NO17G00530, NO17G00530 (gene) Nannochloropsis oceanica

Overview
NameNO17G00530
Unique NameNO17G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3691
Alignment locationchr17:192809..196499 -

Link to JBrowse

Properties
Property NameValue
DescriptionPlasma-membrane choline transporter family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:192809..196499 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO17G00530 vs. NCBI_GenBank
Match: XP_005855625.1 (hypothetical protein NGA_0598810 [Nannochloropsis gaditana CCMP526] >EKU20731.1 hypothetical protein NGA_0598810 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 591.3 bits (1523), Expect = 3.800e-165
Identity = 343/652 (52.61%), Postives = 411/652 (63.04%), Query Frame = 0
Query:   11 EDGRRAPNAPSIYPQQVPLEGYYXXXXXXXXXXXXXXXXXXXXXXXXPSYN---HQGVVVQGQPVYVHQPAHPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKPYLQSQPVNGGAGEGGDGGTADDMGADGEEGGGKQYQDVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWSIXXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKIGYDPIRRNVTRI 660
            ++ + APNAPS+YP QVP +G+Y                        P Y     Q ++VQGQPVYV QPA                                              + KP   +QP   GAGE G G TA    + G +    + QD WAA+LFLAH+GFIAYLAF  GL+ALRD DLTT++P  E   G      E  LT+VYIGLAVVL AA AWS LW GILLRNA+ IIT ALIG++ +S VG +LA +YGN  +AI+  +M AIQ MWYYCVRDRIPFASMNLKCSATA L+YPSILFLA ++T VQ+GW+L+WQLAA+GVA++KGAE+VVIEGTSF LS+C D      AGA   C C+R T +G++ L+ AGVC DLS F+  +SP+I+FLLFISLFWGSLVVKNV+FCSA+GMVADWWY+G+N GVV KSF R+ +TSFGSICFGSLILAVLRA+RQM                                  YA+VYC+ YGT FR SG KTF+LFKR G TAIINDDLAETAL +V+L+                 LG  W +             SL++MSVLDAGVATVFVVFAEDP+AFAQ+HP LY EL QAWAKIGYDP RR+VTR+
Sbjct:    8 DEWQNAPNAPSLYP-QVPPQGFY--------APPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPE-KPLPMTQPGKPGAGETG-GDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTD-----TAGA---CACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIXXXXXXXXXXXXXXXXXLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 640          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: EWM21181.1 (Choline transporter [Nannochloropsis gaditana])

HSP 1 Score: 591.3 bits (1523), Expect = 3.800e-165
Identity = 343/652 (52.61%), Postives = 411/652 (63.04%), Query Frame = 0
Query:   11 EDGRRAPNAPSIYPQQVPLEGYYXXXXXXXXXXXXXXXXXXXXXXXXPSYN---HQGVVVQGQPVYVHQPAHPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKPYLQSQPVNGGAGEGGDGGTADDMGADGEEGGGKQYQDVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWSIXXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKIGYDPIRRNVTRI 660
            ++ + APNAPS+YP QVP +G+Y                        P Y     Q ++VQGQPVYV QPA                                              + KP   +QP   GAGE G G TA    + G +    + QD WAA+LFLAH+GFIAYLAF  GL+ALRD DLTT++P  E   G      E  LT+VYIGLAVVL AA AWS LW GILLRNA+ IIT ALIG++ +S VG +LA +YGN  +AI+  +M AIQ MWYYCVRDRIPFASMNLKCSATA L+YPSILFLA ++T VQ+GW+L+WQLAA+GVA++KGAE+VVIEGTSF LS+C D      AGA   C C+R T +G++ L+ AGVC DLS F+  +SP+I+FLLFISLFWGSLVVKNV+FCSA+GMVADWWY+G+N GVV KSF R+ +TSFGSICFGSLILAVLRA+RQM                                  YA+VYC+ YGT FR SG KTF+LFKR G TAIINDDLAETAL +V+L+                 LG  W +             SL++MSVLDAGVATVFVVFAEDP+AFAQ+HP LY EL QAWAKIGYDP RR+VTR+
Sbjct:   71 DEWQNAPNAPSLYP-QVPPQGFY--------APPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPE-KPLPMTQPGKPGAGETG-GDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTD-----TAGA---CACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIXXXXXXXXXXXXXXXXXLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 703          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: XP_005853576.1 (hypothetical protein NGA_0598820, partial [Nannochloropsis gaditana CCMP526] >EKU22786.1 hypothetical protein NGA_0598820, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 569.3 bits (1466), Expect = 1.500e-158
Identity = 307/515 (59.61%), Postives = 365/515 (70.87%), Query Frame = 0
Query:  145 GGTADDMGADGEEGGGKQYQDVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWSIXXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKIGYDPIRRNVTRI 660
            G TA    + G +    + QD WAA+LFLAH+GFIAYLAF  GL+ALRD DLTT++P  E   G      E  LT+VYIGLAVVL AA AWS LW GILLRNA+ IIT ALIG++ +S VG +LA +YGN  +AI+  +M AIQ MWYYCVRDRIPFASMNLKCSATA L+YPSILFLA ++T VQ+GW+L+WQLAA+GVA++KGAE+VVIEGTSF LS+C D      AGA   C C+R T +G++ L+ AGVC DLS F+  +SP+I+FLLFISLFWGSLVVKNV+FCSA+GMVADWWY+G+N GVV KSF R+ +TSFGSICFGSLILAVLRA+RQM                                  YA+VYC+ YGT FR SG KTF+LFKR G TAIINDDLAETAL +V+L+                 LG  W +             SL++MSVLDAGVATVFVVFAEDP+AFAQ+HP LY EL QAWAKIGYDP RR+VTR+
Sbjct:    2 GDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTD-----TAGA---CACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIXXXXXXXXXXXXXXXXXLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 508          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: EWM24998.1 (Choline transporter [Nannochloropsis gaditana])

HSP 1 Score: 210.7 bits (535), Expect = 1.400e-50
Identity = 158/508 (31.10%), Postives = 241/508 (47.44%), Query Frame = 0
Query:  146 GTADDMGADGE-EGGGKQYQDVWAAILFLAHVGFIAYLAFGPGLRAL------RDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWSIXXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAK 647
            G     G++GE E     YQDVWA  LF+AH+  I +LAF  GL  L      RDN +  +  +V+             L  +  G  V    A   S L +  +L +A  +I  ALI  +A  +V AV A +     L I+  + AA+   +Y  VR+RI FAS NL  +  A+      + ++ L+ F Q+ W  +W LA  G  + +    V   G ++   EC      +    +  CVC+ +  +     T  G C       ++    ILFLL +S+FWGS+V++ +V C+ SG+VA+WW+ G   G    +F R++TTSFGSICFG+L L+++RA  Q+                                  YA  Y ++YGTSF  SGR  F LFK +G T +IND L     T +S   A+L  +VGY + + F L   +                 +++S++D+ VATVFV +A+  +   +  P LY  + +AW++
Sbjct:  173 GATTVAGSEGEVEPAATPYQDVWATFLFIAHLAIIFWLAFDWGLPLLEKDVDARDNAMQADVQSVQ----------NSSLVALTTGGTVCTLGAAVLSYLTLKCVLHHARALIRGALIATIAVQIVVAVAAMLASQLWLFILSCIFAALGLCYYRLVRNRIAFASENLHVATQAIGHASGPVLVSFLVVFCQLVWQFVWTLALVGALLPQKGFTVTQGGNTYGEFECE--TDFSYLHDSYVCVCSHNGAEEGETTTALGRC-----HVSSGPGFILFLLLVSMFWGSVVLQYIVHCTTSGVVAEWWFTGVRQGTTWPNFKRAVTTSFGSICFGALFLSIIRAAHQV--LLEMQKSKNNACTCVASCLLRLVDSIATYFNRYAFTYVAMYGTSFVESGRDAFALFKSKGLTVLINDQLVSNVFTFLSFGAAVLIALVGYGFAMAFGLDGGYKAVLAGVGFVVGLLVCAIVLSIVDSAVATVFVCWADAKDVLQKNAPELYAGMDKAWSE 661          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: OQS02637.1 (Intraflagellar Transport Protein [Thraustotheca clavata])

HSP 1 Score: 193.7 bits (491), Expect = 1.800e-45
Identity = 180/504 (35.71%), Postives = 245/504 (48.61%), Query Frame = 0
Query:  157 EGGGKQYQDVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQM-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLI------FRLG-----STWSIXXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAW 645
            E    +  D + A+LF+ H+  I YLAF  GL  L     T E  +  PA G       K LT V      ++ A+V +S LW+ +L+  A  +I  AL   V   L+G  +A ++ N  +  V L MAAI   + Y V++RI FAS NLK + +AV    SI  +A  L  VQV W  +W L+A GV      +V      +    E    P   A                                      + +F L IS+FWG  VV+NV+ C+ +G VA WWY+    G VG +  RSMT+SFGSICFGSLI+AVL AMR +                      XXXXXXXXXXXXX    +A  Y  +YG  FRTSG+   DLF  RG+TA+INDDLA TAL++ +L + +L+  +G L            LG     +T  +             ++++ ++L  G+ T+FV FAEDP +F +AHP  Y ELV AW
Sbjct:   31 EAASPKCNDWFFALLFVLHLVVIDYLAFTKGLDYLN----TFEKDHPSPAAG-------KSLTAVVGVSGGLIGASVLFSALWMKLLMAFAEHMIKFALWMNVG-MLLGFAVATLFVNPIMPFVFLFMAAINICYIYAVQNRIGFASANLKIACSAVGHNLSIFGVALFLLLVQVVWLGVWSLSAVGV-----YQVFRKSDPNCAAEEAHGQPCGGAGFG-----------------------------------VTMFFLLISVFWGQQVVQNVLTCTTAGTVATWWYHQNPQGGVGGALYRSMTSSFGSICFGSLIVAVLSAMRTVANAIKNQAAQDDNAALACVACLXXXXXXXXXXXXXYFNQWAYTYVGIYGFDFRTSGKAVMDLFNNRGWTAVINDDLASTALSIGALGVGILSCCIGLLVAQFAPIDWSAHLGQNVDHTTVFVILGTIGFIAGFSMAMILANLLITGLHTIFVCFAEDPMSFQRAHPEHYNELVVAW 482          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: XP_009837251.1 (hypothetical protein H257_11876 [Aphanomyces astaci] >ETV73376.1 hypothetical protein H257_11876 [Aphanomyces astaci])

HSP 1 Score: 189.1 bits (479), Expect = 4.300e-44
Identity = 154/503 (30.62%), Postives = 229/503 (45.53%), Query Frame = 0
Query:  163 YQDVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFT--TTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLY-------------------GLIFRLGSTWSIXXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAW 645
            ++D   AILFL ++G I  L    G      N L   S    P+     +    ++TT+    A +   A   S+  +   +R A ++I +AL  +V      A  A +  N T+AIV  ++      + Y V+DRIPFA+ NL+ +  A+ K+PS   +A +   VQ+ W  +W  A  G+  +K  E      TS           TA   +   C+   ++ Q L    T+GVC + +V+    + S +  F L +S FWG  V KN++  + +G VA WW++ ++ G  G S  R+ TTS GSICFGSLI+AVL+ +RQ+                                  +A VY  +YG  F  +GR    LF  RGF AIINDDL  TALT  +  +  L  ++G +Y                   GL F LG                  +++ M V+D+ VAT+FV FAEDP A   +HP  + EL+  W
Sbjct:   55 FRDWPFAILFLGNIGAIIVLLIMYGSTVF--NSLNGTSKTAFPSSSSTFS--SDNVTTILYLCAGLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVMFFGFAAFAVIKKNYTVAIVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHLVAFVFLLVQIAWVFVWAFAVVGIT-NKLTENSTPAPTS----------RTATVASGGRCI---ASAQCLTNYCTSGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGATGASLGRATTTSLGSICFGSLIVAVLQTLRQL---AEEASRQGDCAACIAQCILGCLQSLMETFNRWAFVYVGIYGYKFMDAGRAVMQLFHDRGFDAIINDDLVGTALTFAAFGVGCLCALLGLVYYYIDVSNQFQYAEYILPLTGLFFGLG-----------------VAIIPMGVVDSAVATIFVCFAEDPVALQHSHPEHFNELMTEW 519          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: OQR95213.1 (hypothetical protein ACHHYP_00183 [Achlya hypogyna])

HSP 1 Score: 185.3 bits (469), Expect = 6.300e-43
Identity = 171/493 (34.69%), Postives = 245/493 (49.70%), Query Frame = 0
Query:  163 YQDVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAA-----AGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWS---IXXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKI 648
            Y+D   AILF+ +V  +  L    G+  L++   T+   N            +K++ TV I    +   A   S + +  ++R AS +IT +L   V  +++    A +     LAI+  + A +   + Y VRDRIPFA+ NL+ +A A+ K+ S   +A     +Q+ W  +W  AA G+A                LSE +D P  A      A  T S  CA +             C   S+ +T  S +  F + I+ FWG  VVKNV   + +G VA WWY+  + G  G S  RS+TTSFGSIC GSLI+A+L+A+RQ+            XXXXXXXXXXXXXXXXX     +A VY  +YG  F  +G+    LF+ RGF AII DDL   AL   SL + +L   +G +Y  I    +T++   I             S++  SV+D+ VATV V FAEDP A   +HP  + EL+  W ++
Sbjct:   45 YRDWPFAILFIGNVVAMIVLLVTWGIPVLKNTSGTSSKSN------SNSLLSDKEMRTVLIYSGAMAVVAAVLSFVMLSFMVRFASGMITFSLWFGVGLNVIFLGYALVKQQYALAIIAAIFALLSLCYAYAVRDRIPFAAANLRTAAGAIKKHASTYCVAFTSLIMQIIWVGIWATAALGLA--------------NHLSESQDSPVNAGGLANNAKCTYSYQCASNN-------CVKNYCEAPSLKST--SYVAYFFMLIAFFWGLTVVKNVTHATVAGTVATWWYSNNSDGATGASLKRSLTTSFGSICLGSLIVAILQALRQL---AEEARRQGDXXXXXXXXXXXXXXXXXEYFNRWAFVYVGIYGYKFTDAGKAVIGLFRDRGFEAIIADDLIGNALGFSSLGVGILCAGLGLIYTYIDTANTTFANAQIIIPIIGLFIGVGISVIPFSVIDSAVATVIVCFAEDPAALQMSHPEHFTELMTEWHRM 505          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: XP_009516302.1 (hypothetical protein PHYSODRAFT_552564 [Phytophthora sojae] >EGZ29027.1 hypothetical protein PHYSODRAFT_552564 [Phytophthora sojae])

HSP 1 Score: 183.7 bits (465), Expect = 1.800e-42
Identity = 159/497 (31.99%), Postives = 228/497 (45.88%), Query Frame = 0
Query:  169 AILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQM-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYL------YGLIFRLGSTWSI--XXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKIGYDPI 653
            A LFL++V  +A LAF  G+ AL+++     S    P  G   AG           +AV+       S+ WI +L+  A+ +I VAL   V   L  AV  F   NA  A+  L+MAAI   + Y V++RI FAS NLK + TA+ ++ S+  +A +L   Q+ W  +W +AA G+                FL    D              C R            G+C  L  +      + LF + +S++WG  V++N++ C+ +G+VA WWY          +  RS+TTSFGSICFGSLI+AVL+A++ M                                       +A VY  VYG  FRTSG+   DLF  RG+TA+INDDL   AL+  +L I ++T  VG L            LGS  S+               +L++  V+ A + T+FV FAEDP AF + HP  Y +LV  W +   D +
Sbjct:   47 AALFLSNVVALAALAFWKGVPALKEDMGRNRSDGRVPT-GHSVAGTM---------IAVLCVLGTLLSLAWIKLLMAYAASMIRVALWLNVFMVLGFAVTTFSV-NAWAALAFLLMAAINVWYIYAVQNRIGFASANLKAACTALKQHSSVFAVAFVLVLQQLAWMFLWAVAALGM-------------HQIFLEADPD--------------CDREIDLASRGRNHGGLCVGLPAY------VALFYMLVSVYWGQQVLQNILTCTTAGVVATWWYQPHAQKATVGALYRSVTTSFGSICFGSLIVAVLQALKTMANMARRRANEENNNGLACLACMAECIVSCLADIMEYFNQWAYVYVGVYGYPFRTSGKAVMDLFNNRGWTAVINDDLTSGALSFGALGIGIVTCCVGLLMVRFSPVEWFTALGSRMSVYGTMALIGFMVGFTMALILAHVIIAALHTIFVCFAEDPVAFNRNHPKEYDDLVSGWRQFHGDAL 499          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: CCI50081.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 180.6 bits (457), Expect = 1.500e-41
Identity = 144/507 (28.40%), Postives = 230/507 (45.36%), Query Frame = 0
Query:  165 DVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYG----NATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGV-AISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQM-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWSI---------XXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKIGYDPI 653
            D+WAAILFLA V  I + A   GL A+ D             E  +      D    +I L  +    VA S  W+ +L+  A  +I V L        VG V+ F  G    +   +++ L++AA+   + Y V++RI FAS NLKC+ T++LK+  + ++A  L   Q+ W  +W  +A G+  + K +              C+D                +  T+   ++  +G C  +       +  ILF + +SL+WG  V++N++ C+ +G+VA WWY     G+   +  RS+TT+FGSIC GSL +++L+AM+ M                                       +A +Y  +YG  FRTS +   DLF+ RG+TA+INDDLA +ALT  ++ +  +   +G++  + F   S +                        S+ + +V+ A + TVFV FAEDP A    HP  Y +L+  W +   D I
Sbjct:   22 DLWAAILFLAQVIVIGFFAVWKGLPAVLDQ-----------MENSQHGHKNYDFQNFFILLLGIFGLTVALSGFWMKLLMSYAESMIRVTL-----WCNVGLVIVFGLGTFPVSPVSSLIFLMLAAVNICYIYAVQNRIGFASANLKCACTSILKFSGVFWVALALVIQQIFWLTVWSTSAIGIYGMFKESH-----------PNCQDF--------------LKGNTKN--DIAASGDCGGIG------TGFILFAMLVSLYWGQQVLQNILTCTVAGVVASWWYRSGEDGITVGALYRSVTTAFGSICLGSLFVSILQAMQAMARMLREKAQEEDNAALACVGCIAECILGCLESIMEYLNMWAYIYVGIYGRDFRTSAKAVMDLFRGRGWTAVINDDLASSALTFGAIGVGCVACSIGFI-AVYFSPVSWFDFFGTKKAGYGVIGAGAFIAGTSVSMTMANVVLAALHTVFVCFAEDPIALQHNHPREYEDLISGWRQFHSDAI 478          
BLAST of NO17G00530 vs. NCBI_GenBank
Match: CCI50082.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 180.6 bits (457), Expect = 1.500e-41
Identity = 144/507 (28.40%), Postives = 230/507 (45.36%), Query Frame = 0
Query:  165 DVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYG----NATLAIVCLVMAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGV-AISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQM-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWSI---------XXXXXXXXXXXXXSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKIGYDPI 653
            D+WAAILFLA V  I + A   GL A+ D             E  +      D    +I L  +    VA S  W+ +L+  A  +I V L        VG V+ F  G    +   +++ L++AA+   + Y V++RI FAS NLKC+ T++LK+  + ++A  L   Q+ W  +W  +A G+  + K +              C+D                +  T+   ++  +G C  +       +  ILF + +SL+WG  V++N++ C+ +G+VA WWY     G+   +  RS+TT+FGSIC GSL +++L+AM+ M                                       +A +Y  +YG  FRTS +   DLF+ RG+TA+INDDLA +ALT  ++ +  +   +G++  + F   S +                        S+ + +V+ A + TVFV FAEDP A    HP  Y +L+  W +   D I
Sbjct:   37 DLWAAILFLAQVIVIGFFAVWKGLPAVLDQ-----------MENSQHGHKNYDFQNFFILLLGIFGLTVALSGFWMKLLMSYAESMIRVTL-----WCNVGLVIVFGLGTFPVSPVSSLIFLMLAAVNICYIYAVQNRIGFASANLKCACTSILKFSGVFWVALALVIQQIFWLTVWSTSAIGIYGMFKESH-----------PNCQDF--------------LKGNTKN--DIAASGDCGGIG------TGFILFAMLVSLYWGQQVLQNILTCTVAGVVASWWYRSGEDGITVGALYRSVTTAFGSICLGSLFVSILQAMQAMARMLREKAQEEDNAALACVGCIAECILGCLESIMEYLNMWAYIYVGIYGRDFRTSAKAVMDLFRGRGWTAVINDDLASSALTFGAIGVGCVACSIGFI-AVYFSPVSWFDFFGTKKAGYGVIGAGAFIAGTSVSMTMANVVLAALHTVFVCFAEDPIALQHNHPREYEDLISGWRQFHSDAI 493          
The following BLAST results are available for this feature:
BLAST of NO17G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855625.13.800e-16552.61hypothetical protein NGA_0598810 [Nannochloropsis ... [more]
EWM21181.13.800e-16552.61Choline transporter [Nannochloropsis gaditana][more]
XP_005853576.11.500e-15859.61hypothetical protein NGA_0598820, partial [Nannoch... [more]
EWM24998.11.400e-5031.10Choline transporter [Nannochloropsis gaditana][more]
OQS02637.11.800e-4535.71Intraflagellar Transport Protein [Thraustotheca cl... [more]
XP_009837251.14.300e-4430.62hypothetical protein H257_11876 [Aphanomyces astac... [more]
OQR95213.16.300e-4334.69hypothetical protein ACHHYP_00183 [Achlya hypogyna... [more]
XP_009516302.11.800e-4231.99hypothetical protein PHYSODRAFT_552564 [Phytophtho... [more]
CCI50081.11.500e-4128.40unnamed protein product [Albugo candida][more]
CCI50082.11.500e-4128.40unnamed protein product [Albugo candida][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004769NSK004769Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00530.2NO17G00530.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G00530.1NO17G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600204gene_7833Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100111g13gene9253Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00530.2NO17G00530.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G00530.1NO17G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00530 ID=NO17G00530|Name=NO17G00530|organism=Nannochloropsis oceanica|type=gene|length=3691bp
AGGAAAAGCCAACGgtagagagagtgttagagcaaggggaatacccagta
cagacaagcagggggaatggaacggaaggggagggcggcaagagaagggc
ggcaagtaagagggagggcgacaagcaagagggaaacggagcaggagcac
tgtaattcaagacaagacgtaccatctagaagatcgctcaaccgcgtcaa
gtttgccttgccaaacatggtggctttggcagcttgagtatcggcgcttc
gtctgccgcgtacttgttggagggaaagggtgaggtgtttagggggtgga
gaagcgagccgatttcaactttgctttcggtatagagagtgtacgcctgg
cattttctttgctcttgcctagtgctccgccctctccaacacccaaaatg
aaacgaaagcaagcaaccccattcccattttttcccatttctattgtttc
cttagaagtgtaaggtttggggttacgcgcaatattttcaacggccagtt
gtcggttgctccctcctcatatgcccgattgcgaccctgtgaccttgctg
catgttgacagtgtccgcattgtccacaactagtacattctaatcttgtc
gtgcattggactgaagggaagcgtggtgcaatcttgtcgaatttccttcc
ctgtccgagctaatccacatgagcaactccagcaccgtcgtcatcgaagt
aactccccaatatttgccccctcccccacctagGCGAAGCACCCCTCGAC
CAGGCCATGGTATACCCCAACAAAGATGAATTTGGCGAGGATGGACGTCG
CGCCCCGAACGCGCCGTCCATCTATCCCCAGCAAGTTCCCCTCGAGgtac
gtggtgattccacgcactcttgttcctgctgagcaagttctccatttata
gattctcatcctccacgtaacgcttgtggcatgaccccatgcattcccat
ccacgctcacccaactaactattgatcacagGGATACTACATGAACCACC
CACCTGAGCAACACCACTATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCACGCTCCCTCGTACAACCATCAAGGCGTAGTCGTGCAAGGGCA
GCCTGTGTACGTGCACCAGCCAGCGCATCCCCAAGGCTACTATTACCCCC
CGCAGCAAGCCCAGGCAATGTACCCTCCCTCCCACCATCCCCAGCAACAC
CACAAAATGAGTGCCGTGGAAATGCAACAGTACCAGCGTGATCAGCAGCA
TCAGCAGCAGGGAAAAGGCAAGCCTTATCTACAGTCTCAACCTGTCAATG
GCGGGGCAGGGGAAGGAGGTGACGGCGGCACGGCGGATGACATGGGAGCA
GATGGAGAGGAAGGAGGGGGCAAGCAGTACCAAGATGTGTGGGCGGCGAT
CTTGTTTTTGGCTCATGTGGGTTTCATTGCTTACCTTGCCTTCGGGCCCG
GTTTGAGGGCGTTAAGGGACAATGATCTGACGACAGAAAGCCCGAATGTA
GAACCGGCCGAGGGAGGGGAGGAGGCGGGGATGGAGAAAGATTTGACGAC
GGTTTACATCGGTCTGGCGGTGGTGTTGGCAGCGGCGGTTGCCTGGTCTG
TGTTGTGGATCGGGATTTTGTTGAGGAATGCGTCGAGAATTATCACAGTC
GCGCTCATAGGGGCTGTTGCGACTTCGTTGGTGGGAGCGGTGCTGGCGTT
CATGTACGGCAATGCTACCTTGGCGATTGTGTGTTTGGTTATGGCGGCCA
TTCAGGGCATGTGGTATTATTGTGTGCGGGATCGAATCCCCTTCGgtacg
tacggagggagggagtgaatgaaaaagggagggaagagtagaagaaccag
cactcaacgcctgttaccgaagacaggctcatgacttatctctccttcct
gcctctctcccctccttccttccctccttccctccctccgttcccttttt
ctcccttttcagCCTCCATGAACCTCAAGTGCTCGGCCACGGCTGTGTTG
AAATACCCCTCCATCCTCTTCCTCGCCGGCCTGCTGACTTTTGTCCAGGT
TGGATGGTCCCTCATGTGGCAACTGGCTGCATTTGGCGTCGCTATTAGCA
AGGGGGCCGAGGTAGTGGTCATCGAAGGAACCTCCTTCTTCCTGTCTGAA
TGCCGCGATGTCCCAGCGACAGCAGCAGCAGGCGCGACGGCCAGCTGTGT
CTGTGCCCGCTCGACGACTCAGGGACTCTTGGAATTGACGACAGCGGGCG
TATGCACAGACTTGAGTGTTTTCACGACCACAATCTCTCCGATCATCCTG
TTCCTCCTCTTCATTTCCCTGTTTTGGGGCAGTCTGGTGGTGAAAAACGT
GGTGTTCTGCTCGGCGTCGGGCATGGTGGCGGATTGGTGGTACAACGGAG
AGAACACAGGTGTAGTGGGGAAATCGTTCTCGAGGTCCATGACTACCTCG
TTTGGCTCCATTTGCTTCGGGTCCCTGATCCTGGCCGTGTTGCGGGCGAT
GCGGCAGATGCTGAATCAGGGCCGGCGACAGGGGCAGCAGCAAAATGCTT
GCACGTGCATTGTGCAGTGCTTGATGGCAATTATCGAGCGGTTGATGCAG
ATCTTTAATCGgtgaggagggagggagggaagggaggaaagagggaggga
gaaatatattttgaacgaaagaattgaaacggcaggagggtcatgcacag
acactcactctccctccctccctccctccctccctctctttcccaacagC
TACGCCCTTGTTTACTGCTCTGTCTACGGCACCAGCTTCCGGACATCCGG
CAGGAAGACGTTCGACTTGTTCAAGCGGCGTGGTTTCACTGCTATTATCA
ACGATGACCTGGCCGAGACGGCGCTTACTATGGTTTCCTTGGTGATTGCG
CTCTTGACGGGTGTGGTGGGCTATTTGTATGGCTTGATTTTCCGGCTGGG
GAGCACGTGGTCGATCATCCTGGGAGTGGTGGGTTTCGTTGGCGGGTTGC
TCCTGAGTTTGGTCATAATGTCTGTGTTGGATGCGGGGGTGGCGACGGTT
TTCGTTGTGTTTGCCGAGGATCCCGAGGCCTTTGCACAGGCCCATCCTAC
CTTATATGGGGAGTTGGTGCAGGCCTGGGCGAAGATTGGTTATGACCCGA
TTAGGAGGAATGTTACGAGGATTTAAGGGAGGGAGTCGATGTCTGACGTA
GGGGTAGGGTAAATTGTTGTGATGAAGGGGAAGAGAGAACAAGATAGGGT
TGGTTTAAGACATGGAATGTCATGTGCCACCATAGATGCATGTTCTACCT
GAAGATCACGTCCCGTGTGTCAGAAAAAAAACACTGAAAAAAATGAGAAA
AAGCAGAAGTTGTAGTAGTTGTAGTGGCAGCAGGAGCAGCTCAAGAGGTG
GCGTGGGTCATGGAGAAGCAGGAGAGGTGGAAAAGGAAAGGGAAGAAAAA
TAACGAATAAAGGGTAAATATTGATCATCACATTACTGAAAATTGCACAT
GCATGGGACAGAGCAAGAGTACGGGATAATATATAGCGCATTTGTGACTT
CCGCGTTCATTTAGAGAATAGAATCATTAAACCACGCCCGCGAGGGAAAG
TACACGTGGGTAGATTGGGTTATGCATGAGAAGAGACAAGGGCGAAAGCA
GTCAAACATTTGGATGAATGAAGTACGATTTATATGAAAGA
back to top

protein sequence of NO17G00530.2

>NO17G00530.2-protein ID=NO17G00530.2-protein|Name=NO17G00530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=660bp
MVYPNKDEFGEDGRRAPNAPSIYPQQVPLEGYYMNHPPEQHHYQQQQQQQ
QQQQQHAPSYNHQGVVVQGQPVYVHQPAHPQGYYYPPQQAQAMYPPSHHP
QQHHKMSAVEMQQYQRDQQHQQQGKGKPYLQSQPVNGGAGEGGDGGTADD
MGADGEEGGGKQYQDVWAAILFLAHVGFIAYLAFGPGLRALRDNDLTTES
PNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAVAWSVLWIGILLRNASRI
ITVALIGAVATSLVGAVLAFMYGNATLAIVCLVMAAIQGMWYYCVRDRIP
FASMNLKCSATAVLKYPSILFLAGLLTFVQVGWSLMWQLAAFGVAISKGA
EVVVIEGTSFFLSECRDVPATAAAGATASCVCARSTTQGLLELTTAGVCT
DLSVFTTTISPIILFLLFISLFWGSLVVKNVVFCSASGMVADWWYNGENT
GVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQMLNQGRRQGQQQNACTC
IVQCLMAIIERLMQIFNRYALVYCSVYGTSFRTSGRKTFDLFKRRGFTAI
INDDLAETALTMVSLVIALLTGVVGYLYGLIFRLGSTWSIILGVVGFVGG
LLLSLVIMSVLDAGVATVFVVFAEDPEAFAQAHPTLYGELVQAWAKIGYD
PIRRNVTRI*
back to top

protein sequence of NO17G00530.1

>NO17G00530.1-protein ID=NO17G00530.1-protein|Name=NO17G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=627bp
MNHPPEQHHYQQQQQQQQQQQQHAPSYNHQGVVVQGQPVYVHQPAHPQGY
YYPPQQAQAMYPPSHHPQQHHKMSAVEMQQYQRDQQHQQQGKGKPYLQSQ
PVNGGAGEGGDGGTADDMGADGEEGGGKQYQDVWAAILFLAHVGFIAYLA
FGPGLRALRDNDLTTESPNVEPAEGGEEAGMEKDLTTVYIGLAVVLAAAV
AWSVLWIGILLRNASRIITVALIGAVATSLVGAVLAFMYGNATLAIVCLV
MAAIQGMWYYCVRDRIPFASMNLKCSATAVLKYPSILFLAGLLTFVQVGW
SLMWQLAAFGVAISKGAEVVVIEGTSFFLSECRDVPATAAAGATASCVCA
RSTTQGLLELTTAGVCTDLSVFTTTISPIILFLLFISLFWGSLVVKNVVF
CSASGMVADWWYNGENTGVVGKSFSRSMTTSFGSICFGSLILAVLRAMRQ
MLNQGRRQGQQQNACTCIVQCLMAIIERLMQIFNRYALVYCSVYGTSFRT
SGRKTFDLFKRRGFTAIINDDLAETALTMVSLVIALLTGVVGYLYGLIFR
LGSTWSIILGVVGFVGGLLLSLVIMSVLDAGVATVFVVFAEDPEAFAQAH
PTLYGELVQAWAKIGYDPIRRNVTRI*
back to top
Synonyms
Publications