NO17G01010, NO17G01010 (gene) Nannochloropsis oceanica

Overview
NameNO17G01010
Unique NameNO17G01010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1400
Alignment locationchr17:322878..324277 -

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Properties
Property NameValue
DescriptionProtein urg3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:322878..324277 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012469DUF1688
Homology
BLAST of NO17G01010 vs. NCBI_GenBank
Match: EWM21139.1 (Protein of unknown function DUF1688 [Nannochloropsis gaditana])

HSP 1 Score: 537.7 bits (1384), Expect = 3.200e-149
Identity = 292/453 (64.46%), Postives = 334/453 (73.73%), Query Frame = 0
Query:   21 AVGSPCLQQALKKARLVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNAVPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEE--GSKMQADA---------------------------------------ALEEHPEFFSSVLAE---EKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG---LGRQDGRLRR 427
            +VGSPC  QA KKARL+L+DPV KLRALPTIRERC  IYAA ++ EL+HFALHE+K+GEVVDYV  VI+ERFP GM+ VPNHSRYRHFE GN+DRLSQLR+A   + VD RE+ARRLVDLVVVSVLLDAGAGDKWKY+E+ T  TI RSEGLGVASF MFM GAFSS +E+  G ++QADA                                       ALEEHPEFFSS LA    +++GG   FRPGYLVDYLFAQA PG++PA V VHDLW+ VM GLESIWPAGRT V G+ MGDVWPHSAL    ++   GDG  GEE  ++A   LVPFHKLSQWLTYSL+EPL EAG+  T+T H+TGLPEYRNGGLFVDLGVL  KR  +LD +GH P SEVIVEWRALTVVLLDEVAR LR K+G +E+ LPLVKVLEGG    GR+  R +R
Sbjct:   14 SVGSPCTHQASKKARLLLQDPVDKLRALPTIRERCQQIYAAGQRGELKHFALHEDKIGEVVDYVQSVIEERFPGGMDMVPNHSRYRHFEPGNVDRLSQLRSAC--KDVDKREVARRLVDLVVVSVLLDAGAGDKWKYVEKETGLTIDRSEGLGVASFRMFMDGAFSSDAEQAKGKRLQADAVGLQALTSQRVREGFQVKEDSNPLVGTEGRAALLRRLGKALEEHPEFFSSRLASKGADEDGGAEIFRPGYLVDYLFAQANPGTDPASVPVHDLWRVVMDGLESIWPAGRTSVGGRPMGDVWPHSALALGGKVAEEGDGGLGEE--KEAGACLVPFHKLSQWLTYSLMEPLAEAGLALTETRHMTGLPEYRNGGLFVDLGVLEAKRPELLDPAGHAPGSEVIVEWRALTVVLLDEVARRLREKLGASEKSLPLVKVLEGGTWTAGRKIAREKR 462          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: CBJ30789.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 345.5 bits (885), Expect = 2.300e-91
Identity = 207/414 (50.00%), Postives = 250/414 (60.39%), Query Frame = 0
Query:   42 VVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNAVPNHSRYRHFEAGNLDRLSQLRAA-SGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSS--------ASEEGSKMQAD------------------------------AALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            V  LR+L  IRERC VI+ AAK D+L HF L   K+ +V  +V   + +R     + VP HSR+RHFEAG LDR ++L AA  G +  D  E ARRLVDLVV SVLLDAGAGD WKY E+ T     RSEGLGVASFHMF AGAFSS        A   G K  AD                               ALE+HP FF +       GG+  FRPG +VDYL AQA   S+   +T   +W+ VMYG E++WPAGRT ++G++MGDVW HSAL      DG G               LVPFHKLSQW+TYSL+EPL  AG++ T+T  +TGLPEYRNGGL +D+G+L  K   +     H P+ EVIVEWRALTV LLDEVA  LR K+G+TE+  PLVK+LEGG
Sbjct:   16 VATLRSLACIRERCGVIFDAAKSDKLAHFRLDLSKMDDVATFVQ-GLMDRDYSSYDDVPYHSRWRHFEAGGLDRTARLTAAWDGSKSCDELEKARRLVDLVVTSVLLDAGAGDVWKYTEKSTGFEAGRSEGLGVASFHMFGAGAFSSDTGSNPHRADSLGLKGLADDSVRRAFQVDDGVNPLVGCDGRTQVLKRLGTALEQHPVFFEA-------GGI--FRPGNMVDYLLAQASDDSKTVSIT--KVWEVVMYGFEAMWPAGRTELDGRSMGDVWEHSAL----PDDGSG------------WSNLVPFHKLSQWMTYSLMEPLQAAGLVLTETELMTGLPEYRNGGLLLDMGLLEAKHPGV-TGQAHGPEEEVIVEWRALTVCLLDEVAAALRQKLGKTEKEFPLVKMLEGG 400          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: ETL95288.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 329.3 bits (843), Expect = 1.700e-86
Identity = 198/430 (46.05%), Postives = 251/430 (58.37%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA--------------------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DYV  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                                      +E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYVINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTEENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 414          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: ETM48492.1 (hypothetical protein, variant [Phytophthora parasitica] >ETO77595.1 hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 328.9 bits (842), Expect = 2.300e-86
Identity = 197/430 (45.81%), Postives = 251/430 (58.37%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA--------------------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                                      +E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTEENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 414          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: ETP18622.1 (hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 328.9 bits (842), Expect = 2.300e-86
Identity = 197/430 (45.81%), Postives = 251/430 (58.37%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA--------------------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                                      +E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTKENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 414          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: ETK88738.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 327.0 bits (837), Expect = 8.600e-86
Identity = 197/430 (45.81%), Postives = 250/430 (58.14%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA--------------------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DYV  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                                      +  +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYVINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPESDPHRVDAAALANLADEAISKAFQVTEENPLVGCAGRTDLLKGLGKSIANYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 414          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: ETI48858.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETP46531.1 hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 326.6 bits (836), Expect = 1.100e-85
Identity = 196/430 (45.58%), Postives = 250/430 (58.14%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA--------------------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                                      +  +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTEENPLVGCAGRTDLLKGLGKSIANYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 414          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: ETL42126.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 326.6 bits (836), Expect = 1.100e-85
Identity = 196/430 (45.58%), Postives = 250/430 (58.14%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA--------------------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                                      +  +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTKENPLVGCAGRTDLLKGLGKSIANYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 414          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: ETL95287.1 (hypothetical protein L917_06886 [Phytophthora parasitica])

HSP 1 Score: 326.2 bits (835), Expect = 1.500e-85
Identity = 192/416 (46.15%), Postives = 244/416 (58.65%), Query Frame = 0
Query:   40 DPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA--------------------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DYV  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                                      +E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:   50 DQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYVINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTEENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 432          
BLAST of NO17G01010 vs. NCBI_GenBank
Match: KUF91687.1 (Rho GTPase-activating protein gacA [Phytophthora nicotianae])

HSP 1 Score: 326.2 bits (835), Expect = 1.500e-85
Identity = 189/405 (46.67%), Postives = 242/405 (59.75%), Query Frame = 0
Query:   40 DPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA---------------------------LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGG 417
            D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  V ++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DAA                           +  +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG
Sbjct:    7 DQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVFRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVVGDGYIGLGKSIANYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGG 378          
The following BLAST results are available for this feature:
BLAST of NO17G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21139.13.200e-14964.46Protein of unknown function DUF1688 [Nannochlorops... [more]
CBJ30789.12.300e-9150.00conserved unknown protein [Ectocarpus siliculosus][more]
ETL95288.11.700e-8646.05hypothetical protein, variant [Phytophthora parasi... [more]
ETM48492.12.300e-8645.81hypothetical protein, variant [Phytophthora parasi... [more]
ETP18622.12.300e-8645.81hypothetical protein, variant [Phytophthora parasi... [more]
ETK88738.18.600e-8645.81hypothetical protein, variant [Phytophthora parasi... [more]
ETI48858.11.100e-8545.58hypothetical protein, variant [Phytophthora parasi... [more]
ETL42126.11.100e-8545.58hypothetical protein, variant [Phytophthora parasi... [more]
ETL95287.11.500e-8546.15hypothetical protein L917_06886 [Phytophthora para... [more]
KUF91687.11.500e-8546.67Rho GTPase-activating protein gacA [Phytophthora n... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR036ncniR036Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR085ngnoR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01010.1NO17G01010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626128gene_7791Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g9gene9290Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01010.1NO17G01010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01010 ID=NO17G01010|Name=NO17G01010|organism=Nannochloropsis oceanica|type=gene|length=1400bp
ATGTCGTCGGTCCCGCCGTCACCGCCGCCGGCCGCGTCCTCGTCCACTCC
CACGGCCCCCGCGGTCGGCTCCCCCTGCTTGCAGCAAGCCCTTAAAAAGG
CTCGTCTGGTGCTCAGAGACCCCGTGGTCAAGCTGCGAGCGTTGCCCACA
ATCCGGGAACGCTGTCACGTCATTTATGCTGCGGCAAAACAGGACGAGCT
TGAGCACTTTGCCTTGCACGAGGAGAAACTGGGGGAGGTGGTGGATTATG
TGCATGTTGTGATTCAAGAACGCTTCCCAGAGGGGATGAATGCGGTGCCC
AACCACTCTCGGTACCGCCACTTTGAAGCGGGGAATTTGGACCGACTGAG
TCAGCTCCGTGCGGCATCTGGAGAGCAGGGAGTGGATGCGCGGGAGATAG
CTCGGCGATTGGTGGACTTGGTGGTGGTGAGTGTTCTGCTTGATGCTGGG
GCAGGGGATAAATGGAAGTATATGGAGGAGGGGACCAGGCAGACAATCAC
GCGCTCAGAAGGGTTGGGGGTTGCGAGTTTTCACATGTTTATGGCGGGGG
CGTTCTCATCGGCGAGCGAGGAGGGGAGTAAGATGCAGGCGGATGCGgta
ggtctgcagggattaacgaccgaggcaatcaaaagggggtttcaagtcga
tggagaagcaaacccttggttggggctgatggaagggcagacttgcttcg
gcgcttgggcaagGCGTTGGAAGAACACCCTGAATTTTTTTCCTCGGTCT
TGGCGGAAGAGAAGGAAGGAGGGGTGGCCTCTTTCCGTCCCGGCTACCTG
GTGGATTACTTGTTTGCACAGGCCAAGCCCGGGAGTGAGCCGGCGGAAGT
GACAGTGCATGATCTATGGCAGGCGGTGATGTATGGGTTGGAGTCTATTT
GGCCTGCGGGAAGGACCGTGGTGGAGGGGAAGAATATGGGGGATGTGTGG
CCTCACAGTGCCCTGTTGAAGCACACGGAGATGGATGGAAGGGGGGACGG
GGAGGACGGGGAGGAAGAGGGGGAAGATGCAACCAGAGGCTTAGTCCCGT
TCCACAAGTTGTCGCAGTGGCTGACGTATTCGTTGTTGGAGCCTCTGGGG
GAGGCAGGAATGTTGTTCACGGATACCACGCACTTGACGGGGTTACCCGA
GTATAGAAATGGAGGCTTGTTTGTTGATTTGGGAGTGTTGGTACCGAAGA
GAGCGTCCATTCTAGATTCTTCAGGACATCTGCCCGATTCGGAGGTGATT
GTTGAATGGAGAGCATTGACGGTGGTGTTATTGGACGAGGTGGCGAGGCT
ATTGAGGATCAAGGTAGGGGAGACTGAGGAGGGCTTGCCGCTGGTGAAGG
TCTTGGAAGGGGGACTTGGACGGCAGGACGGAAGATTGCGAAGGCGTTGA
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protein sequence of NO17G01010.1

>NO17G01010.1-protein ID=NO17G01010.1-protein|Name=NO17G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MSSVPPSPPPAASSSTPTAPAVGSPCLQQALKKARLVLRDPVVKLRALPT
IRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNAVP
NHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAG
AGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAA
LEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDL
WQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEE
EGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGG
LFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKV
GETEEGLPLVKVLEGGLGRQDGRLRRR*
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Synonyms
Publications