NO17G00670, NO17G00670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00670 vs. NCBI_GenBank
Match: EWM21163.1 (cytosine deaminase [Nannochloropsis gaditana]) HSP 1 Score: 230.3 bits (586), Expect = 5.500e-57 Identity = 117/169 (69.23%), Postives = 132/169 (78.11%), Query Frame = 0 Query: 48 MATSSPPPS---HIDHDAIYLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSGQSKE 214 MAT P P+ + D IYLQQAL EA+ GL EGGIPIGAVLV G R VLG GHN+RVQK S +LHGE+DCLENAGR PASVY+ CTMYTTLSPCSMCSGAILLFGIPRVVVGEN+TF+GAE++L A GVEVIV QD CV IM EF++E+ LWEED G+ E Sbjct: 1 MATQKPQPATREKENEDDIYLQQALEEAKVGLNEGGIPIGAVLVHEGTDGVRHVLGMGHNQRVQKKSPVLHGEMDCLENAGRCPASVYRKCTMYTTLSPCSMCSGAILLFGIPRVVVGENQTFLGAEEHLRANGVEVIVVQDASCVAIMKEFVREHKVLWEEDIGEPSE 169
BLAST of NO17G00670 vs. NCBI_GenBank
Match: OGU67358.1 (tRNA-specific adenosine deaminase [Ignavibacteria bacterium GWC2_38_9] >OGV07598.1 tRNA-specific adenosine deaminase [Ignavibacteria bacterium RIFOXYB2_FULL_37_11] >OGV10760.1 tRNA-specific adenosine deaminase [Ignavibacteria bacterium RIFOXYA2_FULL_38_8] >OGV12601.1 tRNA-specific adenosine deaminase [Ignavibacteria bacterium RIFOXYC2_FULL_38_25] >OGV26859.1 tRNA-specific adenosine deaminase [Ignavibacteria bacterium RIFOXYC12_FULL_38_8] >OGV78866.1 tRNA-specific adenosine deaminase [Melioribacter sp. GWF2_38_21]) HSP 1 Score: 198.4 bits (503), Expect = 2.300e-47 Identity = 93/146 (63.70%), Postives = 117/146 (80.14%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSG 210 ++Q A+ EAQ+GLEEGGIPIG+V+V + ++LG+GHNRRVQKGS ILHGE+D ENAGR PASVYK C +YTTLSPC MCSGAI+L+GIP+V++GENKTFMG E++L ++GVEV V QDE C+ +MT FI + LW ED G Sbjct: 4 FMQAAIEEAQKGLEEGGIPIGSVIVHK-----GKILGRGHNRRVQKGSVILHGEMDAFENAGRQPASVYKECVLYTTLSPCPMCSGAIILYGIPKVIIGENKTFMGEEEHLKSRGVEVEVLQDETCINMMTNFIADKPTLWSEDIG 144
BLAST of NO17G00670 vs. NCBI_GenBank
Match: OLC08886.1 (tRNA-specific adenosine deaminase [Gemmatimonadetes bacterium 13_1_40CM_66_11] >OLD15352.1 tRNA-specific adenosine deaminase [Acidobacteria bacterium 13_1_40CM_3_65_5]) HSP 1 Score: 198.4 bits (503), Expect = 2.300e-47 Identity = 93/146 (63.70%), Postives = 119/146 (81.51%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSG 210 +L A+ EA+QGL EGGIPIG+V+V R +++G+GHNRRVQKGSA+LHGE+D LENAGR PASVY+ T+YTTLSPC+MCSGAILL+GIPRV++GENKTF+G E LS +GV + V+QD C+++MTEFI+ + ELW ED G Sbjct: 6 FLAAAIAEAEQGLREGGIPIGSVIVSR-----GKIIGRGHNRRVQKGSAVLHGEVDALENAGRQPASVYRGATLYTTLSPCAMCSGAILLYGIPRVIIGENKTFVGEEGLLSGRGVSLEVRQDPTCIRMMTEFIRTHPELWNEDIG 146
BLAST of NO17G00670 vs. NCBI_GenBank
Match: WP_017937909.1 (nucleoside deaminase [Pseudomonas thermotolerans]) HSP 1 Score: 196.4 bits (498), Expect = 8.800e-47 Identity = 96/147 (65.31%), Postives = 118/147 (80.27%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSGQ 211 ++Q A+ EA+QGLEEGGIPIG+VLV R R++G+GHNRRVQKGSA LHGE+D LENAGRLPASVY+ +YTTLSPC MCSGAILL+GIPRVVVGEN+TFMG E+ L A+GV+V V QDE C+++M FI+ +W ED G+ Sbjct: 4 FMQAAIDEARQGLEEGGIPIGSVLVHR-----GRIIGRGHNRRVQKGSATLHGEMDALENAGRLPASVYRDAVLYTTLSPCPMCSGAILLYGIPRVVVGENRTFMGEEELLRARGVQVEVLQDERCIELMRTFIERYPAVWNEDIGE 145
BLAST of NO17G00670 vs. NCBI_GenBank
Match: WP_045225507.1 (nucleoside deaminase [Methyloterricola oryzae]) HSP 1 Score: 196.4 bits (498), Expect = 8.800e-47 Identity = 96/146 (65.75%), Postives = 119/146 (81.51%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSG 210 +L+ A+ EA++GL EGGIPIG+V+V GG R++G+GHNRRVQ GSAILHGE+D LENAGR PASVY+ CT+YTTLSPC+MCSGAILL+GIPRVV+GEN+TFMG ED L A+GV + V DE CV++M +FI + ELW ED G Sbjct: 4 FLRAAIEEAEKGLAEGGIPIGSVIV---HGG--RIIGRGHNRRVQSGSAILHGEMDALENAGRQPASVYRECTLYTTLSPCAMCSGAILLYGIPRVVIGENRTFMGEEDLLRARGVSLEVVDDETCVRLMRDFIAAHGELWNEDIG 144
BLAST of NO17G00670 vs. NCBI_GenBank
Match: OYX23869.1 (tRNA-specific adenosine deaminase [Algoriphagus sp. 32-45-6]) HSP 1 Score: 195.7 bits (496), Expect = 1.500e-46 Identity = 93/147 (63.27%), Postives = 117/147 (79.59%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSGQ 211 +LQ A+ EAQ GL+EGGIPIG+VLV R ++LG+GHN+RVQ+ S LHGE+D LENAGR PASVY+ CT+YTTLSPC MC+GAILL+GIP+VV+GEN+TF+G+E+ L GVEVIVK D C+Q+M EFI +N LW ED G+ Sbjct: 4 FLQAAIEEAQTGLQEGGIPIGSVLVYR-----GQILGRGHNKRVQQKSVTLHGEMDALENAGRQPASVYRECTLYTTLSPCPMCTGAILLYGIPKVVIGENQTFLGSEELLKENGVEVIVKNDPTCIQLMEEFIAKNPALWNEDIGE 145
BLAST of NO17G00670 vs. NCBI_GenBank
Match: WP_102653363.1 (nucleoside deaminase [Halomonas endophytica] >PMR75349.1 tRNA-specific adenosine deaminase [Halomonas endophytica]) HSP 1 Score: 195.3 bits (495), Expect = 2.000e-46 Identity = 95/147 (64.63%), Postives = 117/147 (79.59%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSGQ 211 Y+Q AL EA+QGL EGGIPIG+VLV R R+LG+GHNRRVQ GS +LHGE+D LENAGR ASVY+ C +YTTLSPC MCSGAILL+GIP+VVVGEN+TFMG E+ L ++GVEV + Q E C+++MT FI+ + ELW ED G+ Sbjct: 4 YMQAALEEARQGLTEGGIPIGSVLVHR-----GRILGRGHNRRVQSGSTVLHGEMDALENAGRQAASVYRDCVLYTTLSPCPMCSGAILLYGIPKVVVGENRTFMGEEELLRSRGVEVEIIQSEECIELMTGFIEASPELWNEDIGE 145
BLAST of NO17G00670 vs. NCBI_GenBank
Match: WP_107037200.1 (nucleoside deaminase [Brumimicrobium mesophilum]) HSP 1 Score: 195.3 bits (495), Expect = 2.000e-46 Identity = 95/146 (65.07%), Postives = 114/146 (78.08%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSG 210 + +A+ EA+ G+ EGGIPIG+VLV +VLG+GHN+RVQKGS ILHGE+D LENAGRLPASVYK C +YTTLSPC MCSG ILL+GIP+VV+GENKTF+GAE +L GVEVIV D+ C ++M EFI EN ELW ED G Sbjct: 4 FFLEAVKEAEIGIAEGGIPIGSVLV-----HNGKVLGRGHNKRVQKGSVILHGEMDALENAGRLPASVYKECVLYTTLSPCPMCSGTILLYGIPKVVIGENKTFLGAEKHLKENGVEVIVLDDKRCKELMDEFIAENPELWNEDIG 144
BLAST of NO17G00670 vs. NCBI_GenBank
Match: WP_026903822.1 (nucleoside deaminase [Pedobacter glucosidilyticus]) HSP 1 Score: 194.5 bits (493), Expect = 3.300e-46 Identity = 91/146 (62.33%), Postives = 115/146 (78.77%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSG 210 +++ A EA++G EEGGIPIG+VLV +++G+GHN+RVQKGS ILHGE+D LENAGRLPA +Y+ CT+YTTLSPC MCSG ILL+GIPRVV+ ENKTFMG E+ LS++GV+V+V EGC Q+M +FIKE LW ED G Sbjct: 4 FMEAAFEEAKKGYEEGGIPIGSVLV-----HDGKIIGRGHNKRVQKGSVILHGEMDALENAGRLPAKIYQECTLYTTLSPCPMCSGTILLYGIPRVVIAENKTFMGEEELLSSRGVKVLVTHHEGCYQLMQQFIKEKPNLWNEDIG 144
BLAST of NO17G00670 vs. NCBI_GenBank
Match: PKL82461.1 (tRNA-specific adenosine deaminase [Ignavibacteriae bacterium HGW-Ignavibacteriae-3]) HSP 1 Score: 194.5 bits (493), Expect = 3.300e-46 Identity = 94/146 (64.38%), Postives = 116/146 (79.45%), Query Frame = 0 Query: 64 YLQQALIEAQQGLEEGGIPIGAVLVLREAGGTRRVLGKGHNRRVQKGSAILHGEIDCLENAGRLPASVYKMCTMYTTLSPCSMCSGAILLFGIPRVVVGENKTFMGAEDYLSAQGVEVIVKQDEGCVQIMTEFIKENAELWEEDSG 210 ++Q A+ EAQ G EGGIPIG+VLV + +++G+GHNRRVQKGSAILHGE+D LENAGRLPASVYK T+YTTLSPC MCSGAILL+GIP+V+VGEN TFMG E++L ++GV V V DE C+ +MT+FI+E LW ED G Sbjct: 4 FMQAAIEEAQLGFNEGGIPIGSVLVY-----SGKIIGRGHNRRVQKGSAILHGEMDALENAGRLPASVYKESTLYTTLSPCPMCSGAILLYGIPKVIVGENITFMGEEEHLKSRGVSVEVLDDETCINLMTKFIEEKPALWNEDIG 144 The following BLAST results are available for this feature:
BLAST of NO17G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00670 ID=NO17G00670|Name=NO17G00670|organism=Nannochloropsis oceanica|type=gene|length=1123bpback to top protein sequence of NO17G00670.1 >NO17G00670.1-protein ID=NO17G00670.1-protein|Name=NO17G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top Synonyms
Publications
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