NO17G00570, NO17G00570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00570 vs. NCBI_GenBank
Match: XP_005713068.1 (unnamed protein product [Chondrus crispus] >CDF33265.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-10 Identity = 57/217 (26.27%), Postives = 98/217 (45.16%), Query Frame = 0 Query: 170 LAIGVISGPQLAQKRRVRLLQDTWFTSLDSQRDGVLVFSDGADATVPAVGIPGTG----------------------STWQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFVT------------PQEGRLQGQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQGTGYGDGDLGLCI 353 +A GV +G ++A R L + W+ S+ +LV SD DA + VG+ + W+G +D+ LPA+ L FP +WY+L+DDDT++ N + +Q + E+ +Y G+ F++ + + +G FAHGGSG+V++A + ++ + E + E C GD +GLC+ Sbjct: 96 VAFGVKTGHEVAAHRLATLRRSGWW-SVGRDVPNILVVSDSDDADLGVVGLKAYAHDMLRVDNETHPREMPEKWWDKTGWRGDKDKNLPALHLLRTTFPGKKWYLLLDDDTYIFLDNFARYIMQQGM-----DEKPVYTGKVFFISRCGGFARDGTWAADKSKPKGM---FAHGGSGIVINAKAMEKVYSRLGECI---HEYC-SCWAGDMQVGLCM 299
BLAST of NO17G00570 vs. NCBI_GenBank
Match: ORZ33920.1 (hypothetical protein BCR44DRAFT_118307 [Catenaria anguillulae PL171]) HSP 1 Score: 70.5 bits (171), Expect = 1.500e-8 Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 0 Query: 227 WQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFVTPQEGRLQ-GQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQGTGYGDGDLGLCIK 354 W+ + +PA+ L +P AEWYV++DDDT++ NL +L + +E Y+G +G + G F HGGSG+VLS REM+ ++ E +V R GD LGLC++ Sbjct: 191 WKNDAHKNIPAIRELVNRYPGAEWYVMIDDDTYVFMENLNRVL------HPLNPDEPHYLGAPNTFRDCDGVTEMGDGPLFNHGGSGIVLSRGAAREMLKIVDECIV----RYHDCFAGDVRLGLCLR 308
BLAST of NO17G00570 vs. NCBI_GenBank
Match: XP_006676392.1 (hypothetical protein BATDEDRAFT_85009 [Batrachochytrium dendrobatidis JAM81] >EGF84283.1 hypothetical protein BATDEDRAFT_85009 [Batrachochytrium dendrobatidis JAM81] >OAJ37103.1 hypothetical protein BDEG_21171 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 57/191 (29.84%), Postives = 86/191 (45.03%), Query Frame = 0 Query: 211 ADATVPAVGIPGTGSTWQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIG-RTMFVTPQEGRLQGQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQGTGYGDGDLGLCIKVLRGVSVRHDACLHALGPKGSYEGQGGGEEVGWFGDGG--RPCSFHY 399 +D+ VP G W+ + LP L FP AEW+V++DDDT++ NL M+S+ E+ YIG R MF+ + G F HGGSG+VLS A +R MV + +V R + GD LC++ + + ++ H P ++ WF RP +FH+ Sbjct: 217 SDSVVPDQNSLG----WKADAHKNLPGFRALYNKFPNAEWFVMLDDDTYMFFDNLLNMVSD------LDPEKPYYIGARNMFIGCDGVKKWGDGPAFGHGGSGIVLSRAAIRTMVSNLDACIV----RYKTCWAGDVRTALCLRD-QNILLKDPKGFHISPPNDAF----------WFPKETCLRPITFHH 382
BLAST of NO17G00570 vs. NCBI_GenBank
Match: XP_005703461.1 (hypothetical protein Gasu_55110 [Galdieria sulphuraria] >EME26941.1 hypothetical protein Gasu_55110 [Galdieria sulphuraria]) HSP 1 Score: 69.3 bits (168), Expect = 3.400e-8 Identity = 51/181 (28.18%), Postives = 79/181 (43.65%), Query Frame = 0 Query: 205 LVFSDGADATVPAVGIPGTGSTWQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFVTPQE-----GRLQGQMLP-FAHGGSGVVL---SAALVREMVPLIMEVLVGERERCQGTGYGDGDLGLCIKVLRGVSVRHDACLHALGPKGSYE 377 L+ S + V + T + W +++ LP L FP +WY++ DDDTF L A+L + + E IY+G V E G G + P FAHGGSG+++ + + +M+P M +R Q GD +GLC + L V A+ PK ++ Sbjct: 180 LLLSSSSQKKTLEVTVDQTKTGWWQDREKNLPGFHMLWKKFPYMDWYIMCDDDTFFFLDGLAAILQHPIFQQAMREEIPIYMGNQFNVALCEGYDPSGMTNGTLNPWFAHGGSGIIVNYWALEALMDMIPWCM-------QRFQDCWAGDIKIGLCFQELGIQIVPMGTHFIAVDPKSFFD 353
BLAST of NO17G00570 vs. NCBI_GenBank
Match: ORX43262.1 (hypothetical protein BCR36DRAFT_415674 [Piromyces finnis]) HSP 1 Score: 67.8 bits (164), Expect = 9.800e-8 Identity = 53/183 (28.96%), Postives = 80/183 (43.72%), Query Frame = 0 Query: 227 WQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFVTPQEGRLQGQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERC----QGTGYGDGDLGLCIKVLRGVSVRHDACLHALGPKGSYEGQGGGEEVGWFGDGGRPCSFHYAFGEDRE 406 WQ + +PA L +P A+WYV+VDDDT++ SNLK LS +E++Y+G + P Q FAHGG+G++LS A M VG ++C GD L LC+ + G+ + H + Q E W P +FH+ F + ++ Sbjct: 165 WQLDVYKNIPAFKLLYDTYPNAKWYVMVDDDTYVFLSNLKKRLSFY------DPDEKLYLGAN-WPIPTGCYPSWQNARFAHGGAGIILSHA--------AMLAFVGNYDQCVHDFDDCYAGDVRLALCLNTV-GIRLNRFEHRHVNINWRGHSDQAPNLEYSWTEPCDLPLTFHHLFAKQQK 331
BLAST of NO17G00570 vs. NCBI_GenBank
Match: ORZ37435.1 (hypothetical protein BCR44DRAFT_1430228 [Catenaria anguillulae PL171]) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-7 Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = 0 Query: 227 WQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIG-RTMFVTPQEGRLQGQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQGTGYGDGDLGLCIKVLRGVSVRHDACLHAL 370 W+ ++LPA+ L FP A+WY++ DDD + NL LS K + Y+G T+FV + G+ FAHGGSG+++S A V +++ ++ + +V + C GD + LC++ R H+ C+ + Sbjct: 17 WKDDAVKFLPAIGLLHRTFPDADWYIIADDDIYFFTENLHHTLS------KFNPTDVHYMGIPTLFVGCDGVQKFGEGPAFAHGGSGILMSKAAVAKVLTVLDKCIV-KYHTCWA---GDITVALCMRDFR---YPHNPCIRPI 147
BLAST of NO17G00570 vs. NCBI_GenBank
Match: KNE61737.1 (hypothetical protein AMAG_06538 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 66.6 bits (161), Expect = 2.200e-7 Identity = 42/145 (28.97%), Postives = 70/145 (48.28%), Query Frame = 0 Query: 227 WQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFVTPQEGRLQ-GQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQG---TGYGDGDLGLCIKVLRGVSVRHDACLH 368 W+G +++LP + + A+P + WY+ VDDD++LI NL L+ K + Y G+ P G + + FAHGG+G+VLS A ++ + + +V + G G+ D GL K + +V H+ H Sbjct: 322 WRGDANKFLPGLMAMHEAYPDSPWYIFVDDDSYLIMENLHFHLT------KLDPQTPYYFGQAFLAGPCPGGISYKDHIVFAHGGAGIVLSNAGMKVLAKHADQCMVSYKTCWAGDVRVGHCMRDAGLPYKDVTEGNVFHNVAPH 460
BLAST of NO17G00570 vs. NCBI_GenBank
Match: KNE70644.1 (hypothetical protein AMAG_15400 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 66.6 bits (161), Expect = 2.200e-7 Identity = 42/145 (28.97%), Postives = 70/145 (48.28%), Query Frame = 0 Query: 227 WQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFVTPQEGRLQ-GQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQG---TGYGDGDLGLCIKVLRGVSVRHDACLH 368 W+G +++LP + + A+P + WY+ VDDD++LI NL L+ K + Y G+ P G + + FAHGG+G+VLS A ++ + + +V + G G+ D GL K + +V H+ H Sbjct: 228 WRGDANKFLPGLMAMHEAYPDSPWYIFVDDDSYLIMENLHFHLT------KLDPQTPYYFGQAFLAGPCPGGISYKDHIVFAHGGAGIVLSNAGMKVLAKHADQCMVSYKTCWAGDVRVGHCMRDAGLPYKDVTEGNVFHNVAPH 366
BLAST of NO17G00570 vs. NCBI_GenBank
Match: XP_005706381.1 (hypothetical protein Gasu_28570 [Galdieria sulphuraria] >EME29861.1 hypothetical protein Gasu_28570 [Galdieria sulphuraria]) HSP 1 Score: 65.9 bits (159), Expect = 3.700e-7 Identity = 39/124 (31.45%), Postives = 58/124 (46.77%), Query Frame = 0 Query: 235 LPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFV--------TPQEGRLQGQMLPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQGTGYGDGDLGL 351 LP + L FP AEWY+++DDDTF+ NL L E + Y G V E + + FAHGGSG++LS+ ++ +VP I + ++ QG +GD + L Sbjct: 232 LPGLVTLYNTFPDAEWYIMIDDDTFIFLDNLAQFLLEYSSNISSPLDVPFYFGNPFSVGIPSNNETWEDEEKSSSASISFAHGGSGILLSSKALKTIVPHIPWCM----KKWQGCPHGDARVAL 351
BLAST of NO17G00570 vs. NCBI_GenBank
Match: XP_015273452.1 (PREDICTED: chondroitin sulfate synthase 1 [Gekko japonicus]) HSP 1 Score: 65.9 bits (159), Expect = 3.700e-7 Identity = 54/195 (27.69%), Postives = 95/195 (48.72%), Query Frame = 0 Query: 170 LAIGVISGPQLAQKRRVRLLQDTWFTSLDSQRDGVLVF--SDGADAT--VPAVGIPGTGSTWQGAQDRWLPAVTYLSMAFPKAEWYVLVDDDTFLIPSNLKAMLSEQKIKNKKKGEEEIYIGRTMFVTPQE-GRLQGQM-LPFAHGGSGVVLSAALVREMVPLIMEVLVGERERCQGTGYGDGDLGLCIKVLRGV 359 L +GV++ + Q R V + TW +++ G +VF S+G+DA+ +P V +PG ++ + ++ K EW++ DDD ++ L++ L E +++G+T T +E G+L + F GG GV++S ++R MVP I GE R T + D ++G C++ GV Sbjct: 37 LFVGVMTAQKYLQSRAV-AVHRTWSSTI----PGKVVFFSSEGSDASLPIPIVSLPGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYVKGDKLESFL------RSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHI-----GECLREMYTTHEDVEIGRCVRRFAGV 215 The following BLAST results are available for this feature:
BLAST of NO17G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00570 ID=NO17G00570|Name=NO17G00570|organism=Nannochloropsis oceanica|type=gene|length=1584bpback to top protein sequence of NO17G00570.1 >NO17G00570.1-protein ID=NO17G00570.1-protein|Name=NO17G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bpback to top Synonyms
Publications
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