NO17G00840, NO17G00840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00840 vs. NCBI_GenBank
Match: XP_005854430.1 (heat domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21929.1 heat domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 223.8 bits (569), Expect = 2.400e-54 Identity = 121/217 (55.76%), Postives = 147/217 (67.74%), Query Frame = 0 Query: 9 TREGLDKLLFRLVMAEESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPPP----TTLVAHQVITAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLAFLLELFLDILLIPNAS 222 TR+ LDKLLFRLVMAE+SRIE LI HLP L+D++STT+D+ +RNKVVECCSHL+KRLRAD+KLQVPCD+LL KAR+P GAFT+NFALVFLEIGCPRLP + K+ LG ALL+GLAAEGT+++ + +GR QVALVH LE + F++P T A D+AFL ELFLDILL+PNAS Sbjct: 46 TRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVALVHCFLETVAFLRPGTGASFTATQASASSMTAPSSGTRSPVREDAGQTPLGSRVSECTLPHPSAQDMAFLRELFLDILLVPNAS 262
BLAST of NO17G00840 vs. NCBI_GenBank
Match: EWM21143.1 (heat domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 201.8 bits (512), Expect = 9.700e-48 Identity = 97/134 (72.39%), Postives = 118/134 (88.06%), Query Frame = 0 Query: 9 TREGLDKLLFRLVMAEESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVAL 143 TR+ LDKLLFRLVMAE+SRIE LI HLP L+D++STT+D+ +RNKVVECCSHL+KRLRAD+KLQVPCD+LL KAR+P GAFT+NFALVFLEIGCPRLP + K+ LG ALL+GLAAEGT+++ + +GR QVAL Sbjct: 8 TRDDLDKLLFRLVMAEDSRIEGLIRLHLPMLMDLMSTTSDEGIRNKVVECCSHLLKRLRADNKLQVPCDVLLEKARSPVNGAFTKNFALVFLEIGCPRLPAEAKNALGWALLVGLAAEGTADEAKPFGRHQVAL 141
BLAST of NO17G00840 vs. NCBI_GenBank
Match: CBN79717.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 135.6 bits (340), Expect = 8.600e-28 Identity = 181/710 (25.49%), Postives = 273/710 (38.45%), Query Frame = 0 Query: 11 EGLDKLLFRLVMAEESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEF--IQPPPTTLVAHQVITAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLAFLLELFLDILLIPNASRLLPPSXXXXXXXXXXXXIPIHGLSHDALLRLSSHPSLWSSLXXXXXXXXXXXXXXXKLHVLRLLHSPLFTYPASL-PLLLIAATDSETRVKEKAESLVKLETDARATNKSSLPSSLRRSLDKELADRLLRLFLGG----------------PSLPPALPRTLISDPMRIKLLEWGMREVPEALVEETGLCLKAA-LTVXXXXXXXXXXXXXXXXXXXXXXXGIAIRALGARLAAFVAVRCPPSPFALAGPLLLAAVKKVLVGCYQSLLLQRGIGGGGRGPERGREGSALDREVV----LREGCYETLAALAHRMGGGAVHLRHXXXXXXXXXXXXXXXXXXXXRVGEPGPCVAAAQVQAQPQLLFSDPLLLRLLFEALASEGPVQAIKVAEALGALRTAYLPAQQKLGRPPLEMSQFLPLLSQAAFHPQPRARLAAVEWSITALPPSLSLPRCLCLYLLDDPVQSVRKAATAGLNVPFLPTTRAGEEDEVPAYLEA 697 E LD++L RLV+A++S++ ++ LP L+ L+ ++ VR KV++ SH+ KR+R ++ +++PC LL + +F NF+L FLE+G PRL P + ++G + G++ + Y L++ LL V+E ++ P T + D A + E FLD+ L P RL GLS L RL+S W + KL V+R L S LF+ A++ P + A + V + +E L+K + + S +L+R D +A LL L LGG + ++ L W E P ++ + L + +RA GARLAAFVA RC + + GPLLL AV++VLV V + E CYE +A+LA R +P++ D + RLLF L+++ P +K++ ALGAL+ AY A G L S+ LL AA P+ RARL A+EW+ S R LC+ L DD V +VR AAT GL+ P + A E A +A Sbjct: 10 EQLDRVLHRLVIADDSKLSPVLDILLPKLVRKLNGSS-PRVRAKVIDVLSHVSKRVRPNASIELPCSGLLAVCKEVPLNSFAFNFSLSFLEMGVPRLTPTAQGKIGLQIASGIS------RLEQYSPASNILLNLLLVVVEHLPLRLPGETQEEEAAV----------------------RDTAATEVAELAREDSAVVSEWFLDVCLYPGVLRL--------------EGSRYDGLSPAGLARLTSKEKEWPA----------DLLTRRKLAVVRGLKSDLFSPAATVAPAVAAAGCSTHHEVLKASEDLLK------SLSSSDRHGALQR--DPAVALGLLNLVLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVRALAWLEAECPGGTAARVPEAVRVSFLALFTADGPAAGADRAPGARHHDRANAARLRAAGARLAAFVAARCNAAMLPMVGPLLLQAVQRVLVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVQHGAMLEACYEAIASLAVR----------------------------------------------RPEIFAGDTSVPRLLFLELSAKEPSLRVKISAALGALKGAYRAA----GGDNL-ASELWSLLWGAAASPEHRARLCAIEWACDLFDFSDVAARRLCVSLCDDKVTAVRSAATRGLHPPRASASHAPAAAEGVAAADA 607
BLAST of NO17G00840 vs. NCBI_GenBank
Match: XP_013909560.1 (PREDICTED: proteasome-associated protein ECM29 homolog [Thamnophis sirtalis]) HSP 1 Score: 81.3 bits (199), Expect = 1.900e-11 Identity = 55/162 (33.95%), Postives = 94/162 (58.02%), Query Frame = 0 Query: 2 AVSALPSTREGLDKLLFRLVMAE-ESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPPPTTLVA 163 A SA + L+++ RL AE + +++++I LP +L LS +T + VR KV+E HL KR+++ K+Q+P + LL++ + P+A +F NF ++++++G PRLP + + EL LL A EG + QQ +L+H L+ L ++ P L A Sbjct: 4 AASAAQDEQNQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLS-STQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPSAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL--TAMEGKPQP------QQDSLMHLLIPTLFHMKYPVEPLKA 156
BLAST of NO17G00840 vs. NCBI_GenBank
Match: XP_005441485.1 (PREDICTED: proteasome-associated protein ECM29 homolog [Falco cherrug]) HSP 1 Score: 80.9 bits (198), Expect = 2.500e-11 Identity = 54/156 (34.62%), Postives = 92/156 (58.97%), Query Frame = 0 Query: 8 STREGLDKLLFRLVMAE-ESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPPPTTLVA 163 ST L+++ RL AE + +++++I LP +L LS +T + VR KV+E HL KR+++ K+Q+P + LL++ + P+A +F NF ++++++G PRLP + + EL LL A EG + QQ +L+H L+ L ++ P L A Sbjct: 26 STNYQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLS-STQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPSAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL--TAMEGKPQP------QQDSLMHLLIPTLFHMKYPAEPLKA 172
BLAST of NO17G00840 vs. NCBI_GenBank
Match: XP_004423382.1 (PREDICTED: proteasome-associated protein ECM29 homolog isoform X1 [Ceratotherium simum simum]) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-11 Identity = 52/148 (35.14%), Postives = 89/148 (60.14%), Query Frame = 0 Query: 10 REGLDKLLFRLVMAE-ESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPP 157 R+ L+++ RL AE + +++S+I LP +L LS +T + VR KV+E HL KR+++ K+Q+P + LL++ + P A +F NF ++++++G PRLP + + EL LL A EG + QQ +L+H L+ L ++ P Sbjct: 7 RDQLERVFLRLGHAETDEQLQSIISKFLPPVLLKLS-STQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL--TAMEGKPQP------QQDSLMHLLIPTLFHMKYP 145
BLAST of NO17G00840 vs. NCBI_GenBank
Match: EOB00722.1 (Proteasome-associated protein ECM29-like protein, partial [Anas platyrhynchos]) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-11 Identity = 53/156 (33.97%), Postives = 93/156 (59.62%), Query Frame = 0 Query: 8 STREGLDKLLFRLVMAE-ESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPPPTTLVA 163 S+ + L+++ RL AE + +++++I LP +L LS +T + VR KV+E HL KR+++ K+Q+P + LL++ + P+A +F NF ++++++G PRLP + + EL LL A EG + QQ +L+H L+ L ++ P L A Sbjct: 1 SSADQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLS-STQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPSAVSFVTNFTIIYVKMGYPRLPVERQCELAPTLL--TAMEGKPQP------QQDSLMHLLIPTLFHMKYPAEPLKA 147
BLAST of NO17G00840 vs. NCBI_GenBank
Match: XP_004600357.1 (PREDICTED: proteasome-associated protein ECM29 homolog [Sorex araneus]) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-11 Identity = 52/148 (35.14%), Postives = 89/148 (60.14%), Query Frame = 0 Query: 10 REGLDKLLFRLVMAE-ESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPP 157 R+ L+++ RL AE + +++S+I LP +L LS +T + VR KV+E HL KR+++ K+Q+P + LL++ + P A +F NF ++++++G PRLP + + EL LL A EG + QQ +L+H L+ L ++ P Sbjct: 7 RDQLERVFLRLGHAETDEQLQSIISKFLPPVLLKLS-STQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL--TAMEGKPQP------QQDSLMHLLIPTLFHMKYP 145
BLAST of NO17G00840 vs. NCBI_GenBank
Match: XP_005239350.1 (PREDICTED: proteasome-associated protein ECM29 homolog [Falco peregrinus]) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-11 Identity = 53/154 (34.42%), Postives = 92/154 (59.74%), Query Frame = 0 Query: 10 REGLDKLLFRLVMAE-ESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPPPTTLVA 163 R+ L+++ RL AE + +++++I LP +L LS +T + VR KV+E HL KR+++ K+Q+P + LL++ + P+A +F NF ++++++G PRLP + + EL LL A EG + QQ +L+H L+ L ++ P L A Sbjct: 162 RDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLS-STQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPSAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL--TAMEGKPQP------QQDSLMHLLIPTLFHMKYPAEPLKA 306
BLAST of NO17G00840 vs. NCBI_GenBank
Match: XP_009675098.1 (PREDICTED: LOW QUALITY PROTEIN: proteasome-associated protein ECM29 homolog [Struthio camelus australis]) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-11 Identity = 54/160 (33.75%), Postives = 95/160 (59.38%), Query Frame = 0 Query: 4 SALPSTREGLDKLLFRLVMAE-ESRIESLIYFHLPHLLDMLSTTTDDTVRNKVVECCSHLIKRLRADSKLQVPCDILLIKARAPTAGAFTRNFALVFLEIGCPRLPPQGKSELGQALLLGLAAEGTSEKDRHYGRQQVALVHRLLEVLEFIQPPPTTLVA 163 +A S+ + L+++ RL AE + +++++I LP +L LS +T + VR KV+E HL KR+++ K+Q+P + LL++ + P+A +F NF ++++++G PRLP + + EL LL A EG + QQ +L+H L+ L ++ P L A Sbjct: 3 TACISSMDQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLS-STQEGVRKKVMELLVHLNKRIKSRPKIQLPVETLLVQYQDPSAVSFVTNFTIIYVKMGYPRLPVEKQCELAPTLL--TAMEGKPQP------QQDSLMHLLIPTLFHMKYPVEPLKA 153 The following BLAST results are available for this feature:
BLAST of NO17G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00840 ID=NO17G00840|Name=NO17G00840|organism=Nannochloropsis oceanica|type=gene|length=3472bpback to top protein sequence of NO17G00840.1 >NO17G00840.1-protein ID=NO17G00840.1-protein|Name=NO17G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=997bpback to top Synonyms
Publications
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