD+L + +W + L + Q +L PK Sbjct: 143 DIYGVVVNMTLPKKTSGRDFCMTVSVTDESCPTRAAAIQVNIFYPTIEKIPKIKFVGDIIRFHKVKIQQYQDRIQ--GLSLSRATRHLVLREK------------ANGSLEQVTNSDTWTFESSDELRTRKLLKWARKS-LAEDDTLPQGCSLAPK 283 The following BLAST results are available for this feature:
BLAST of NO17G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01020 ID=NO17G01020|Name=NO17G01020|organism=Nannochloropsis oceanica|type=gene|length=3076bpback to top protein sequence of NO17G01020.1 >NO17G01020.1-protein ID=NO17G01020.1-protein|Name=NO17G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=853bpback to top Synonyms
Publications
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