NO17G00890, NO17G00890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00890 vs. NCBI_GenBank
Match: EWM21112.1 (zinc finger protein [Nannochloropsis gaditana]) HSP 1 Score: 693.7 bits (1789), Expect = 8.200e-196 Identity = 462/826 (55.93%), Postives = 521/826 (63.08%), Query Frame = 0 Query: 122 LLLLLFLASNPLPTSGLAEWQKLWAAPSPNPGTNTSTPAPPNRQSHGMTVWKDTMLVHGGVGANRVGLSDLWAFDLTTHVWQNVSQKVTPADPVYYRAAHSFFAREEAGAGEGEAPTLGLYVWGGREMPEGDSALGTTKATNQLLKFVMAAPMEGGGEDWKEGGHWIPVATTSAETADPAFSAGPVGRSDHTGILFKNPATGKEHFLVYGGRLVEPSGVAVAAGSNSXXXXXXXXXXXGGQMAREVYGDMWSLDLETMVWTLLYAGGEKDGGPPARFLHASSVLIEEEGGEEVAKIVVFGGLTFFGNSLFALDDVWEFSIKDRTWRQQKMEVALLRSALPMLKAP---------XXXXXXXXXXXXXXXXXXXXXSVQVLYAFAGYVIYTSAGLAVVYNDLLVWDPRKPFWQKFVNPNGKPAPAPRFDHRGVVWRKEGSNEGGVLVFYGGSYQDVNDVADVWMIDAGGMEEGQLTKAPAEGLNALFAGRMMFILSSLVLMCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREERARVTEEALRSLPVVQYGRSDGSAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRESTPADDNRDMCAICLMDYVEEEMLRELPCGHRFHVQCVDQWFRSASSLSCPMCKARVTAPPSPSLITSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFRESRIQHRV---------SSSTTTSTPGADHRNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGAIPGXXXXXAEGESGHATGSYQPPDSLIPYHDMSLVEMQQPVAS 930 LLL + LA+ PLPT+ LAEWQK+WAAP N N+S P+PPNRQS GMT+WKDTMLV GG+G NR GL DLW+FDLTT VW+NVSQ+ +P DP+YYR+A SFF+R E G G TLGLY+WGGREMP GD+ G+T+ TN+LLKFV +E G +DW EGGHWI V T+SAET DPA S GP GRSDH+G+L+KN TGKE+F+VYGGR ++ G VA G+ + G MAREV+GD WSLD+ T WTLL+AGGE PP+RFLHA+S+L + +VVFGGLTF+G+SLFALDDVW F ++ RTW+ QKMEV LLRSALPML+ P XXXXXXXXXXXXXXX V +YAFAGYVIYTSAGLAVVYNDLLVWDP K +WQK N GK APAPRFDHRG+VWR G LVFYGGSYQDVNDV D+WMID MEE QL KAP EGLNALFAGRMMFILSSLVLMC XXXXXXXXXXXXX L LPV Y RS XXXXXXXXXXXXXXXXXXXXX DN+DMCAICLMDYVEEEMLRELPCGHRFHV CVDQWFRS+ SLSCPMCKARV A SPSL+ S S+ XXXXXXXXXXXX S+ STPG+ VGA PG A G+YQPPD LIPYHDMS+VEMQQPVA+ Sbjct: 16 LLLAILLATAPLPTAALAEWQKVWAAPPSN--VNSSAPSPPNRQSQGMTIWKDTMLVQGGLGLNRGGLGDLWSFDLTTRVWRNVSQQRSPTDPLYYRSAQSFFSRAEQGEA-GATATLGLYMWGGREMPGGDATQGSTQGTNKLLKFV----LEDGEDDWTEGGHWITVPTSSAETEDPA-SGGPAGRSDHSGLLYKNATTGKEYFVVYGGRKIDAKGKEVAVGAAA-----------GNSMAREVFGDTWSLDMSTKEWTLLHAGGE-GAAPPSRFLHAASILND-------TTMVVFGGLTFYGSSLFALDDVWLFDLRQRTWQPQKMEVNLLRSALPMLQGPLTVSAPAHAPIDDPAXXXXXXXXXXXXXXXXVPAMYAFAGYVIYTSAGLAVVYNDLLVWDPAKNYWQKLANKRGKTAPAPRFDHRGLVWR------GSTLVFYGGSYQDVNDVGDIWMIDTSLMEESQLVKAPPEGLNALFAGRMMFILSSLVLMCLCSAFLSLRMRRQMLQRARAAGGEGXXXXXXXXXXXXXXXXXXXXXXXXL--LPVRPYCRSSSE-----DEAGMAERGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDNKDMCAICLMDYVEEEMLRELPCGHRFHVGCVDQWFRSSGSLSCPMCKARVVA-TSPSLLPSSSTSTTASDIASPYVPSTGVAAHALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGARQSNANRSTPGS-------------------------ISPVLPASASRVGASPGPNGVAAGTNREGEGGTYQPPDDLIPYHDMSVVEMQQPVAT 775
BLAST of NO17G00890 vs. NCBI_GenBank
Match: XP_002296213.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64930.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 76.3 bits (186), Expect = 6.200e-10 Identity = 90/417 (21.58%), Postives = 157/417 (37.65%), Query Frame = 0 Query: 394 PPARFLHASSVLIEEEGGEEVAKIVVFGGLTF--------FGNSLFALDDVWEFSIKDRTWRQQKMEVALLRSALPMLKAPXXXXXXXXXXXXXXXXXXXXXSVQVLYAFAGYV----IYTSAGLAVVYNDLLVWDPRKPF------------WQKFVNP---NGKPAPAPRFDHRGVVWRKEGSNEGGVLVFYGGSYQDVNDVADVWMIDAGGME-EGQLTKAPAEGLNALFAGRMMFILSSLVLM------CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREERAR---VTEEALRSLPVVQYGRSDGSAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRESTPADDNR-DMCAICLMDYVEEEMLRELPCGHRFHVQCVDQWFRSASSLSCPMCK 773 P R HA++V+ +E +++ GG+ + G L+D+W F++ RTW+++ + LLRS ++ + V+ AF GY +++ +A V++D+LV P W K P +G + RF+H VV ++ GV+V +GG +QD +++ VW I+ GG + + L A ++G+ + + + + +++M X RAR + E + +LP Y S+ RG + T D+++ D C ICL++Y + + LR LPC H H CVD W ++ SCP C+ Sbjct: 1643 PRPRTAHAATVVGDE--------LIIHGGMGWNERTNDWDGGTDWKTLEDMWIFNLSTRTWKRRWLIPLLLRSYHSLV---GWNVEDSLLGADKGIQNLTSWTGPVVAAFGGYTTGIDVFSGEEVAYVFDDVLVSYPPPLIDEDDLGFLVDSPWLKASMPEYRDGDVMISNRFEHAAVV------SKEGVMVVWGGQFQDTSNLKGVWAINLGGRDSQVSLVMAESDGIYDEYDATITALHTFVIMMXXXXXXXXLILGMTQRYNELLQQANADAEIAGMAFAARDVGGDAPSAHRARGRGLHPEIIATLPEKIYSSSESD-------------------------------------RGEDGTVDDEDKDDCCPICLVEYEDGDELRVLPCNHYMHKVCVDAWL--GNNPSCPSCR 2003
BLAST of NO17G00890 vs. NCBI_GenBank
Match: CCI40171.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 75.1 bits (183), Expect = 1.400e-9 Identity = 97/415 (23.37%), Postives = 155/415 (37.35%), Query Frame = 0 Query: 370 DMWSLDLETMVWTLLYAGGEKDGGPPARFLHASSVLIEEEGGEEVAKIVVFGGLTFFGNSLFALDDVWEFSIKDRTWRQQKMEVALLRSALPMLKAPXXXXXXXXXXXXXXXXXXXXXSVQVLYAFAGYVIYTSAGLAVVYN-------DLLVWDPRKPFWQKFVNPNG---KPAPAPRFDHRGVVWRKEGSNEGGVLVFYGGSYQDVNDVADVWMIDAGGMEEGQLTKAPAEGLNALFAGRMMFILSSLVLMCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREERARVTEEALRSLPVVQYGRSDGSAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRESTPADDN--RDMCAICLMDYVEEEMLRELPCGHRFHVQCVDQWFRSASSLSCPMCK 773 D+WS DLET W + DG P+R S L++ G ++ ++V+ G ++ ALDD W +SI ++ W + + ++ R ++ + L+ +GYV + + N + K K G P R++H+ VVW + +V YGGSYQ V DVW + Q ++ + +L ++IL XXXXXXXXX V++E L+ L +++Y + S G + P N D+C ICL+++ EEE +R+L C H FHV C+D+W R +++CPMCK Sbjct: 4561 DLWSYDLETKTWIEI---RPVDGIVPSRRFSHSVTLVKHSG---LSYLLVYSGRHLQQSTWSALDDTWLYSISEKRWIKVQSSSSIPRMYTSIITT------------GDKNFWFFGGYYRPLHTMSGYVFDDTVSGELNINSGSASDSSITATPVTKGVSMKLYTAVGGINSAIPPLRYNHQAVVWNE-------AIVVYGGSYQTVR--GDVWSYNTTLAVLSQDVNMFSKKITSL-----IYILGGXXXXXXXXXXXXXXRWRQVDQRNLQMRQLHG-------------PNTRGVSQEKLQQLEILKYQKPVKSVNS---------------------ASECAKNVPSSNRTGLDEIPICLNLDEDVCPICLVEFEEEENIRKLHCTHIFHVPCIDEWLR--RNVTCPMCK 4907
BLAST of NO17G00890 vs. NCBI_GenBank
Match: XP_008605201.1 (hypothetical protein SDRG_01454 [Saprolegnia diclina VS20] >EQC41487.1 hypothetical protein SDRG_01454 [Saprolegnia diclina VS20]) HSP 1 Score: 73.2 bits (178), Expect = 5.300e-9 Identity = 82/315 (26.03%), Postives = 117/315 (37.14%), Query Frame = 0 Query: 135 TSGLAEWQKLWAAPSPNPGTNTSTPAPPNRQSHGMTVWKDTMLVHGGVGANRVGLSDLWAFDLTTHVWQNVSQKVTPADPVYYRAAHSFFAREEAGAGEGEAPTLGLYVWGGREMPEGDSALGTTKATNQLLKFVMAAPMEGGGEDWKEGGHWIPVATTSAETADPAFSAGPVGRSDHTGILFKNPATGKEHFLVYGGRLVEPSGVAVAAGSNSXXXXXXXXXXXGGQMAREVYGDMWSLDLETMVWTLLYAGGEKDGGPPARFLHASSVLIEEEGGEEVAKIVVFGGLTFFGNSLFALDDVWEF---SIKDRTW 447 T+ +E L AAPS +P PP R S + V DT +++GG A R+ +D W FDL W V PA A + A A E L V+GG G SA G + N + F + + W PV +S +A P RS+ T ++ TG +V G + P ++ + + D+W++DL T WT L P ARF HA+S + + V +V+F G N L D W S + R W Sbjct: 2 TTSASEVWSLLAAPSFSP------TYPPPRDSSTLQVLGDTAIIYGGTSAQRI-FNDTWLFDLVAESWTQV-----PAHQTNPGARFDHVSVAHASAQE-------LVVFGGTLYAPGTSADGYVQ-MNDVWVFSLQHRV------------WTPVVYSSQ-------AALPKTRSEATAVV-----TGDGSAMVVSGGVTVPDNASLYSYPID-------------------FNDVWAMDLTTHTWTELTTSAASP-QPAARFSHAASTITV----DGVEHLVIFSGRHILVNGWTILSDAWMLPLNSTEPRVW 248
BLAST of NO17G00890 vs. NCBI_GenBank
Match: PNX62114.1 (RING-H2 finger protein ATL52-like [Trifolium pratense]) HSP 1 Score: 72.4 bits (176), Expect = 9.000e-9 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0 Query: 715 RGRESTPADDNRDMCAICLMDYVEEEMLRELP-CGHRFHVQCVDQWFRSASSLSCPMCKARVTAPPSPSL 784 R + ADD+ D CA+CL D+ E E L+ +P C H FHV C+D+W S S SCP+C+A +A PSP++ Sbjct: 79 RNKPDVVADDDGDTCAVCLGDFEEGEELKTMPECLHSFHVPCIDKWLNSHS--SCPICRASASAAPSPAV 146
BLAST of NO17G00890 vs. NCBI_GenBank
Match: XP_002907505.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64069.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 72.0 bits (175), Expect = 1.200e-8 Identity = 61/288 (21.18%), Postives = 109/288 (37.85%), Query Frame = 0 Query: 492 LYAFAGYVIYTSAGLAVVYNDLLV----WDPRKPFWQKFVNPNGKPAPAPRFDHRGVVWRKEGSNEGGVLVFYGGSYQDVNDVADVWMIDAGGMEEGQLTKAPAEGLNALFAGRMMFILSSLVLMCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREERARVTEEALRSLPVVQYGRSDGSAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRESTPADDNRDMCAICLMDYVEEEMLRELPCGHRFHVQCVDQWFRSASSLSCPMCKARV 776 ++ F GY + VY D+++ ++ RK + V + +P R++HR +WR G +V +GGSYQ + + DVW+ + +T A + ++++L + ++ VT+E L L + +Y R++ + S + +N D+C ICL+++ + E +R LPC H FHV C+D+W + + SCPMCK+ V Sbjct: 294 MWFFGGYYKPQKSSSGYVYEDIVLGKFDFENRKMEARHAVTESDSASPPLRYNHRAALWR------GDSMVIHGGSYQ--SQLGDVWVYNT----TNAVTTDAATSTLPIDPESLVYVLGAFIVTVVFVLLALLVRWRRADRRNLRAAQIRGAAVVRG------------VTKERLDQLRITKYNRAERNPESPTELL------------------------------SPTSVGSIENEDICPICLIEFEDGEDVRNLPCKHIFHVACIDEWLK--RNTSCPMCKSNV 525
BLAST of NO17G00890 vs. NCBI_GenBank
Match: XP_020164460.1 (RING-H2 finger protein ATL8-like [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 71.2 bits (173), Expect = 2.000e-8 Identity = 35/70 (50.00%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 716 GRESTPADDNRDMCAICLMDYVEEEMLRELP-CGHRFHVQCVDQWFRSASSLSCPMCKARVTAPPSPSLI 785 G TPA + CAICL +Y E E LR LP CGHRFHV CVD W R+ + +CP C+A + A P L+ Sbjct: 107 GPSPTPATCSSLECAICLAEYTEGEALRVLPRCGHRFHVACVDAWLRTCA--TCPSCRAPIVATPVQPLV 174
BLAST of NO17G00890 vs. NCBI_GenBank
Match: XP_005081484.1 (E3 ubiquitin-protein ligase ZNRF4 [Mesocricetus auratus]) HSP 1 Score: 70.9 bits (172), Expect = 2.600e-8 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0 Query: 727 DMCAICLMDYVEEEMLRELPCGHRFHVQCVDQWFRSASSLSCPMCKARVTA 778 D+CAICL DY E E+L+ LPC H +H +C+D WF A+ SCP+CK V + Sbjct: 207 DLCAICLDDYEEGELLKILPCAHAYHCRCIDPWFSRATRRSCPLCKQSVAS 257
BLAST of NO17G00890 vs. NCBI_GenBank
Match: ERE72781.1 (zinc/RING finger protein 4 [Cricetulus griseus]) HSP 1 Score: 70.9 bits (172), Expect = 2.600e-8 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0 Query: 727 DMCAICLMDYVEEEMLRELPCGHRFHVQCVDQWFRSASSLSCPMCKARVTA 778 D+CAICL DY E E+L+ LPC H +H +C+D WF A+ SCP+CK V + Sbjct: 207 DLCAICLDDYEEGELLKILPCAHAYHCRCIDPWFSRATRRSCPLCKQSVAS 257
BLAST of NO17G00890 vs. NCBI_GenBank
Match: XP_007616192.1 (PREDICTED: E3 ubiquitin-protein ligase ZNRF4 isoform X2 [Cricetulus griseus]) HSP 1 Score: 70.9 bits (172), Expect = 2.600e-8 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0 Query: 727 DMCAICLMDYVEEEMLRELPCGHRFHVQCVDQWFRSASSLSCPMCKARVTA 778 D+CAICL DY E E+L+ LPC H +H +C+D WF A+ SCP+CK V + Sbjct: 207 DLCAICLDDYEEGELLKILPCAHAYHCRCIDPWFSRATRRSCPLCKQSVAS 257 The following BLAST results are available for this feature:
BLAST of NO17G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00890 ID=NO17G00890|Name=NO17G00890|organism=Nannochloropsis oceanica|type=gene|length=3003bpback to top protein sequence of NO17G00890.1 >NO17G00890.1-protein ID=NO17G00890.1-protein|Name=NO17G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1001bpback to top Synonyms
Publications
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