NO17G00630, NO17G00630 (gene) Nannochloropsis oceanica

Overview
NameNO17G00630
Unique NameNO17G00630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4320
Alignment locationchr17:222170..226489 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:222170..226489 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
Vocabulary: INTERPRO
TermDefinition
IPR027640Kinesin-like_fam
Homology
BLAST of NO17G00630 vs. NCBI_GenBank
Match: XP_005854801.1 (hypothetical protein NGA_0355200, partial [Nannochloropsis gaditana CCMP526] >EKU21557.1 hypothetical protein NGA_0355200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 164.1 bits (414), Expect = 2.700e-36
Identity = 145/165 (87.88%), Postives = 149/165 (90.30%), Query Frame = 0
Query:  633 GPRGAPGAANALKGLKMGFCGAEGCKKVAIYGNEGQRAEFCSKHRPEGMGMVDLVNRKCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXINVTGSLCDFEACVKRASYGWIDPLDPGKKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKKAIVCAEH 798
            GPRGAPGAANALKGLKMGFC A+GCKKVAIYG EG RAEFCSKHR E  GMVDL+NRKCEA XXXXXXXXXXXXXXXXXXXXXXXX   INVTGSLCDF  CVKRASYGW DP DPGKK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTK+A+VCAEH
Sbjct:  463 GPRGAPGAANALKGLKMGFCTADGCKKVAIYGKEGARAEFCSKHRNEMEGMVDLINRKCEAGXXXXXXXXXXXXXXXXXXXXXXXXPKMINVTGSLCDFGDCVKRASYGWKDPADPGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKRALVCAEH 627          
BLAST of NO17G00630 vs. NCBI_GenBank
Match: EWM21165.1 (hypothetical protein Naga_100108g9 [Nannochloropsis gaditana])

HSP 1 Score: 164.1 bits (414), Expect = 2.700e-36
Identity = 145/165 (87.88%), Postives = 149/165 (90.30%), Query Frame = 0
Query:  633 GPRGAPGAANALKGLKMGFCGAEGCKKVAIYGNEGQRAEFCSKHRPEGMGMVDLVNRKCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXINVTGSLCDFEACVKRASYGWIDPLDPGKKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKKAIVCAEH 798
            GPRGAPGAANALKGLKMGFC A+GCKKVAIYG EG RAEFCSKHR E  GMVDL+NRKCEA XXXXXXXXXXXXXXXXXXXXXXXX   INVTGSLCDF  CVKRASYGW DP DPGKK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTK+A+VCAEH
Sbjct:  427 GPRGAPGAANALKGLKMGFCTADGCKKVAIYGKEGARAEFCSKHRNEMEGMVDLINRKCEAGXXXXXXXXXXXXXXXXXXXXXXXXPKMINVTGSLCDFGDCVKRASYGWKDPADPGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKRALVCAEH 591          
The following BLAST results are available for this feature:
BLAST of NO17G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
XP_005854801.12.700e-3687.88hypothetical protein NGA_0355200, partial [Nannoch... [more]
EWM21165.12.700e-3687.88hypothetical protein Naga_100108g9 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004781NSK004781Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00630.1NO17G00630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|170025gene_7822Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100108g9gene9263Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00630.1NO17G00630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00630 ID=NO17G00630|Name=NO17G00630|organism=Nannochloropsis oceanica|type=gene|length=4320bp
ACAGGCAGCAAAAAGCGCGCAGAAGACAGGCACCTTACTGCCCCGCACAA
GGGTGCGGTCAGCAGCAATCATGGACGAGgtgagcaaggatgtgcgtgtg
gtttgtcgattggttggttgccaggcgaaagatacttttgcatgagtctt
tgccagtgcttgttgagctgcccctatcacgggtgtggtggaggcattaa
gtgtgcaatataatgtgcccttattgcgtgcttattgtgtgtacttaagg
cactgtagaggacaagtcgtccccgtgcagatataatcccaggtttcggc
aacatttcgccctcccctctttactcatcacctcccttccttctcaaaag
cagACCACACATGACCACCACCATCACCACCACGACCACCTTCACGCGGT
GAACGTTCACGAGGATGAAGAAGATGAGGGAGAGGGGATGGAGGAAGACA
TGCTCCACCAGCACACCCGTCATCACCACCACTTTTCCACGGAAGGCGTG
GTGGAGGAGGAGGATGACGACCCGCACCACCACCACCACCACCATGACCA
CCACCACCAGTCGCTTTTGCCTGTGATGGAGGGGCCGGCAGAGGGAGGGG
GGGTGAATGGCGTGCTAGTTGGGGCGGTGGGTGTTCAGAAGCGACGCTCG
CGGAGCGAGGCTGAATCAGAAGCCGTGGCGGCCATGACCATTACAACGAC
GACGGTAAACGCTGCGGCGGCTGCAGTGCAGAACGAGCAAGAGCAACACC
TTCATCACTTGAGCCCTCAACAGCAACAGCAGCACCAGCACCAGCAACAG
CAACAGCAACATCAGCAGCTTCAGGAGGAACAGCATCAGCAGCACCAGGA
GGAAGAGGAGGAGGAAGAGGATGATTTATCGGGTGTTGTGATTATGGCTG
ACGGTGGGGAGATAGACGGAGGAGGAGAAGGACGGACGGCTCGAATGGAA
AGAGGGGGTGAAGGACACGCCATGTATGAGGTGGAGGAGGAGCAACAGGA
GGAACGGCAGCAAGAGATGCACGCTCAGCAACATGGGCACCATGGCCACC
CGGAGCAGCAGCATCAGCAGCAGGAGCAGCAACAACACGTACAAGAGCAG
CGGTATCGTCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGCAGCAGCAGCAGCAGAAGCGACAGCAGCAAGAGCAGTACTATTCCG
ACGCTCCCCTCGCGCCTCAGATCATGGTGGAGGACCGCGAGCAGCAGCAA
CAGCAGCAACAGCAGCAACAGCAGCAGCAGCAACTACTCCACCAGCTGCC
GCACGTTATCATCGCTTCTGGCAACCAGCATGCCCAGCAGCAGCAGCAGC
AACAACAGCCGCACGACTATCACACAGAACACCATCCTCAGCACCAGCAG
CAGCAGCAGCAACAGCAGCAGCAGATGGTGCCCCCCAGTGCCCATCCCTC
AATGCCTCCCCATCTCCCTCATCAGCCCCATCCCAATTTTCATCACCTTA
CCATGGCAGCGCAAGAGCTCCACGTTACCCTTCCCCACATGCTCATGCAC
CCCCACGACCCACACCAGCAGCAGCAACAACAGCAGCATCATGACCAGCA
TCTTCATGCGCCATCCCATATGGGTGGTGGTGGTGGAGGAGGAGGGGGGG
GAAATGGGGGGGAGGGAGAGCATCATCACCACCACCAGCAGCAGCACCAC
CACCTTCAAAATCACCAGCATCCCTTGCATACTGCGCCCTTTGTCCCACA
GCCCATCATGGAGCAGCGACAACAACAAGAGCAGCAGCAGCAGCAACAAC
TACAACAACAACAACAGCAACAACTACAACAGCAGCAGCAGCAGCAGCAG
CAGCGACAGCAACAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCGTAAGGTGAAACAGGAGAAGGTGCGGCAAC
AACAAGGAGAACAACATATTGGGGACGGCACAGTTTCCTCCTCTCCCAAC
AGTAACAACGCCTACCACGACCGCTCATCGTCTACCTCCACTTCCCCATC
TTCTCCCTCTTCCACAAATGGCACACCTTCTCCCCCCTCCATCTCGGATG
GGACTCTCCCTCCTCCCCCTTCCTCCTCTATCTCGTCGGCTTCGTCCCCC
ATCACTACAAGCACTCGACGCAATCTCATTAACAGCAACGCCAACAGCAG
CAGCAGCAGCAGCAGCAGCAGTAGTAGTGGTAATCTCGCCGGCCCCCGAG
GCGCGCCTGGGGCAGCAAATGCACTCAAGGGTTTAAAAATGGGCTTTTGT
GGCGCGGAGGGCTGCAAAAAAGTCGCTATCTACGGGAATGAGGGGCAACG
GGCCGAATTCTGTTCTAAGCACAGACCCGAGGGGATGGGGATGGTAGACT
TGGTGAACCGAAAATGTGAGGCCGGACAAGGGTGTCAGAAGCGACCACAT
TATGGTTTCAAGGGTCAGAAGGCACTGTATTGCTCGGAGCACCGCCAGGC
CGAAATGATCAACGTGACTGGCTCCCTGTGTGATTTCGAGGCGTGCGTGA
AGCGGGCCAGCTATGGGTGGATTGACCCCCTCGACCCCGGGAAGAAGCGG
AGGACTCGCTGCGCAACGCACAAGGAAGAAGGTATGCTCGATGTAGCCCA
CCGCCTGTGCGAAGAACTGGGCTGTCAAAAATCTCCCTATTACGGGTACC
CTGACACCAAGAAGGCCATCGTCTGCGCCGAGCATCAACGGCCCCTGATG
GTGAGCATGACCCGTCGCTGCCATGTCGAGACGTGCAAGAAGCTTCCTTA
CTACGGACACGAAGGCCAGAAGGCGATCTCGTGTGCCTCGCACAAGAAGG
AGGGGATGGTGGATGTGGTGAGTAAAAAATGTGCCGATGCGTCGTGTCGG
ATCCAGCCATCCTATGCCCATCCTGGGGAAGCGCCCCGACATTGCGCGAA
GCACCGAGAGGAAGGAGAAGTGAACGTGGTCTCCCGCCGGTGTGATGTGA
AAGGCTGTGGAAAGGTTCCTACGTATGGTGAACCGGGGTTGAAGAAGCCG
GTGCGCTGTCGGGGCCACAGGGAGGAGCATCACGTGAATGTGGCTCATAA
GTTGTGCGATTTCCCCGAAGGATGCATGACGCAACCGTCGTTTGGTTTTG
ACGATGGGAAGGGAGCGACGAGGTGTACCCGTCATAAGGAGGAGGGGATG
AGGGATATGAAGAGTCGTCGGTGTGAAGTGGAGGGATGCTTTAAAAAGCC
GGTATACGCACGGGGGGAGGGGGAGGGAGGGAGTGGGGGGGGAGGGAAAC
CTGTGAGGTGTATGGAACACAAGGAGGAGGGTATGGTGCACTCGGTACCT
CTGCCGAGGCAGAGGAAGGGGAAGGGGGGAGAGGGAGGGAGGGGAGGGGT
AGTGGGGAATTCTCTCAATTGCAGCAGCAGTTATAGTTTGAATGAAGGAG
GAGCAGGAGGAGGCGGCGGGGGGACAGCAGCTATGGTGATATTGCCGCCG
CCGTTGCCGTTGGTGGTGGATGGCACGACGGGAGGAAGGGACACGGGGGG
AGTAGGTCTCACCCTGATGCCAGTCCTTGTTCCACTCGAAGAGCCCTTGG
TTATGGTTGAGGGAGGAGGGGGGGGAACAGGAGCAGCAGCGGGGGGGGAA
GGGAGGAAGCGCCCGAGGGCGGGGAGGGGAAGGGGGGTAGGAAGGGGAGG
AAGCGTAGGACGGCGCGTACGAGGGAAAGGTCGGGGGAAGGGTCAGCAAC
AGCAGCATGACGAGGAGGATGAGCAGGTAGAGGAGGATATTGAGGGGGAA
GAGGAGGGAGAGGACGAGGACGAGGAGGTGGAGGAGGGCCAGTTGGCGGC
TTCGGCGCCGGTGGAGCCGCAGGACGAGGAGGCGGCCGCCTTGTCATTGC
AAGCGATCGGGGTTGTGCCTATTGGTATTTAGATAGAGGAGAGGAAGAGG
TATGAAGAAGGGGAAGGAGGGTGAGTAGAATGGTAAATAAAGCCGTGTCG
ACCATTGTACGTGTGTGGAGAGAGTGTATGTCCGAAGCTGAGCAGGGGCC
ATGCAGGAAGAGCAACTCGAAGGAGGCCGCGTTCCTACTGCCTATTTATC
AACACCATACTTTCGGACTTTCGGAACGGGGCTATCAAGAAGAATTAGAT
AAGTGAAGGAGTCAGAGACCGAGAGGCAACGCGCGGAACAGTTGTAAAGA
AAGAATGATGCGTGGTCAGCAAAAAACAAGACAGAGTATGGAAAAAGATA
AACTAGCTTGTAAACACATAAGGGTGCCTCATTATGTTCCTGCAGGAGCG
TTGGCGTTTTGCTTTTGCCG
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protein sequence of NO17G00630.1

>NO17G00630.1-protein ID=NO17G00630.1-protein|Name=NO17G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1196bp
MDETTHDHHHHHHDHLHAVNVHEDEEDEGEGMEEDMLHQHTRHHHHFSTE
GVVEEEDDDPHHHHHHHDHHHQSLLPVMEGPAEGGGVNGVLVGAVGVQKR
RSRSEAESEAVAAMTITTTTVNAAAAAVQNEQEQHLHHLSPQQQQQHQHQ
QQQQQHQQLQEEQHQQHQEEEEEEEDDLSGVVIMADGGEIDGGGEGRTAR
MERGGEGHAMYEVEEEQQEERQQEMHAQQHGHHGHPEQQHQQQEQQQHVQ
EQRYRQQQQQEEEEEEEEEEQQQQQKRQQQEQYYSDAPLAPQIMVEDREQ
QQQQQQQQQQQQQLLHQLPHVIIASGNQHAQQQQQQQQPHDYHTEHHPQH
QQQQQQQQQQMVPPSAHPSMPPHLPHQPHPNFHHLTMAAQELHVTLPHML
MHPHDPHQQQQQQQHHDQHLHAPSHMGGGGGGGGGGNGGEGEHHHHHQQQ
HHHLQNHQHPLHTAPFVPQPIMEQRQQQEQQQQQQLQQQQQQQLQQQQQQ
QQQRQQQQQQQQQQQQQQQQQQQQQRKVKQEKVRQQQGEQHIGDGTVSSS
PNSNNAYHDRSSSTSTSPSSPSSTNGTPSPPSISDGTLPPPPSSSISSAS
SPITTSTRRNLINSNANSSSSSSSSSSSGNLAGPRGAPGAANALKGLKMG
FCGAEGCKKVAIYGNEGQRAEFCSKHRPEGMGMVDLVNRKCEAGQGCQKR
PHYGFKGQKALYCSEHRQAEMINVTGSLCDFEACVKRASYGWIDPLDPGK
KRRTRCATHKEEGMLDVAHRLCEELGCQKSPYYGYPDTKKAIVCAEHQRP
LMVSMTRRCHVETCKKLPYYGHEGQKAISCASHKKEGMVDVVSKKCADAS
CRIQPSYAHPGEAPRHCAKHREEGEVNVVSRRCDVKGCGKVPTYGEPGLK
KPVRCRGHREEHHVNVAHKLCDFPEGCMTQPSFGFDDGKGATRCTRHKEE
GMRDMKSRRCEVEGCFKKPVYARGEGEGGSGGGGKPVRCMEHKEEGMVHS
VPLPRQRKGKGGEGGRGGVVGNSLNCSSSYSLNEGGAGGGGGGTAAMVIL
PPPLPLVVDGTTGGRDTGGVGLTLMPVLVPLEEPLVMVEGGGGGTGAAAG
GEGRKRPRAGRGRGVGRGGSVGRRVRGKGRGKGQQQQHDEEDEQVEEDIE
GEEEGEDEDEEVEEGQLAASAPVEPQDEEAAALSLQAIGVVPIGI*
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Synonyms
Publications