NO17G00930, NO17G00930 (gene) Nannochloropsis oceanica

Overview
NameNO17G00930
Unique NameNO17G00930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1458
Alignment locationchr17:303407..304864 -

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Properties
Property NameValue
DescriptionUracil catabolism protein 4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:303407..304864 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012469DUF1688
Homology
BLAST of NO17G00930 vs. NCBI_GenBank
Match: EWM21139.1 (Protein of unknown function DUF1688 [Nannochloropsis gaditana])

HSP 1 Score: 656.8 bits (1693), Expect = 5.400e-185
Identity = 336/470 (71.49%), Postives = 386/470 (82.13%), Query Frame = 0
Query:   21 AVGSPCLQQALKKARLVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNAVPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEE--GSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAE---EKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            +VGSPC  QA KKARL+L+DPV KLRALPTIRERC  IYAA ++ EL+HFALHE+K+GEVVDYV  VI+ERFP GM+ VPNHSRYRHFE GN+DRLSQLR+A   + VD RE+ARRLVDLVVVSVLLDAGAGDKWKY+E+ T  TI RSEGLGVASF MFM GAFSS +E+  G ++QADAVGLQ LT++ ++ GFQV  ++NPLVG +GRA LLRRLGKALEEHPEFFSS LA    +++GG   FRPGYLVDYLFAQA PG++PA V VHDLW+ VM GLESIWPAGRT V G+ MGDVWPHSAL    ++   GDG  GEE  ++A   LVPFHKLSQWLTYSL+EPL EAG+  T+T H+TGLPEYRNGGLFVDLGVL  KR  +LD +GH P SEVIVEWRALTVVLLDEVAR LR K+G +E+ LPLVKVLEGGTWTAGRKIA+  RP++ GPPI IVSDGTVF
Sbjct:   14 SVGSPCTHQASKKARLLLQDPVDKLRALPTIRERCQQIYAAGQRGELKHFALHEDKIGEVVDYVQSVIEERFPGGMDMVPNHSRYRHFEPGNVDRLSQLRSAC--KDVDKREVARRLVDLVVVSVLLDAGAGDKWKYVEKETGLTIDRSEGLGVASFRMFMDGAFSSDAEQAKGKRLQADAVGLQALTSQRVREGFQVKEDSNPLVGTEGRAALLRRLGKALEEHPEFFSSRLASKGADEDGGAEIFRPGYLVDYLFAQANPGTDPASVPVHDLWRVVMDGLESIWPAGRTSVGGRPMGDVWPHSALALGGKVAEEGDGGLGEE--KEAGACLVPFHKLSQWLTYSLMEPLAEAGLALTETRHMTGLPEYRNGGLFVDLGVLEAKRPELLDPAGHAPGSEVIVEWRALTVVLLDEVARRLREKLGASEKSLPLVKVLEGGTWTAGRKIAREKRPDSCGPPIVIVSDGTVF 479          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: CBJ30789.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 455.7 bits (1171), Expect = 1.800e-124
Identity = 250/446 (56.05%), Postives = 306/446 (68.61%), Query Frame = 0
Query:   42 VVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNAVPNHSRYRHFEAGNLDRLSQLRAA-SGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSK-MQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            V  LR+L  IRERC VI+ AAK D+L HF L   K+ +V  +V   + +R     + VP HSR+RHFEAG LDR ++L AA  G +  D  E ARRLVDLVV SVLLDAGAGD WKY E+ T     RSEGLGVASFHMF AGAFS  S+ GS   +AD++GL+GL  ++++R FQVD   NPLVG DGR  +L+RLG ALE+HP FF +       GG+  FRPG +VDYL AQA   S+   +T   +W+ VMYG E++WPAGRT ++G++MGDVW HSAL      DG G               LVPFHKLSQW+TYSL+EPL  AG++ T+T  +TGLPEYRNGGL +D+G+L  K   +     H P+ EVIVEWRALTV LLDEVA  LR K+G+TE+  PLVK+LEGGTW AGR +AK LRP+T GPPI IVSDGTVF
Sbjct:   16 VATLRSLACIRERCGVIFDAAKSDKLAHFRLDLSKMDDVATFVQ-GLMDRDYSSYDDVPYHSRWRHFEAGGLDRTARLTAAWDGSKSCDELEKARRLVDLVVTSVLLDAGAGDVWKYTEKSTGFEAGRSEGLGVASFHMFGAGAFS--SDTGSNPHRADSLGLKGLADDSVRRAFQVDDGVNPLVGCDGRTQVLKRLGTALEQHPVFFEA-------GGI--FRPGNMVDYLLAQASDDSKTVSIT--KVWEVVMYGFEAMWPAGRTELDGRSMGDVWEHSAL----PDDGSG------------WSNLVPFHKLSQWMTYSLMEPLQAAGLVLTETELMTGLPEYRNGGLLLDMGLLEAKHPGV-TGQAHGPEEEVIVEWRALTVCLLDEVAAALRQKLGKTEKEFPLVKMLEGGTWKAGRYMAKTLRPQTCGPPIEIVSDGTVF 430          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETL95288.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 419.9 bits (1078), Expect = 1.100e-113
Identity = 239/461 (51.84%), Postives = 297/461 (64.43%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DYV  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYVINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVT-EENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 443          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETM48492.1 (hypothetical protein, variant [Phytophthora parasitica] >ETO77595.1 hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 419.5 bits (1077), Expect = 1.400e-113
Identity = 238/461 (51.63%), Postives = 297/461 (64.43%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVT-EENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 443          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETP18622.1 (hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 418.7 bits (1075), Expect = 2.500e-113
Identity = 238/461 (51.63%), Postives = 297/461 (64.43%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTKE-NPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 443          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETK88738.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 417.5 bits (1072), Expect = 5.500e-113
Identity = 238/461 (51.63%), Postives = 296/461 (64.21%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DYV  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++  +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYVINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPESDPHRVDAAALANLADEAISKAFQVT-EENPLVGCAGRTDLLKGLGKSIANYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 443          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETI48858.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETP46531.1 hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 417.2 bits (1071), Expect = 7.200e-113
Identity = 237/461 (51.41%), Postives = 296/461 (64.21%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++  +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVT-EENPLVGCAGRTDLLKGLGKSIANYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 443          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETL95287.1 (hypothetical protein L917_06886 [Phytophthora parasitica])

HSP 1 Score: 417.2 bits (1071), Expect = 7.200e-113
Identity = 233/447 (52.13%), Postives = 290/447 (64.88%), Query Frame = 0
Query:   40 DPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DYV  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   50 DQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYVINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVT-EENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 461          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETM48491.1 (hypothetical protein L914_06969 [Phytophthora parasitica] >ETO77594.1 hypothetical protein F444_07232 [Phytophthora parasitica P1976])

HSP 1 Score: 416.8 bits (1070), Expect = 9.400e-113
Identity = 232/447 (51.90%), Postives = 290/447 (64.88%), Query Frame = 0
Query:   40 DPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++E +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   50 DQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVT-EENPLVGCAGRTDLLKGLGKSIENYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 461          
BLAST of NO17G00930 vs. NCBI_GenBank
Match: ETL42126.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 416.4 bits (1069), Expect = 1.200e-112
Identity = 237/461 (51.41%), Postives = 296/461 (64.21%), Query Frame = 0
Query:   27 LQQALKKAR-LVLRDPVVKLRALPTIRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNA-VPNHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAGAGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAVGLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSVLAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESIWPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVPFHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPKRASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVKVLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF 486
            LQ ALK+   L   D V  LR+LP+IR+ CH + A  KQD+L HF++ E K+  + DY+  VI++ +P    A VP HSR+RHFE GN  R+ ++ A       D  E ARRL+DL +VSVLLDAGAG  WKY E GT    +RSEGLG+ASFHMF+AG FSS   E    + DA  L  L  EAI + FQV  E NPLVG  GR DLL+ LGK++  +PEFF        +G   S RPG +VDYL    K  +   EV++ DLW+ V+YGL+ IWPA RT ++G+NMGDVW  S L +H            E+ G+      V FHKLSQWLTYSL+EPL +AG   TD   +TGLPEYRNGGL VD GVLVPK ASIL      P +EVI+EWRALTV +LDE+ +++  ++  T +  PLVK+LEGG+W AGR IAK  R + GGPPI I SDGTVF
Sbjct:   18 LQDALKRTMPLSPADQVAYLRSLPSIRDGCHRVLALGKQDKLPHFSVVESKVPALADYIINVIRQSYPTPNEANVPFHSRWRHFETGNPQRVEKMTAT---WSCDKLEKARRLLDLALVSVLLDAGAGPTWKYKEPGTEDFYSRSEGLGIASFHMFLAGNFSS-DPENDPHRVDAAALANLADEAISKAFQVTKE-NPLVGCAGRTDLLKGLGKSIANYPEFF--------KGADGSIRPGNMVDYL---TKHQNSSGEVSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEH------------EKAGK-----FVSFHKLSQWLTYSLMEPLQDAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFD-PSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKMLEGGSWKAGRVIAKEKRAD-GGPPIKIKSDGTVF 443          
The following BLAST results are available for this feature:
BLAST of NO17G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21139.15.400e-18571.49Protein of unknown function DUF1688 [Nannochlorops... [more]
CBJ30789.11.800e-12456.05conserved unknown protein [Ectocarpus siliculosus][more]
ETL95288.11.100e-11351.84hypothetical protein, variant [Phytophthora parasi... [more]
ETM48492.11.400e-11351.63hypothetical protein, variant [Phytophthora parasi... [more]
ETP18622.12.500e-11351.63hypothetical protein, variant [Phytophthora parasi... [more]
ETK88738.15.500e-11351.63hypothetical protein, variant [Phytophthora parasi... [more]
ETI48858.17.200e-11351.41hypothetical protein, variant [Phytophthora parasi... [more]
ETL95287.17.200e-11352.13hypothetical protein L917_06886 [Phytophthora para... [more]
ETM48491.19.400e-11351.90hypothetical protein L914_06969 [Phytophthora para... [more]
ETL42126.11.200e-11251.41hypothetical protein, variant [Phytophthora parasi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR085ngnoR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004814NSK004814Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00930.1NO17G00930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626128gene_7791Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g9gene9290Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00930.1NO17G00930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00930 ID=NO17G00930|Name=NO17G00930|organism=Nannochloropsis oceanica|type=gene|length=1458bp
ATGTCGTCGGTCCCGCCGTCACCGCCGCCGGCCGCGTCCTCGTCCACTCC
CACGGCCCCCGCGGTCGGCTCCCCCTGCTTGCAGCAAGCCCTTAAAAAGG
CTCGTCTGGTGCTCAGAGACCCCGTGGTCAAGCTGCGAGCGTTGCCCACA
ATCCGGGAACGCTGTCACGTCATTTATGCTGCGGCAAAACAGGACGAGCT
TGAGCACTTTGCCTTGCACGAGGAGAAACTGGGGGAGGTGGTGGATTATG
TGCATGTTGTGATTCAAGAACGCTTCCCAGAGGGGATGAATGCGGTGCCC
AACCACTCTCGGTACCGCCACTTTGAAGCGGGGAATTTGGACCGACTGAG
TCAGCTCCGTGCGGCATCTGGAGAGCAGGGAGTGGATGCGCGGGAGATAG
CTCGGCGATTGGTGGACTTGGTGGTGGTGAGTGTTCTGCTTGATGCTGGG
GCAGGGGATAAATGGAAGTATATGGAGGAGGGGACCAGGCAGACAATCAC
GCGCTCAGAAGGGTTGGGGGTTGCGAGTTTTCACATGTTTATGGCGGGGG
CGTTCTCATCGGCGAGCGAGGAGGGGAGTAAGATGCAGGCGGATGCGGTA
GGTCTGCAGGGATTAACGACCGAGGCAATCAAAAGGGGGTTTCAAGTCGA
TGGAGAAGCAAACCCCTTGGTTGGGGCTGATGGAAGGGCAGACTTGCTTC
GGCGCTTGGGCAAGGCGTTGGAAGAACACCCTGAATTTTTTTCCTCGGTC
TTGGCGGAAGAGAAGGAAGGAGGGGTGGCCTCTTTCCGTCCCGGCTACCT
GGTGGATTACTTGTTTGCACAGGCCAAGCCCGGGAGTGAGCCGGCGGAAG
TGACAGTGCATGATCTATGGCAGGCGGTGATGTATGGGTTGGAGTCTATT
TGGCCTGCGGGAAGGACCGTGGTGGAGGGGAAGAATATGGGGGATGTGTG
GCCTCACAGTGCCCTGTTGAAGCACACGGAGATGGATGGAAGGGGGGACG
GGGAGGACGGGGAGGAAGAGGGGGAAGATGCAACCAGAGGCTTAGTCCCG
TTCCACAAGTTGTCGCAGTGGCTGACGTATTCGTTGTTGGAGCCTCTGGG
GGAGGCAGGAATGTTGTTCACGGATACCACGCACTTGACGGGGTTACCCG
AGTATAGAAATGGAGGCTTGTTTGTTGATTTGGGAGTGTTGGTACCGAAG
AGAGCGTCCATTCTAGATTCTTCAGGACATCTGCCCGATTCGGAGGTGAT
TGTTGAATGGAGAGCATTGACGGTGGTGTTATTGGACGAGGTGGCGAGGC
TATTGAGGATCAAGGTAGGGGAGACTGAGGAGGGCTTGCCGCTGGTGAAG
GTCTTGGAAGGGGGGACTTGGACGGCAGGACGGAAGATTGCGAAGGCGTT
GAGGCCGGAGACAGGGGGGCCACCGATCACGATCGTCAGTGATGGAACGG
TATTCTAA
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protein sequence of NO17G00930.1

>NO17G00930.1-protein ID=NO17G00930.1-protein|Name=NO17G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MSSVPPSPPPAASSSTPTAPAVGSPCLQQALKKARLVLRDPVVKLRALPT
IRERCHVIYAAAKQDELEHFALHEEKLGEVVDYVHVVIQERFPEGMNAVP
NHSRYRHFEAGNLDRLSQLRAASGEQGVDAREIARRLVDLVVVSVLLDAG
AGDKWKYMEEGTRQTITRSEGLGVASFHMFMAGAFSSASEEGSKMQADAV
GLQGLTTEAIKRGFQVDGEANPLVGADGRADLLRRLGKALEEHPEFFSSV
LAEEKEGGVASFRPGYLVDYLFAQAKPGSEPAEVTVHDLWQAVMYGLESI
WPAGRTVVEGKNMGDVWPHSALLKHTEMDGRGDGEDGEEEGEDATRGLVP
FHKLSQWLTYSLLEPLGEAGMLFTDTTHLTGLPEYRNGGLFVDLGVLVPK
RASILDSSGHLPDSEVIVEWRALTVVLLDEVARLLRIKVGETEEGLPLVK
VLEGGTWTAGRKIAKALRPETGGPPITIVSDGTVF*
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Synonyms
Publications