NO17G00550, NO17G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00550 vs. NCBI_GenBank
Match: EWM21170.1 (cleavage and polyadenylation specificity factor subunit 1, partial [Nannochloropsis gaditana]) HSP 1 Score: 611.7 bits (1576), Expect = 4.100e-171 Identity = 312/459 (67.97%), Postives = 359/459 (78.21%), Query Frame = 0 Query: 470 MGMSKK-AAVGVIDPRLIKTGERLTDFTSAKEEFLGGPPLPGVLAGGHQVFIVGGAPFGITSVLPLQPFERGLAM---XXXXXXXXXXXXXXXXXXXXXXDRFGKTMPSPAAFLPPLPEGSTGSYLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHARPGAVARAGAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGWRAGRKKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 +G SK+ A +D L KTGERLTDFTSAK E+LGGPPLP V AGGHQ+FI+GGAPFG+TSV+PL+PFERGLA+ +R+ P PA LPP T YL +GTCTVRAKGEDVPSKGRLL+YRI LDPY+ L +SPPTLTLVD+++QRSGPPTAIAQLG HIIIAAGPTLWV++FS REKLKPIAFYDADFYVVSL+VVK L+AVTDAYHSVHLL+WHE +PAHTLEL+GKDYSPIVSAQPGGSHFVVDPPSLG++VGD+RGN+Q+LQY ADVESRGGNRLVR+ DFHLSH++SF+QH R V R GA G+R+++FG+VEGGVGA+VP+EEK +RRLYALQ VMVNAL HV AFNPRGFRLVEARGW GRKKG LDGELLWRF L G+QEDLASAIGTSREM+L++L Sbjct: 30 LGASKRVGASAQVDVGLTKTGERLTDFTSAKAEYLGGPPLPAVWAGGHQIFIMGGAPFGVTSVIPLEPFERGLALMVYHRRSPSTPAFPPGPPSHQSHFRERYPNRAPPPAD-LPPFQAADT--YLAVGTCTVRAKGEDVPSKGRLLMYRISLDPYAGL------TSPPTLTLVDQYSQRSGPPTAIAQLGPHIIIAAGPTLWVYAFS-------------AREKLKPIAFYDADFYVVSLRVVKTLVAVTDAYHSVHLLRWHEHDPAHTLELMGKDYSPIVSAQPGGSHFVVDPPSLGMLVGDSRGNLQLLQYDPADVESRGGNRLVRRADFHLSHRLSFLQHTRMAEVPRPGAYRAGVRVMVFGSVEGGVGALVPVEEKVYRRLYALQAVMVNALPHVGAFNPRGFRLVEARGWAQGRKKGTLDGELLWRFAGLSVGKQEDLASAIGTSREMVLESL 466
BLAST of NO17G00550 vs. NCBI_GenBank
Match: XP_005853574.1 (cleavage and polyadenylation specificity factor subunit 1 [Nannochloropsis gaditana CCMP526] >EKU22784.1 cleavage and polyadenylation specificity factor subunit 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 544.3 bits (1401), Expect = 8.000e-151 Identity = 277/407 (68.06%), Postives = 319/407 (78.38%), Query Frame = 0 Query: 521 VGGAPFGITSVLPLQPFERGLAM---XXXXXXXXXXXXXXXXXXXXXXDRFGKTMPSPAAFLPPLPEGSTGSYLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHARPGAVARAGAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGWRAGRKKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 +GGAPFG+TSV+PL+PFERGLA+ +R+ P PA LPP T YL +GTCTVRAKGEDVPSKGRLL+YRI LDPY+ L +SPPTLTLVD+++QRSGPPTAIAQLG HIIIAAGPTLWV++FS REKLKPIAFYDADFYVVSL+VVK L+AVTDAYHSVHLL+WHE +PAHTLEL+GKDYSPIVSAQPGGSHFVVDPPSLG++VGD+RGN+Q+LQY ADVESRGGNRLVR+ DFHLSH++SF+QH R V R GA G+R+++FG+VEGGVGA+VP+EEK +RRLYALQ VMVNAL HV AFNPRGFRLVEARGW GRKKG LDGELLWRF L G+QEDLASAIGTSREM+L++L Sbjct: 1 MGGAPFGVTSVIPLEPFERGLALMVYHRRSPSTPAFPPGPPSHQSHFRERYPNRAPPPAD-LPPFQAADT--YLAVGTCTVRAKGEDVPSKGRLLMYRISLDPYAGL------TSPPTLTLVDQYSQRSGPPTAIAQLGPHIIIAAGPTLWVYAFS-------------AREKLKPIAFYDADFYVVSLRVVKTLVAVTDAYHSVHLLRWHEHDPAHTLELMGKDYSPIVSAQPGGSHFVVDPPSLGMLVGDSRGNLQLLQYDPADVESRGGNRLVRRADFHLSHRLSFLQHTRMAEVPRPGAYRAGVRVMVFGSVEGGVGALVPVEEKVYRRLYALQAVMVNALPHVGAFNPRGFRLVEARGWAQGRKKGTLDGELLWRFAGLSVGKQEDLASAIGTSREMVLESL 385
BLAST of NO17G00550 vs. NCBI_GenBank
Match: GAY05088.1 (Hypothetical protein PINS_012899 [Pythium insidiosum]) HSP 1 Score: 208.8 bits (530), Expect = 8.000e-50 Identity = 132/356 (37.08%), Postives = 191/356 (53.65%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKM-SFVQHA----RPGAVARAG------AMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 Y+V+GT V GED KGRLL+Y + Y++ ++G + P L L+ G + ++QLG H++ A G L V+ F ++L AFYDA Y+VSL V+K+ + D Y SVH L+W E+ L+LL KDY P+ + F V L ++ GD N+ ++Q+A D+ESRGG RL+R DFHL ++ S ++ A P A AG SQ + + G+ EG VGA++ + E+ FRRL+ LQ VM+N L CA NPR FR++++ G R GR KKG LDG +L+RF L Q++LA IGT+ E+I+ L Sbjct: 29 YVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTT-AEGETSAKLPKLRLIFIKEHHHGAISFVSQLGPHVLAAVGMKLIVYEFK--------------SDQLTACAFYDAQMYIVSLSVIKDYVMYADVYKSVHFLRWREKQ--RQLQLLAKDYEPLAIT---ATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNPREFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNL 364
BLAST of NO17G00550 vs. NCBI_GenBank
Match: ETI32630.1 (hypothetical protein F443_20594 [Phytophthora parasitica P1569]) HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48 Identity = 133/352 (37.78%), Postives = 183/352 (51.99%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHAR---PGAVARA----GAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 YLV+GT V GED +GRLL+Y + Y + G P L LV R G + ++QLG +++ A G L V+ F E+L AFYDA Y+V+L VVK+ + D Y SVH L+W E L LL KDY P+ + + F V L ++ D N+ ++Q+A D+ESRGG RL+R DFHL ++S + R PG+V A A + + GT EGGVGA+VP+ E+ FRRL+ LQ VMVN L CA NPR FR+++ R GR KK LD +L+RF L Q++LA IGT+ E+++ L Sbjct: 1410 YLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFK--------------SEQLIGCAFYDAQMYIVTLNVVKDFVMYGDVYKSVHFLRWREMQ--RQLVLLAKDYEPLAVS---ATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDAPGSVVSATNGRNAAPLSYYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNL 1742
BLAST of NO17G00550 vs. NCBI_GenBank
Match: ETK73008.1 (hypothetical protein L915_20009 [Phytophthora parasitica]) HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48 Identity = 133/352 (37.78%), Postives = 183/352 (51.99%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHAR---PGAVARA----GAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 YLV+GT V GED +GRLL+Y + Y + G P L LV R G + ++QLG +++ A G L V+ F E+L AFYDA Y+V+L VVK+ + D Y SVH L+W E L LL KDY P+ + + F V L ++ D N+ ++Q+A D+ESRGG RL+R DFHL ++S + R PG+V A A + + GT EGGVGA+VP+ E+ FRRL+ LQ VMVN L CA NPR FR+++ R GR KK LD +L+RF L Q++LA IGT+ E+++ L Sbjct: 1410 YLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFK--------------SEQLIGCAFYDAQMYIVTLNVVKDFVMYGDVYKSVHFLRWREMQ--RQLVLLAKDYEPLAVS---ATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDAPGSVVSATNGRNAAPLSYYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNL 1742
BLAST of NO17G00550 vs. NCBI_GenBank
Match: ETL26449.1 (hypothetical protein L916_19887 [Phytophthora parasitica]) HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48 Identity = 133/352 (37.78%), Postives = 183/352 (51.99%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHAR---PGAVARA----GAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 YLV+GT V GED +GRLL+Y + Y + G P L LV R G + ++QLG +++ A G L V+ F E+L AFYDA Y+V+L VVK+ + D Y SVH L+W E L LL KDY P+ + + F V L ++ D N+ ++Q+A D+ESRGG RL+R DFHL ++S + R PG+V A A + + GT EGGVGA+VP+ E+ FRRL+ LQ VMVN L CA NPR FR+++ R GR KK LD +L+RF L Q++LA IGT+ E+++ L Sbjct: 1410 YLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFK--------------SEQLIGCAFYDAQMYIVTLNVVKDFVMYGDVYKSVHFLRWREMQ--RQLVLLAKDYEPLAVS---ATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDAPGSVVSATNGRNAAPLSYYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNL 1742
BLAST of NO17G00550 vs. NCBI_GenBank
Match: XP_008897882.1 (hypothetical protein PPTG_05899 [Phytophthora parasitica INRA-310] >ETN16772.1 hypothetical protein PPTG_05899 [Phytophthora parasitica INRA-310]) HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48 Identity = 133/352 (37.78%), Postives = 183/352 (51.99%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHAR---PGAVARA----GAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 YLV+GT V GED +GRLL+Y + Y + G P L LV R G + ++QLG +++ A G L V+ F E+L AFYDA Y+V+L VVK+ + D Y SVH L+W E L LL KDY P+ + + F V L ++ D N+ ++Q+A D+ESRGG RL+R DFHL ++S + R PG+V A A + + GT EGGVGA+VP+ E+ FRRL+ LQ VMVN L CA NPR FR+++ R GR KK LD +L+RF L Q++LA IGT+ E+++ L Sbjct: 1410 YLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFK--------------SEQLIGCAFYDAQMYIVTLNVVKDFVMYGDVYKSVHFLRWREMQ--RQLVLLAKDYEPLAVS---ATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDAPGSVVSATNGRNAAPLSYYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNL 1742
BLAST of NO17G00550 vs. NCBI_GenBank
Match: ETO61376.1 (hypothetical protein F444_20609 [Phytophthora parasitica P1976]) HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48 Identity = 133/352 (37.78%), Postives = 183/352 (51.99%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHAR---PGAVARA----GAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 YLV+GT V GED +GRLL+Y + Y + G P L LV R G + ++QLG +++ A G L V+ F E+L AFYDA Y+V+L VVK+ + D Y SVH L+W E L LL KDY P+ + + F V L ++ D N+ ++Q+A D+ESRGG RL+R DFHL ++S + R PG+V A A + + GT EGGVGA+VP+ E+ FRRL+ LQ VMVN L CA NPR FR+++ R GR KK LD +L+RF L Q++LA IGT+ E+++ L Sbjct: 1410 YLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFK--------------SEQLIGCAFYDAQMYIVTLNVVKDFVMYGDVYKSVHFLRWREMQ--RQLVLLAKDYEPLAVS---ATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDAPGSVVSATNGRNAAPLSYYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNL 1742
BLAST of NO17G00550 vs. NCBI_GenBank
Match: ETP02469.1 (hypothetical protein F441_20468 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48 Identity = 133/352 (37.78%), Postives = 183/352 (51.99%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHAR---PGAVARA----GAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 YLV+GT V GED +GRLL+Y + Y + G P L LV R G + ++QLG +++ A G L V+ F E+L AFYDA Y+V+L VVK+ + D Y SVH L+W E L LL KDY P+ + + F V L ++ D N+ ++Q+A D+ESRGG RL+R DFHL ++S + R PG+V A A + + GT EGGVGA+VP+ E+ FRRL+ LQ VMVN L CA NPR FR+++ R GR KK LD +L+RF L Q++LA IGT+ E+++ L Sbjct: 1410 YLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFK--------------SEQLIGCAFYDAQMYIVTLNVVKDFVMYGDVYKSVHFLRWREMQ--RQLVLLAKDYEPLAVS---ATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDAPGSVVSATNGRNAAPLSYYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNL 1742
BLAST of NO17G00550 vs. NCBI_GenBank
Match: ETP30638.1 (hypothetical protein F442_20407 [Phytophthora parasitica P10297]) HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48 Identity = 133/352 (37.78%), Postives = 183/352 (51.99%), Query Frame = 0 Query: 590 YLVLGTCTVRAKGEDVPSKGRLLIYRIMLDPYSSLSKGGGPSSPPTLTLVDEFTQRSGPPTAIAQLGQHIIIAAGPTLWVFSFSXXXXXXXXXXXXXXREKLKPIAFYDADFYVVSLKVVKNLIAVTDAYHSVHLLKWHEENPAHTLELLGKDYSPIVSAQPGGSHFVVDPPSLGVVVGDNRGNVQMLQYAQADVESRGGNRLVRKVDFHLSHKMSFVQHAR---PGAVARA----GAMSQGLRLLMFGTVEGGVGAMVPLEEKAFRRLYALQGVMVNALMHVCAFNPRGFRLVEARGW-RAGR---------KKGMLDGELLWRFPSLPRGQQEDLASAIGTSREMILDTL 925 YLV+GT V GED +GRLL+Y + Y + G P L LV R G + ++QLG +++ A G L V+ F E+L AFYDA Y+V+L VVK+ + D Y SVH L+W E L LL KDY P+ + + F V L ++ D N+ ++Q+A D+ESRGG RL+R DFHL ++S + R PG+V A A + + GT EGGVGA+VP+ E+ FRRL+ LQ VMVN L CA NPR FR+++ R GR KK LD +L+RF L Q++LA IGT+ E+++ L Sbjct: 1410 YLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEHRQGAISMVSQLGPYVLAAVGSKLIVYEFK--------------SEQLIGCAFYDAQMYIVTLNVVKDFVMYGDVYKSVHFLRWREMQ--RQLVLLAKDYEPLAVS---ATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDAPGSVVSATNGRNAAPLSYYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNL 1742 The following BLAST results are available for this feature:
BLAST of NO17G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00550 ID=NO17G00550|Name=NO17G00550|organism=Nannochloropsis oceanica|type=gene|length=3248bpback to top protein sequence of NO17G00550.1 >NO17G00550.1-protein ID=NO17G00550.1-protein|Name=NO17G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1002bpback to top Synonyms
Publications
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